Ostrea edulis (European flat oyster): 125659097
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Entry
125659097 CDS
T09123
Name
(RefSeq) DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125659097
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125659097
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Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
EIF3I
ANAPC4_WD40
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
125659097
NCBI-ProteinID:
XP_048746602
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All DBs
Position
9:complement(61586111..61603462)
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AA seq
649 aa
AA seq
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MTCKDAKFTPLFWLTKRELGHKVSSVESRSFRGGIYSSLKAVHKWDPQKTVDSTHHGGIF
NFDFSPDGSLLAAACEGQSILLFDPFNGRLIGEKSKAHTDCVNIVKFLDCRLFATCSDDS
TVALWDVRFLKHKLHELKGHTNWVKNIEYDRNTGLLVTSGFDGNIFTWDINRYSETETKG
TKVFTYKLLMRSKLSPDSSKLVVSTQNGYIIVIHDLDLLTLADDLKNFPAYGSPASFPFQ
RNQRRNRVELIREWPSGDNASDIASLQIHPQGWCVMSRNVSRDKKSEWTCIHDLQEPIKR
RDSQEFSVMPHTSCGQSSSTYTPASASTAPTTLVTTAPRTSTSPGASIRTQTTPSIIINP
TFSEDSAMGTVSAPSIVINPPTFSVEGRQVGDNSHRTVRNGPSALVINSNPSSGAEDFQS
SVTIHITTQAGTSTSQLGRRNLLTASDLSPSSSVDSNPHLEWALNHPSDREIESLLHDEL
SSESSADDSDSEFMAPEVRRGLDSSSDNPQYQDLVALIVRYDVNRGIIDVNHRVRFGSAY
ENPTSRTTDRLLYYTEEPNVARGFIKELCFSSDGRLICSPFGFGVRLLGFDPVCSELCDV
VPSQPIRLYEVANCLSHSNIVVTCKFSPRHCMFVSGCLSGKVMFHQPVL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtaaagatgccaaatttactcctctattctggttgacgaagagagaactggga
cacaaggtgtccagcgtagaatcgagaagtttccgcggaggcatatattcttcacttaaa
gctgttcacaagtgggatccacagaaaacagtagattctacgcatcacggggggattttt
aacttcgatttttcccccgatgggtcattgttagctgcggcttgtgagggtcaaagcatc
ctgctgtttgatccattcaatggacgcctgattggagaaaagagtaaagcacacacagac
tgtgtaaacattgtcaaatttctcgactgcagactctttgccacatgttccgatgattca
actgttgcactctgggatgtaagatttctgaaacataaactacatgaacttaaaggtcac
acaaactgggtcaagaacattgagtatgaccgcaacacaggcctcctggttacctctgga
tttgatggcaacatttttacctgggacatcaacaggtattccgagacagaaactaaaggg
acgaaggtcttcacatacaagctgttgatgcgttccaagctttctccagactcctccaaa
cttgttgtttcaacgcagaatggatacataattgttatccatgaccttgacctcctgacc
ttggcagatgaccttaaaaatttcccagcctatgggtcaccagcatcttttccattccaa
agaaatcagaggcgaaacagagtggagttgattcgagaatggccatcaggagataatgct
agtgatattgcctcattacagattcatccacaaggttggtgtgtcatgtccagaaatgtt
agtcgagacaagaaatcagagtggacctgtatacacgaccttcaggagccaatcaagaga
cgcgactcccaggaattttctgtgatgcctcatacttcctgtggtcagtcttcatctaca
tacaccccggcatccgcttccacagcgccaaccacgctggtcaccaccgcccctcgcacc
tctacctctccaggtgcgtccattagaacgcagacaacgccctctatcatcatcaacccc
accttctcggaagacagtgctatgggtacagtcagcgccccctccattgtcatcaatcca
ccgacctttagcgtggaaggtcgtcaagtgggagacaactcccatagaaccgtaagaaat
ggaccgtctgctttagttataaattccaacccttctagtggagcagaagatttccagtct
tcagtgacaattcacattacaactcaagcaggaacctccactagtcagctcgggaggaga
aacctcttaaccgcctcagacttgtcgccatcaagttcagtcgactccaatcctcatctg
gagtgggcgctgaatcaccccagtgatagagaaatcgagtcattgcttcacgacgaattg
agttctgaatcgagtgctgatgatagcgacagcgagtttatggctccagaagttcgaagg
ggcctggacagttcgtctgacaatcctcaatatcaggatctagtggctctgattgttcgg
tatgacgtgaataggggcattattgacgtcaaccacagggtacgatttgggagtgcttac
gaaaacccgacatctcggacgacggacagactcttgtattacactgaagaaccgaatgtg
gcccgaggattcattaaggagctgtgctttagttcggacggacgccttatttgctctccg
ttcgggtttggtgttcgattgcttggatttgacccagtgtgtagtgaactttgtgatgtg
gtgccaagtcagccgatcaggttgtatgaagttgctaactgcctgtcacacagtaatatt
gtggtcacgtgtaagttctcaccccgacattgtatgtttgtgtcgggctgtctgagcgga
aaagtcatgtttcatcaacctgtgctctga
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