Ostrea edulis (European flat oyster): 125658912
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Entry
125658912 CDS
T09123
Name
(RefSeq) cullin-4A-like isoform X1
KO
K10609
cullin 4
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03420
Nucleotide excision repair
oed04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125658912
09124 Replication and repair
03420 Nucleotide excision repair
125658912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125658912
03400 DNA repair and recombination proteins [BR:
oed03400
]
125658912
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
125658912
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
125658912
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125658912
TCR (transcription coupled repair) factors
Cul4-CSA complex
125658912
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125658912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Nnf1
Motif
Other DBs
NCBI-GeneID:
125658912
NCBI-ProteinID:
XP_056005667
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All DBs
Position
9:57759689..57835262
Genome browser
AA seq
833 aa
AA seq
DB search
MPLSSTNKPNLQDEQKFNDEDNRKKRKLSEGISPPNHKRARENIEDSQMTDSQRRANFSA
ISSPSNGLNKHVSPLANNKPGATKKLVIKNFKEKPKLPENFQQHTWEKLKESVEAIQKST
SIRWSLEELYQAVENMCSHKMSALLYDQLKEVCDKHIRSNVEQFKAENVGYEQFLKNVDG
CWQAHCRQMIMIRSIFLFLDRTYVLQTSSVMSIWDMGLELFRTHIMFHPVVQKRTVDGIL
QLIERERAGEAVDRQLIKSLLRMLSDLQMYVDAFEQSFLEATESLYAAEGQQLMQERDVP
EYLAYADKRIHEEMERLLHYLDMSTKKPLVSCVEKQLLEKHLTQILQKGMDQLLTENRIK
DLTLMYQLFSRVKDGLKEMCTAFALYIKVTGKTIVMNPDNDAEKDKDMVQNLLDFKDKMD
NIIEVCFSKNEKFINALKESFETFINQRQNKPAELIAKYVDSKLKAGNKEATEEELERLM
DKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGAAFTSKLEG
MFKDMECSKDFNLSFKQHMQHIDSPGGIEMTVNILTMGYWPTYTPMEVHLPADMVKLQEI
FKSFFYSKHSGKKLQWQSTLGHCVLKAKFAGGEKKELQVSLFQTLCLLLFNDGDEFSFEE
IKTATAVEEGELKRTLQSLACGKARVLIKNPKGKDVENGDKFLFNGGFKHKLCRIKINQI
QLKETPEENTTTTERVFQDRQYQVDAAIVRIMKTRKTLTHNLLISELYNQLKFPVKVSHI
QSNMLITNTLKTNSRLLRNYIYFPMKGILLDITKFGLAITLFYCIFSSKYFCF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctcaagcactaataagcccaatctgcaagacgagcagaagtttaacgacgag
gacaaccggaagaagcgaaagttgagcgagggcatatcgcctccgaatcacaaaagggct
cgtgaaaacattgaggattcgcagatgactgactcacaaagaagagccaatttttctgca
atatcaagtccaagcaatggacttaataaacatgtgtcgccattggcaaataacaagcca
ggtgcgacgaagaaacttgtgatcaagaacttcaaagaaaaacctaagcttccagagaat
ttccagcagcacacatgggaaaagttgaaggaatctgttgaggcaattcagaagagcaca
tccattcgctggagccttgaggagctgtaccaggctgttgaaaacatgtgctcacacaaa
atgtctgccctgctgtatgatcagctaaaggaagtctgtgataaacacatacgatctaat
gtggaacaatttaaagctgaaaatgttggatatgagcagttcctgaaaaatgtagatggc
tgttggcaagcccattgtcgtcaaatgattatgatacggagcattttcctgtttttagac
cgaacatatgtattacagacatcttctgtgatgtccatttgggacatgggtttggagctg
tttcgcacacatattatgtttcacccagtagtacagaagaggacggtggatggcattcta
cagctaatagaaagggagagagctggggaagctgtagatcgacagctgattaaaagtctt
ctcagaatgttgtcggacctgcagatgtatgtggatgcatttgagcaatcattcctggaa
gccacagaaagtctgtatgctgcagaggggcagcagctaatgcaggagagagatgttccg
gaatatctggcttatgctgacaaaagaatccatgaagagatggagagattgttgcattac
ctggacatgtccactaaaaaaccactagttagctgtgtagaaaagcagttactggaaaag
catttaacacaaatactgcaaaaaggtatggaccagctgttgacagaaaacagaatcaag
gatttgaccttgatgtaccagttgttttcaagggtaaaagatggtctgaaggaaatgtgt
actgcatttgctttgtatatcaaggtaacaggaaagaccattgtgatgaacccagacaat
gatgcagagaaggataaggatatggtgcagaacttgcttgatttcaaggacaaaatggac
aatatcattgaagtgtgcttttctaaaaatgagaagtttatcaatgctctgaaggagagt
tttgaaacgttcatcaatcaacgacagaataagccagcggaacttatagccaaatatgta
gactcaaaactgaaagctggaaataaggaggccactgaagaagaattagagagattaatg
gataaaatcatggtgctatttagattcatacatggtaaagatgtatttgaagcattctac
aaaaaagatctggccaagcgcctcctggtgggaaaaagtgcatcagtggatgctgagaag
tctatgttatccaaactcaaacaagaatgtggagcagcattcacaagcaagctggaagga
atgttcaaagatatggaatgttccaaagattttaatttgtctttcaaacagcacatgcag
cacatagatagcccgggtggtattgagatgacggtcaacattctaacaatgggatactgg
cctacctacactccgatggaggtccatttacctgcagatatggtgaagctgcaggagatc
tttaagtccttcttctacagtaaacacagtggtaagaagttacaatggcagtctaccctg
gggcactgtgtactcaaagccaagtttgcagggggagagaaaaaggaacttcaagtatcc
ttgttccaaaccctctgtctgttgttgttcaatgatggtgatgagttttcttttgaggaa
atcaagacagccactgctgttgaggaaggcgaattgaagagaactttgcaatcccttgct
tgtggcaaagctagggtcctcattaaaaacccaaagggcaaagatgttgagaatggtgac
aaattcttgtttaatggtggctttaagcataagctttgccgcatcaagataaaccaaata
cagttgaaagagacaccagaggagaataccacaactacagagagagtatttcaggaccgg
cagtaccaggttgatgcagccatagtcagaattatgaaaacaaggaagacactgactcat
aaccttcttatctcagaactgtacaaccaactcaaatttcctgtcaaagtaagccatata
cagtcaaacatgcttataacaaatacacttaaaacaaattcacgtttattgcgaaattat
atttatttccctatgaaaggaattttattggatataacaaagtttggtttggctataacc
ttgttttactgtatattttcttctaaatatttttgtttttag
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integrated database retrieval system
