KEGG   Ostrea edulis (European flat oyster): 125658700
Entry
125658700         CDS       T09123                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
oed  Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:oed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oed03036]
    125658700
   03400 DNA repair and recombination proteins [BR:oed03400]
    125658700
Chromosome and associated proteins [BR:oed03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    125658700
DNA repair and recombination proteins [BR:oed03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125658700
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_ECM29 IFRD
Other DBs
NCBI-GeneID: 125658700
NCBI-ProteinID: XP_056005007
LinkDB
Position
9:36478691..36525634
AA seq 1000 aa
MAAPMWKGEVDRYIKNSEGSSLEMLCNGLQEKSISLLQFIENIGEYLTNEDHQVRGRVIK
LMSDVLVNIPSSLLSSVEVKLLVTYLCERLQDHHSIQPLVLRALLTLIVGSGSGLPEGCA
EAVCKEIFKEVQVQSLCQTDRCTIYNIYTSLLKEKLSELQTMGTDFVFGFIQSMDTEKDP
RNLLLAFHCARTIILNFSLGPFVEEMFEVISCYFPIDFTPPPNEDHGITRQDLIHGLRGC
LSSHPEFGPQCIPLLLDKLQSDIQSAILDSLHTLAAGVLVFELRCVAEFQGSLYRCIKQE
IFSPKSPEIESAANIALTAISSALSPQVGLSTDNSEVDVFIKEITQDCKRHFSDEDLRLF
TPSCQLLLAVALGSDHACCVILQQMVPLLENMYNKFTGVNQRKQIIEMLSKFLCSSREFI
GGRAPKLVSGMMSSSLRILMSSTSQSNVALTSMAVQGLGELVSLPDVLTAEDVKSVCGCV
LDQVLNSRDNKVRSSCVEPCKEMMKVYPELSAEIIPRLMDRINSGEGEDIFDFVAIFAAD
SRVISNTTQQLLNKLQQESLAMSESASQTCLSLTSCLIDISMYVRGNSDCVSTLCAETVP
GVYQLVVRNALSDNYSEVLSSPKVLQSLSTFIRNTVVMLDLTMYTTLYTYVTNLYCEVDK
DDLQKQFMPLEWSSPWQQTSLVTLLTPVLCSCPQKYMLPDVQRYRDKLCDLSLRSNHDYT
KSEAAKCLAGLLNKATDDEVLTVYLERRYESYEQNLISGNKESSCLQQSIWVTKALVMRG
HREAYKFVKILLTLLGCESLGNQAAEGFGIILSMYEDVLNPVMHANIRFLYKQRFFTENS
SHLIECFQQASSETKRNYLVALSHCIRSLPKSVLVRELPPLFPMLVQSLLCENTQLQQST
METLCTMITDTPDIIVKHVDTVIPQLLKLTTYTPAMRVRCGALQCLCDLVNLPSPVILPY
KMRVVKVLEGVLDDKKRLVRLEAVRARNEWFLLGEPGGRP
NT seq 3003 nt   +upstreamnt  +downstreamnt
atggctgcgcccatgtggaagggcgaagttgatagatacataaaaaactccgagggttct
tcacttgaaatgttatgtaacggattgcaagaaaagtcaatttctctgcttcagtttatt
gaaaatattggagagtatttgaccaatgaggatcaccaggtgagggggcgtgtcatcaag
ctcatgtctgatgttcttgtcaacattccaagtagtcttctgtcttcagtggaagtgaag
ctgttggtgacatacttgtgtgagagacttcaagaccatcactccatacagcccctagtt
ctcagggcactgctgacactgattgttgggagtggatccggactacctgaggggtgtgcg
gaggcagtgtgtaaagagatttttaaggaggtacaggttcaatccctgtgtcagacagac
agatgtaccatctacaacatttacacatcactcctcaaagaaaaactctcagagttgcag
acgatggggactgactttgtatttggctttatccagtccatggatactgaaaaggaccct
cgaaatcttctgttggccttccactgcgcaagaactatcatcctgaatttctctctaggt
