Ostrea edulis (European flat oyster): 125658489
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Entry
125658489 CDS
T09123
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125658489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oed03032
]
125658489
Enzymes [BR:
oed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125658489
DNA replication proteins [BR:
oed03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
125658489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
125658489
NCBI-ProteinID:
XP_056004368
LinkDB
All DBs
Position
9:7306793..7345435
Genome browser
AA seq
1445 aa
AA seq
DB search
MAPAPENDSRTDDQDDTIVADQGLAKSRSRREKKDKGGRFAALEKLKKAKQSGEKHKYDV
EEEKNVYDVVNEDEYSEIVRQRQDDDWIVDDDGAGYVEDGREIFDDDLNEDPTVSKGKKE
DKKKSKNPNIVRPGTKPKTTIKSMFAAQTSTGGSKLKSEKDVSLANDDLLGDLMEELHQG
PSEGMMKPLPIKLKKKGFCATKSPLNPFNTNVPSTGAQATKKKTVVMAEPRTPLIKSERR
PLPKPNIPEPEEAMDEVDSMTVGVEITTKTQKDADIQHLSDSQDDAALMDLNDMDFEEDL
VIKKEETVVCTSSVKPKTAIGSIPSETLSTGWENYQNDSQEESAVEVKVDTSELPLVTSA
SGDQVLRFFWLDAYEDPYNNPGTVFLFGKVWIEKAKVYVSCCVTVKNIERRMYVLPRATR
KNTKTGNDTGVDVTLVDVYTEFNEKVAEKFKIPKFKSKKITKQYAFEKTDVPVESDYLEI
RYGAEIPPLPRDLEGDTFSHVFGTHTSCLELLLIDSKMKGPGWLDLKFPHLVNPPVSWCK
IEVSISKTEHLLVTNDQHLTPPPLVVMTLNLRTLPNHKTHQNEIVAATCLVQEKFNIDKP
APKNPFQQHFCVLTKPSDSLFPFDFREKLQKEGKKLKVEMLPTERALMGFILAKIHKVDP
DVIVGHDIFGFDLDLILHRINANKVPHWSKIGRLKRTKMPKLSGPGHRGFADKSAACGRL
VCDIKLSAKELIRSRSYDLTELTNVILKAKRQELDYDQIHNMYLSSQQLLQLLELTLMDS
TYILRILFELNVLPLGLQITNICGNVMTRTLLGGRSERNEYLLLHAFTEKNFIVPDKEYK
KTTVKENMDDFEADDGGKGGKSSGRRKPAYAGGLVLDPKKGFYDKYILLLDFNSLYPSII
QEFNICFTTVSRTAVQQGGQDDEDQIIELPDKDLEPGILPTEIRKLVESRRQVKQLMKGD
ISNEQYMQYDIRQKALKLTANSMYGCLGFSHSRFFAKPLAALVTAKGREILMKTKDLVQT
MNLEVIYGDTDSIMINTNCNDIDAVYKVGNKVKSEVNKLYRLLEIDIDGVFKSMLLLKKK
KYAALSISKGPDGKYTEHKELKGLDIVRRDWSDLAKEAGNYVVEQILSGDSRETIVENIH
TKLMEVGEKVRNGKVAVELYHITKQLTKNPEDYPDKKSLPHVQVALRVNSKGGKKMKAGD
TVAYIICEDGSSLAASQRAYHPEELAKSDTLTVDTKYYLSQQVHPVVSRLCDPIEGTDAA
HLAECLGLDPSGYKHAVHYDEEEEALMNGTEISDEEKYRDCERFKFVCPGATCSREIIVD
AVFMGAEEFTECSVSICPNKECRTDMKDHVPYISNRLQMDIRRHIQKYYQGWLKCEDAAC
GTVTRKVPLTFQRGHPVCHACHRGLLHPLYTDTMLYTQLCFYEHIFDAERALKGMTDGSK
EKCKL
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagcacctgaaaacgacagccgaacagatgatcaagacgacacgatagtagct
gaccagggattagcaaaatctcgttctcgtagagaaaagaaagataaaggtggaagattt
gcagcccttgaaaagttaaagaaagctaagcagtcaggggagaagcacaaatatgatgtt
gaggaggaaaagaatgtatatgatgttgttaatgaagacgagtattccgagattgttcgc
cagcgtcaggatgatgactggattgtagatgatgatggagccggttatgtggaagatgga
cgagagatttttgacgatgacctcaatgaagacccaacagtctccaaagggaagaaagag
gataaaaagaagagcaagaatcctaacattgtgagaccagggaccaagcctaagacaacc
attaaatccatgtttgctgctcagacctcgactggagggtccaaactcaaatcagagaag
gatgtgtcgttggctaatgatgatttactaggggatctcatggaggagcttcaccagggg
ccctcagagggaatgatgaagcctctgcccatcaaactgaagaagaaaggattttgtgct
accaaatcccctttgaacccattcaacacaaatgtaccatctacaggagcacaggctacg
aagaagaaaactgttgttatggcagaaccaaggacgcctctgatcaagtccgagcgcagg
cctctacctaaacccaatattccagagccggaggaggccatggatgaggtagattctatg
actgttggagtagaaatcactactaaaactcaaaaagatgctgacattcaacacctatct
gacagtcaagatgatgctgcgttaatggatttaaatgatatggactttgaggaagacctt
gtaatcaaaaaggaagaaacagttgtttgtacatcgtcagtaaaaccaaaaacagcaata
ggatccattccctctgaaacactttccactggatgggagaactatcaaaatgattcccag
gaggagtctgcagtagaggtcaaggttgacacttcagagttgccattggttacctctgcc
agtggagatcaagtactacgttttttttggctggatgcttatgaagacccatataataat
