Ostrea edulis (European flat oyster): 125658312
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Entry
125658312 CDS
T09123
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1-like isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125658312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125658312
03032 DNA replication proteins [BR:
oed03032
]
125658312
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
125658312
Prokaryotic type
125658312
DNA replication proteins [BR:
oed03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
125658312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
Pus10_C
CENP-N
FancD2
UPF0113
DUF3464
Motif
Other DBs
NCBI-GeneID:
125658312
NCBI-ProteinID:
XP_056005917
LinkDB
All DBs
Position
9:complement(25417670..25432682)
Genome browser
AA seq
548 aa
AA seq
DB search
MADTEHKKKKRKSGAIDVAEVQQTENFLLKPSSVVEQLDTSQWPLLLKNFDKLNVRTAHY
TPIPAGCSPLKRPIQEYIKSGFINLDKPANPSSHEVVSWVKRILRVQKTGHSGTLDPKVT
GCLIVCVERATRLVKSQQGAGKEYVCIFKLHSVVNDEKLVAQKIEMMTGALFQRPPLISA
VKRQLRIRTIYEVKMTEYNKEDAMGIFWVSCEAGTYIRTMCVHLGLFLGVGGQMQELRRV
RSGIMSEKANLFTMHDVLDAQWIYDNHKDESYLRRVINPLEALLTSHKRIIMKDTAVNAV
CYGAKIMLPGVLRYEDGIEVDEQIVIVTTKGEAVALAIAQMTTAVMATCDHGMVAKIKRV
VMERDTYPRKWGLGPMALQKKKMILAGTLDKYGKPNEKTPANWKKGYEDFNIKKEPVDGT
PQPVNSNKRKKESSSSDESEPPSPKPTVVENDQTEKKKKKKKKKDKDQEADEAEGAPEVR
VKVPRSMFFEIQIQVFFTVEGLILLCAILKKHVSDPKSITMKTKFMWSAHYDITNEVVTA
ILLNVHSE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcggatactgaacacaagaagaaaaagaggaagagtggtgctatagatgttgcggaa
gttcaacagacagaaaatttccttctgaagccctccagtgttgtggaacagctggacaca
tcacaatggccactactgcttaagaattttgacaaattgaatgtacggactgctcactac
accccaattccagcaggctgttctccactgaagagaccaatacaggaatacattaaaagt
ggattcattaatcttgacaaaccagctaatccatcatcgcatgaagttgtatcatgggtg
aagagaattcttcgagtacagaagacagggcacagtggtacactagaccccaaggtcacg
ggctgtctcattgtctgtgtagaacgagccactcgactggttaagtcgcagcagggagct
ggcaaagagtatgtctgtatcttcaagcttcacagtgtcgtcaatgatgaaaagcttgtg
gcacagaaaatagagatgatgacaggggcactcttccagaggcctccattgatttcagct
gttaagcgacagctgagaattcgaactatttatgaagtcaagatgacggagtacaacaaa
gaggacgcaatgggtattttctgggtgagctgcgaggctggcacatacattaggaccatg
tgtgtacatcttggtctctttttgggggtcgggggacaaatgcaggagctcagacgagtt
agatctggtatcatgtctgaaaaggcaaatttattcaccatgcatgacgttttggatgca
caatggatctatgacaaccataaggatgagtcgtacttaagacgagtgatcaacccattg
gaggctttactaacatcacacaaaaggatcattatgaaagacacggcagttaatgcagta
tgctatggagctaaaattatgttgcctggtgttcttagatacgaggatggaattgaagta
gatgaacaaattgtcatagtaacgacaaaaggagaggctgttgctttagccattgcccag
atgacaacagcagtcatggcaacctgtgatcatggtatggtggccaagattaaaagggtt
gttatggagagggacacatatccaaggaaatggggacttggacctatggcactgcagaag
aaaaaaatgattctagcaggaacactggataaatatggcaaacctaatgagaagacaccg
gccaactggaagaagggttacgaagacttcaacataaagaaagaacctgtagatggtact
ccacaaccagtgaactcaaacaagagaaagaaggaatccagcagttctgatgagagtgag
ccaccctcacccaagccaactgtggtggaaaatgaccagacagagaagaagaaaaagaaa
aaaaagaagaaggataaagaccaggaggctgatgaagctgagggtgctccagaggtaagg
gtcaaggtcccaaggtcaatgttttttgaaatacagatacaggtctttttcactgtagaa
ggccttattttactctgtgcaattttaaaaaaacatgtaagtgatcctaaatccattact
atgaaaacaaaattcatgtggagtgcacactatgacatcacaaatgaagtcgttactgct
attttgttaaatgttcattctgaatag
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