Ostrea edulis (European flat oyster): 125659062
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Entry
125659062 CDS
T09123
Name
(RefSeq) vesicular integral-membrane protein VIP36-like
KO
K10082
lectin, mannose-binding 2
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125659062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125659062
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oed04091
]
125659062
Membrane trafficking [BR:
oed04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
125659062
Lectins [BR:
oed04091
]
L-type lectins
125659062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
DUF5491
UL42
Motif
Other DBs
NCBI-GeneID:
125659062
NCBI-ProteinID:
XP_048746560
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Position
9:complement(40637799..40648002)
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AA seq
331 aa
AA seq
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MNVCRWQISWIVGFLLFLSEVIGEFDRTDYLKREHTLVKPYTGSGFSVPLWDFVGTTMVT
NSYVRLTPDYQSRQGGIWNTMPLTVKNWELHVHFKVHGSGKNLFGDGIGIWYAKDRNQLG
PVFGNKDFFVGLGIFLDTYSNHNGPHNHEHPYISAMVNNGTLHYDHDRDGTHTEIAGCEA
KFRSKDYDTYVAIRYQDEVLKVSTDIDNENKWKECFVVGGVKLPVGYYIGATATTGELAD
NHDIISMKLYELESLKKDDDSSSYQGLPSAQFFTPPRDHIEDPKGGFMSGSMSGWKVFII
IVMAIIGLIVCGVVGYVVFNKDGGYNSKRFY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgtgcaggtggcagatttcgtggattgttggatttttgttatttttgtcagaa
gttatcggggaatttgatagaacagattatttaaaaagagagcacacacttgtgaagcca
tatacaggatcaggattttctgtgccactatgggattttgtagggacgactatggtaaca
aatagctatgtacgattaacaccagattaccaaagcagacaaggagggatatggaatact
atgccattaacggtaaaaaattgggaattacatgtgcattttaaagtgcatggtagtgga
aagaacctttttggagacggtataggtatttggtatgcgaaagacagaaatcaattaggt
ccagtctttggaaacaaggatttttttgttggattgggaatattcctggatacatacagc
aaccacaatggacctcacaatcatgaacacccatacatatctgctatggtgaacaatggt
actctgcactatgatcatgaccgtgatggtacacacacagaaattgcaggctgtgaagcc
aaatttcgcagcaaagactacgacacttacgtagccatcagataccaagatgaagtactg
aaggtttcaacagatatagacaatgagaacaagtggaaggagtgttttgttgttggtgga
gtaaaactacctgtagggtattacataggtgctactgctacgactggtgaattagcagat
aaccatgatatcatttctatgaaattatatgaattggaatctttaaaaaaggatgatgat
tcctccagttaccaaggcttgccatcagcccagttctttacaccccccagagatcatata
gaggatccaaaaggaggcttcatgtcaggcagtatgtctggatggaaagtgtttatcatc
atcgtcatggcaataattggactaatagtctgtggagtagtgggctacgtggtgtttaat
aaagatggcggttacaacagcaaacgattctactaa
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