Ostrea edulis (European flat oyster): 125658822
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Entry
125658822 CDS
T09123
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125658822
Membrane trafficking [BR:
oed04131
]
Protein recycling
Others
Others
125658822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
K319L-like_PKD
DUF1616
ChitinaseA_N
DUF5534
PKD_6
Calycin_like
DUF1180
SKG6
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
125658822
NCBI-ProteinID:
XP_048746197
LinkDB
All DBs
Position
9:complement(48838041..48867956)
Genome browser
AA seq
1146 aa
AA seq
DB search
MEDVNIGAIAVWVHVLLILLIYPTQGKFHQWGNGDESVVKLDFKNVDPQNDNFLRFKRET
SSGFNVTTDSNMQHRVTSNKFVIPDTNHTQAVVHWSGKGSDVLFVLTREQQAFRVVDSTF
WRSSDYGKTFQKIAFDSDAVLDMIYKSTTDSGRKKMIVTDCTNKRLYLSSDEGLTWSRMD
VPFPPDTLVIHPTEPGWMLGFSLFDMQLFVSSNYGRNWTLLHEHVMQNFFWAVEAEDENK
FTVHMEITDYLAFSEYKACIAPACTDITVDKSLGTIDPFSLLVRNEYIFIKKTEPDQHNP
ELYVSYKRGPFRKTYFPLNVHPRDFLIVDANQNQVFVAADHEENLVTLYLSEPTGQFFVP
TLENIVSDQESGWFQLEIDLYEVKGIPGTYISNQYFIPDPKGDQVSERTFITFDKGGNWR
LLEPPAELKPGCKNPQRCSLNLHQTYSKNKLNIPGIVSKPEAPGLILAHGRVGESLYNGV
QARVFISRDGGLSWKQAPFMGYYHLNILDQGGVITAILQDDRTNSVYYSIDEGSTWYSHE
FTDKPMIVDGVLNEPGINTLMVSVYGRLSEKGNRQMVQLNFTDVFTRKCSDVDYQIWTVF
EKGCILGRKMQYHRRSAEAKCYNGRDYKRPTISSTCLCSNEDYECDYGYELTDTVNKICT
RADWFDENLIKLNCKGGQAYNKSQGYRKVAADRCVGGVENSDKYRPIVAMCPVFPPTGLR
LSVTKSVFPTGERIAFSLSQAKGSEYVTSYTWSFGDGQNVTVTGLTNSAQNTHTYMKAGK
YNVSVTASNSGGQASCYITISIEDMLKAVYLELPWGSQVGQRTLLRASLFGDHLNDFGLV
HYVWKFGDKYKEEPYLTWTPATSHNYNRTGEYSVSVEAVNAVGSVKREMTINVYEEVATV
QLKLTGNFQSVNKGTFLSRSATSDLLAIELSKILHLSPKRLIVTIPSNTKSNIVDVTILP
PETRGLSIKQVLSEIQDKVQGQEVVFTLLTDAENTVAAISVKVIHSQDIPSPNSPVPWNV
VTPPSSSHNEDTPTSVNTNISVIVGVSVTIAVFIIVGISIAIYRRRKVKKDHRYSLIMNR
SQLPKTDDEEDFMDDDDFIEGIDEYLDGDDNTDGSSNIVINTGRHPTLVMMTGGRHSNSP
DNTSIC
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtaaacataggagctattgcagtatgggtgcatgttttgttaattttattg
atatacccaactcaaggaaaattccaccagtggggaaacggtgatgaaagtgttgtaaaa
ttagactttaaaaatgtcgatcctcaaaatgacaattttcttaggtttaaacgcgaaaca
agcagcggttttaacgttacgacggacagcaacatgcaacatcgtgtgaccagcaacaag
tttgtaatccctgatacaaaccacactcaggccgtggtccactggtctggaaagggaagc
gatgtgctgtttgttttgacccgagaacagcaggcctttcgtgttgtggacagcacattc
tggaggtcatcagattatgggaaaacatttcagaagattgcctttgactcagatgctgtt
cttgatatgatttacaaatctaccactgactctggcaggaagaagatgattgtgacagac
tgtaccaacaaacgcctgtacctctcctccgatgaggggctgacctggagccggatggat
gtgcccttcccccctgacacccttgtgatccaccccacagaacctggctggatgctggga
ttctcgctgtttgacatgcagttatttgtgagcagtaactacggacggaattggacactt
ctacatgaacatgtgatgcagaacttcttctgggctgttgaggctgaagatgagaataaa
tttaccgtccacatggagataactgattatctggctttttcagaatacaaggcgtgcatt
gctccagcctgtactgacatcactgtggacaaaagtttgggtactattgatccattttca