ccaggaaccgttttcttgtttggaaaagtttggatagaaaaagccaaagtctatgtcagt
tgttgtgtgactgtgaagaatattgagagaagaatgtatgttcttccaagggctacgaga
aaaaatacaaagaccggaaatgacacaggagtagatgttactttggtggatgtttacaca
gaatttaatgagaaagtagcagagaaattcaaaataccaaagttcaagtcgaagaaaata
accaaacagtatgcatttgagaaaactgacgttcccgtggaatctgattatctggagatc
agatatggggcagaaataccacctttaccccgcgatttggaaggggatacatttagccat
gtgtttggaactcacacttcttgcttggaacttttgctcattgattccaaaatgaaagga
cctggatggctagatttgaagtttcctcatttggtgaacccccctgtaagctggtgcaaa
atagaggtcagcattagtaagacggagcacctgttggtgaccaatgatcaacatttgacc
ccaccacctttggttgtcatgacattgaatctcaggacactcccaaatcacaaaacccat
caaaatgagattgtagctgcaacgtgtctggttcaggaaaaattcaatattgataaacct
gcacccaaaaatccattccaacagcacttctgtgttcttacaaagccaagtgatagtcta
tttccatttgactttcgagaaaaacttcagaaagagggtaagaagttgaaagtagaaatg
cttccaacagaacgagctttaatgggattcattctggccaagattcacaaagtagaccct
gacgtcatagtgggacatgacatctttggattcgacctggatctgatccttcacagaata
aatgccaacaaagtaccccactggtctaagattggaagactgaaaagaacaaagatgcca
aaattatctggtcctggacacagaggcttcgctgataaatctgcagcatgtggtcgactc
gtgtgtgacatcaaactctcagccaaggaactgatcagatctcgcagttacgatctcaca
gaactcactaatgtcatactgaaagcgaagagacaagagctggattacgatcaaatacac
aatatgtatctgtcatcacaacaattgcttcagctactagagctaacattaatggattct
acgtatatcctgcgtattctgtttgagctgaatgttcttcctctagggcttcagatcacc
aatatctgtggaaatgtcatgacaagaacattactcgggggaaggtcagaaagaaatgag
tatctgctgctgcatgcctttactgagaaaaacttcattgtcccagacaaagagtacaaa
aaaaccactgtgaaagagaacatggatgacttcgaagcagatgatggtgggaagggaggt
aaatctagtgggcgtcgtaaacctgcatatgctggaggtcttgtgcttgacccaaagaaa
ggtttctatgacaagtacatcttgctgctggatttcaacagtctgtatccctccattatt
caggagtttaacatctgtttcacgacagtcagccgaacagctgttcaacagggtggtcag
gatgacgaagaccagattatcgagctaccagacaaggacttagagcctggcatcttgcca
actgagatccgtaaactggtggagagcagacgacaagttaagcaactgatgaagggagac
atctccaacgaacagtacatgcagtatgacatcagacagaaggccctaaagctgacagcc
aatagtatgtacggctgtctaggattcagtcactcgaggttttttgctaaacctttagca
gcacttgtcacagcaaaagggagagagattttaatgaagacaaaagacttggtgcaaact
atgaatctggaggttatatatggtgacacagattcgattatgatcaacacgaactgcaat
gacattgatgctgtctacaaagtaggcaacaaggtgaaatcggaggttaacaagctgtac
aggttgttggagattgacattgatggagttttcaagtccatgctgttactgaagaaaaag
aagtatgctgccctcagtatttccaagggtccagatggaaagtacacagaacacaaggaa
ttgaagggactggacattgtccgcagggattggagtgacttggccaaagaggccggaaat
tatgtggtggaacagattttgtcgggagactcccgagaaaccattgtagaaaacatccat
accaaactgatggaagtcggggagaaagttagaaacgggaaagtcgcagtagaactgtac
cacattaccaagcaactgacaaagaatccggaagattaccccgataaaaagagtctacct
catgttcaggttgccctcagagtcaacagtaaggggggcaagaaaatgaaggcaggggac
actgtagcctacatcatctgtgaggatggatcatcactggctgcctcgcagagagcatac
catccagaggagctggcaaagagcgacacactcacagtcgacacaaaatactacctctcc
caacaagttcatccggtggtgtctaggttgtgcgatcctatcgagggcacagatgctgca
catttagccgagtgtttaggtttggacccgtcgggttacaagcatgctgttcattatgat
gaggaggaagaagccctgatgaatgggacggagatttcggatgaggagaaatatagggac
tgtgagcgattcaagtttgtgtgccctggcgccacgtgtagccgagaaattattgtggat
gcagtcttcatgggagctgaggagtttaccgagtgttccgtcagtatatgtcccaacaag
gaatgtcgaactgacatgaaagatcacgtcccatacatcagcaacagactacaaatggac
atcaggagacatattcagaaatattaccagggttggctaaagtgtgaagatgctgcctgt
ggaactgtgacaaggaaagttcctttgacctttcagcgaggtcacccagtttgtcatgcc
tgtcatagaggccttctgcatccactgtacactgacaccatgctgtacacacaactctgc
ttctatgaacacatttttgatgcagagagagctctcaagggcatgacagatggttctaaa
gaaaaatgtaagttgtaa
DBGET
integrated database retrieval system
