Ostrea edulis (European flat oyster): 125658904
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Entry
125658904 CDS
T09123
Name
(RefSeq) actin-interacting protein 1-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oed04990
]
125658904
Domain-containing proteins not elsewhere classified [BR:
oed04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125658904
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
CFAP251_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_like
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_1st
PROPPIN
Tricorn_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125658904
NCBI-ProteinID:
XP_048746306
LinkDB
All DBs
Position
9:complement(15046109..15065613)
Genome browser
AA seq
603 aa
AA seq
DB search
MGSYEQIKCFASLPRTTRGKALVLNGDPKGKNMLYTNGNSVIIREIENPAMSDIYTEHST
QTTCAAYSPSGFYIASGDMAGKVRVWDTINKEHILKNEYQPFAGEIKDIAWSGDSQRLAA
GGHGNQKYSHVFTADSGNSLGELIGHSADVNNISFRPERPFRLVSASEDNSLCFYEGPPF
KFKVALKDHTNFVNVVRYSPKGEVFISGSADKKCYIYDGKTAEKIGELGSPTAHNGGVYA
LSFNSDGSQVLTVSGDKTARIFKVPSGELVQTFEMGKAVEDMQVGCLWQGDNILTVSLSG
FINYLDLNNPSTPRRILKGHNKPITALALSDGTIYSAAGAQDSHVNHWDAETGENDRFTG
TSHKNQIQDMVIANGELVTVGMDDIIMFSNVGSKQFGVSQGLESMPKAVSASSKFVVVAC
IKHVAVFQNKTKCFSQAVPYEPCSVAIHPSQPLVAICGAADKKIHLYSINEGNGSLQETQ
AIDNTGMACDVMFSPNGEYLATAGADRYVRCFKLPDYQLVFSDPTHTARVNCIDWSPDSS
LFATGSLDQSIGVWKPTGSHSDRSLVIKAAHKLSHPTRVRWLNNNTIVSAGHDSNIKQWR
VQF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggggagctatgaacaaattaagtgcttcgcaagtttacccaggacaacaagaggtaaa
gcactggtcctcaatggagaccccaagggaaaaaacatgctgtacacaaatgggaacagt
gtaataattcgggagatagagaatccagccatgtctgatatctacactgagcattcaact
cagacaacatgtgctgcctactcgcccagtggattctacatagcatcaggagatatggcg
ggtaaagttcgagtttgggatactattaataaggagcacattttgaaaaatgaataccag
ccatttgcaggagagataaaggatatagcttggtcaggtgatagtcaaaggcttgctgca
ggtggacatggaaaccaaaagtattctcatgtcttcaccgctgacagtgggaattcctta
ggtgaattgattggtcacagtgctgatgtcaataacattagtttccgcccagaacgacct
ttcagattggtcagcgctagcgaagacaacagtttgtgcttttatgaaggtccaccattt
aaattcaaagtcgcattaaaggaccacaccaactttgtaaatgttgtccgttattcccca
aaaggagaagtattcatcagtggtagtgctgacaaaaagtgttacatatatgatggaaaa
actgctgaaaaaatcggagaattggggtcacctacagcacacaatggtggagtttatgct
ctaagttttaacagtgatggctcgcaagttctgacggtgtcaggagacaaaactgccagg
attttcaaagttccaagtggagaattagttcagacatttgagatgggtaaagcagtggaa
gacatgcaggtgggatgtctgtggcagggagataatatcctcactgtgtccctgtcaggc
ttcattaactacctagacctcaacaatccctcaactccacgacgcatacttaagggtcac
aacaaaccaatcacagccttagctctgtctgacgggacaatctactcagccgcaggggcc
caggattctcatgtcaatcactgggatgctgaaacgggagagaatgatcggttcacggga
accagccacaagaaccagattcaggacatggttatcgccaatggagaattagtaacagtt
ggtatggatgatatcataatgttctctaatgtcggcagtaagcagtttggagtttctcaa
ggtttggagtctatgccaaaggcagtgtcagcaagttctaaatttgtggtggtggcatgt
atcaaacatgttgcagttttccagaataagacaaaatgtttctctcaggcggtgccatac
gagccatgcagcgtggctatccatcccagtcagccattggtggcaatctgtggtgctgcg
gataaaaagatccacttgtactctatcaatgaaggcaatggatccctccaggagacacag
gccattgacaacacagggatggcttgtgatgtaatgttctcccccaatggggagtattta
gcaacagccggggctgatagatatgtcagatgcttcaaactcccggactatcagttggtg
tttagtgatccgacccatactgcgagagtgaactgtattgactggtcccccgattcatca
ttgtttgcaactggttccctcgatcaaagcattggagtgtggaaacccacaggttcccat
agtgaccgcagtctggtgattaaagctgcacacaagctgagtcatccgacaagggttcgc
tggttgaacaataacaccattgtatcagcaggacatgacagtaatattaaacaatggcgg
gtgcagttttga
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integrated database retrieval system