ttgttggtccgaaatgaatatatatttataaagaaaactgaacccgatcaacacaaccca
gaattgtatgtctcatacaagagaggcccatttaggaaaacctatttccctctgaatgtc
catccaagggatttcctgatagttgatgctaaccagaatcaggtttttgtggcagctgac
catgaggagaatctagtcactctttatttatctgaaccaactggtcagttttttgtcccc
accttggagaacattgttagtgatcaagagagtgggtggtttcaactggaaattgatttg
tacgaggtgaagggaattccagggacatacatctcaaaccagtattttataccagatccc
aagggagatcaggtgtctgagaggacctttatcacgtttgacaagggaggtaactggaga
ctacttgaacctcctgcagaactgaagccagggtgtaaaaatcctcagaggtgtagtctg
aatcttcaccagacgtacagtaaaaataaattaaacatcccgggcattgtctccaagcct
gaggccccagggctgattctggctcatggacgggttggtgaaagtttgtacaatggggta
caggccagggtgttcatcagtagggatggaggcctatcatggaaacaggcaccttttatg
gggtattaccaccttaatatactggatcaaggcggggtcatcacagccatcctccaggac
gataggaccaattctgtatattactcaatcgacgagggatcgacatggtattcccatgaa
ttcacagataaaccaatgattgtcgatggagttctgaacgaaccaggaatcaacacgctc
atggtcagtgtgtatggtagactaagtgagaagggaaacaggcagatggtgcagctgaac
ttcactgatgtgttcaccaggaagtgctctgatgtcgattatcaaatctggactgtattt
gaaaagggttgcattttgggtaggaaaatgcagtatcaccgcaggagtgcagaggccaag
tgttacaatggtcgagattacaagaggccaaccatctcatcaacatgcctgtgtagtaat
gaagattatgaatgtgactatggttatgaactgactgatacagtaaacaaaatctgtaca
agagcagactggtttgatgaaaatctgatcaaactcaactgtaaaggtggacaagcttac
aacaaaagtcaggggtataggaaggtggcagctgatcgctgtgtaggaggggtagagaac
tccgataaatatcgccccattgtggcaatgtgccctgtcttcccccctaccggactacgg
cttagtgtgactaagtctgtgttccccaccggagaaagaatcgcattctctctgtcacag
gcaaagggatcagaatatgtgaccagttacacctggagttttggagatggtcagaatgtt
acagtgaccggtttgactaattctgctcagaacacgcacacctatatgaaggctggaaaa
tacaatgtgtcagtgactgcctctaacagtggaggccaggcttcctgttacatcaccatc
tccatagaagacatgttgaaggcagtgtacttagagcttccgtggggatcacaggtagga
cagcggactctactgagggcttctctgtttggggaccacctcaacgactttggtctggtc
cactatgtgtggaagtttggtgacaagtataaggaggaaccctatttgacctggacacct
gccacttcacacaattacaacaggacaggggagtactcggtcagtgtagaggcggtcaat
gctgtagggtcagtgaagagggagatgaccattaatgtctatgaggaggtggccacggta
caactcaagttaacgggaaactttcagagtgtgaacaagggaacatttctgagtagatcc
gccacgtcggatctccttgccatagaactgtccaagattttgcatctttcaccaaagaga
ctgattgtaacaatcccctcaaatacaaagtctaatattgttgatgttacaattctgccc
ccagaaacaaggggcttgtccattaaacaggtgctttcagaaattcaggacaaagttcaa
ggtcaagaagtggtctttacattgttgacagatgcagaaaatacagttgcagccattagt
gtcaaggtcatacattctcaagatattccatcaccaaacagtccagttccttggaatgtg
gtcacgcctccatcctcatctcataatgaggacacgcccacctcagtaaacacaaatata
tctgtaatagtgggcgtgtctgttactatcgcagtattcatcattgtaggaatcagtata
gcaatatacaggagaagaaaagtgaaaaaagatcaccgttattcgctgataatgaatcgg
tcacaattaccaaagactgatgatgaggaagactttatggatgatgatgattttattgaa
gggattgatgaatatttagacggtgatgataatacagatggcagctcaaatattgtaata
aacacaggtcgacatcctacattggttatgatgacaggtggtcgtcatagtaacagtcct
gataacacgtctatatgctag
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