ccctttgtagaggagatgtttgaagtcatttcctgctactttccaattgattttactccg
ccacccaatgaggatcacggcatcaccagacaggacctgattcacggattacggggctgc
ctgtcctcccatccggagtttggaccccagtgtatcccgctattactggacaaactacag
tccgacatacagagtgctattctagactctcttcatactttggctgctggtgtcctggta
tttgaattgagatgtgtggcagagtttcaggggtcactctacaggtgtatcaaacaagag
atattcagtcccaaatcaccggagatagagtctgccgctaacattgccttgacagcaata
tcctctgcactttctcctcaggttggtctatctacagacaattcagaggtggatgttttc
ataaaggaaatcacgcaagattgtaagcgccacttttcagatgaggatctgaggctattc
acaccctcttgtcagctgttgcttgcagtggcactgggctctgatcacgcatgctgtgtt
attttacaacagatggtgcccttactggagaatatgtacaacaaatttacaggggtaaac
caaagaaaacaaatcattgaaatgctttccaagtttctatgtagttccagagaattcatt
ggaggaagggctcccaagcttgtgtcaggaatgatgtcatcttctctaaggattttgatg
tcttcaacctctcagtccaatgtggccttgacctctatggctgttcaaggactaggtgaa
cttgtgtccttgcccgatgttctgacagcagaggatgtgaaatcagtgtgtggttgtgta
ctggaccaggttttaaacagcagggataacaaagttaggagttcttgtgtggaaccctgt
aaagagatgatgaaggtttatccagaattatcagcagaaattataccgagactgatggac
agaattaactccggggaaggagaggacatttttgattttgttgccatatttgcagcagac
agcagagttatttcaaataccacccaacagttgctgaataagctacaacaagaatctctt
gccatgtctgagtcagcgtcacagacctgcttatcactgacgtcctgtctcattgacatt
tctatgtatgtcagaggaaattcggactgtgtgtccacgctgtgcgctgagacggtcccc
ggggtctaccaactggttgtgcgtaatgctttgtctgacaactacagtgaagtcttgtct
agtcccaaagtgctacagtcattgtccacatttataagaaatactgtggttatgctagac
ttaacgatgtacaccacattatacacctatgtaacaaacctgtattgtgaagttgataag
gatgatctacaaaaacagttcatgccgcttgagtggtcgtcgccgtggcagcagacctca
ctcgtgacacttttgacacctgtgctgtgttcctgtccccagaagtatatgttacctgat
gtccagagatacagagacaaactctgtgacttgtcacttaggagtaaccatgactacaca
aagtctgaagcagcaaaatgtttggccggccttctgaacaaagccactgacgatgaagtt
ctgaccgtatacttagaaaggagatatgaatcttatgaacagaatctgatctcgggcaac
aaagaaagctcctgtctgcagcagtccatctgggtcacaaaggctcttgtcatgagaggg
cacagggaagcctacaagtttgtcaaaatactgctgacattgttgggatgtgagtctcta
ggcaaccaggctgcagagggatttggaatcattttatcaatgtatgaagacgttctgaat
ccagtcatgcatgccaatattcgcttcctgtacaaacagagattcttcacagaaaactcc
agccacctcatcgaatgtttccaacaggcttcatcagagacaaagaggaattacctggtg
gcattgtcacactgtatccgatctcttcccaagtcagttctcgtccgagaacttccaccg
ttgtttccaatgcttgtacaatctctgctgtgtgaaaacactcaactacagcaatcaacc
atggaaacactgtgtacaatgatcacggataccccagacatcattgttaaacatgtggat
acagtgattcctcagcttctgaaattaaccacatacacaccagccatgagggtcagatgt
ggggcattgcagtgtttgtgtgacctggtgaaccttccctctcctgtaattttaccgtac
aaaatgcgagtggtgaaggttctggagggagtgctggatgataaaaagaggctcgtaaga
ctagaggctgtcagagctaggaatgaatggtttttgctgggagaaccaggaggaaggcct
tga

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