Ostrea edulis (European flat oyster): 125658548
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Entry
125658548 CDS
T09123
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125658548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125658548
03012 Translation factors [BR:
oed03012
]
125658548
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125658548
Translation factors [BR:
oed03012
]
Eukaryotic type
Release factors
125658548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
125658548
NCBI-ProteinID:
XP_048745786
LinkDB
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Position
9:complement(70111878..70123339)
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AA seq
443 aa
AA seq
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MASNGVDGESSADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRIAKMLADEF
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTDEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVQLFISNDKPNIAGLVLAGSADFKTEL
SQSDMFDLRLQAKIIKIVDVSYGGENGFNQAIELAADGLANVKFIQEKKLIGRYFDEISQ
DTGKYCFGVDDTLKALEMGAVDILIVWENLDVTRYVLKNHATDVENILYLRPEQEKDKTY
FVDKDTGVELELSEQMPLLEWFANNYKNFGATLEIITDKSQEGAQFVRGFGGIGGILRYQ
IDFQVLSGQVFDDLEDDFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaatggagttgatggcgagagcagtgcagacagaaatgtagaaatatggaag
atcaagaaactcatcaagagtttagaagctgcgagaggaaatggtacgagtatgatatcg
ttaattattccaccaaaagatcagatatccagaatcgccaagatgttggcggatgagttt
ggtacagcatcaaatatcaaaagtcgcgtgaaccgactgtcagttctgggagccattact
tcagtacagcagaggttaaaactatataacaaagttccaccgaatggattagtgatatac
tgtggtactattgtgacagatgaaggcaaggagaagaaagtgaacatagatttcgaacct
ttccgacccattaacacgtccctgtatttatgtgataataaattccacacggaggctctg
acagcgctgttagcagatgacaataaatttggatttattgtgatggatggtaatggggcg
ttgttcggtacactgtcgggaaacactagagaagtcctacacaagttcactgtcgattta
cccaaaaagcacggaagaggaggtcagtcagccctgcgttttgcccgtttacgtatggag
aaaagacacaactatgttaggaaagttgctgaagttgcagtacaactattcatttccaac
gacaaaccgaacattgctgggcttgtgttggcagggtcagctgacttcaaaacagaactc
agtcaatcagacatgtttgatctgagattacaagccaaaattataaagattgttgatgtg
tcttatggaggggaaaatggtttcaatcaggcaattgagctggctgctgatggacttgcc
aatgtcaaattcatccaggaaaagaaactcataggtcgttattttgatgaaatctcacaa
gatacagggaaatactgctttggtgtggacgatacgttaaaagcattagaaatgggagcc
gtggacattctcattgtgtgggaaaatctggacgtcacaagatatgtcctgaagaaccac
gccacagacgttgagaatattctgtacctccgaccagagcaggagaaagacaagacctac
tttgttgataaagatacgggggtggagttggagttgtcagagcagatgcctttattagag
tggtttgcaaataactacaaaaattttggtgccaccctagaaattatcacagataagtca
caagaaggagcgcagtttgttcgcggcttcggtggaataggaggaatacttcgatatcag
atagactttcaagtgttatcagggcaagtgttcgacgatttggaggatgattttgattta
gatgactattga
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