Ostrea edulis (European flat oyster): 125659115
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Entry
125659115 CDS
T09123
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oed01002
]
125659115
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125659115
Enzymes [BR:
oed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125659115
Peptidases and inhibitors [BR:
oed01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125659115
Ubiquitin system [BR:
oed04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125659115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
125659115
NCBI-ProteinID:
XP_048746622
LinkDB
All DBs
Position
9:50447782..50499833
Genome browser
AA seq
2555 aa
AA seq
DB search
MTIVMKGGQSGGDAPQDTPSHQGTSQVSPSASQSTAGPQTTAAQMMAEEVAPADVSIDLV
ELRDDQEPDFPVVELGRLDEMINRPRWVVPVLPKGELEVLLDTTIKLCKEGLDTRSEPCQ
RFFREGLTISFTKIMTDEAVSGWKYEIHRCILKNAEKLIELVVTKLSQDWFPLLELLAMV
LNPHCKFHIYNGSRTSESVQAGTENVEGVCALPPDPRNPKGWLVDLVNKFGKLGGFQILL
DRFKDGPQLSVPVVAALIKPFGQCAEVLTPQTVEQYFLPIVEVVPKFLNELTDEELKKES
KNEAKNDALSSIIKGLKQLVNRLPNQDDTIKSLEGFRLKMILRLLQISSFNGKMNALNEV
NKVISNVSFQSSRHSQMEEDEWLTADKMAEWIQKNGVLTIVLRDSLHQPQYVEKLEKILR
FMIKEKALTSDDLDKLWEAQSGKHDAIVKNVHDLLAKLAWDFSPEQLDHLFECFQVSWTH
ASKKQREKLLELIRRLAEDDKEGVMAHKVLGLLWNLAHSEDVPTEIMDQALTAHIKILDY
SCSQDRDAQKMTWITKFVEELKNDKWVLPALKQIREICQLFPESPQNFPHAPQRASHVYY
RNTVIAQLQSNHSIVMLVATNLSNYMKKARELARDHPALDSSNILPDGRFNHVQQIQERL
RFLRFLLKDGQLWLCESQARQIWQCLAESAIYPSDRESCFKWFAKLMGEEPDLDPEITKD
FFEQNILQLDPSLLTENGMNCFERFFKHVNQKENKIIAKRRGGHLMDDLELIGMDYMWRV
VLLSPDDVANKAIILLKDIYTNLGPRLQQNQVEIHDDFIQSCVDRLKALYDTVSVLEKDK
DSTNRVMQETTRMVRVLTVLREYVAECDEAYTEERSILPLSRACRGKLVTLIIRFPSQGR
QMDDIDIWSHTNDTIGQVRRQVLCKIKASSNIKMDLYANGELLDPVEDKRLISQIPLREK
SLITAKLIQVGSNMPSSPDSSSDSSAGSPHHTFDGPNIEAENCLPGVIIANNYRYTQFLF
QLSDLGCQLQVPRLRDTARAVLKLMPADVHTIDQLKSVCAEHSRGETTYSHDLEAMFFTP
SATQALYNIEVAYSLLMPATETTSDDAFEFQFNFVKNGGVQLAMNMLTKNNFLPSADLPT
RRAAYITVMKICKLMLTTVSHAKFQVVVEACSADPQSPNITQAEHSHALILQQALQFIPN
PGAEVMTRMVGLRLGQQLLDQEMYTEAAKFAPDMSVIKAIQRIAWASSSSSLHLVHATNE
EIHKALEKRQDHVEMEDLTVARESLEVLTVCLMLCPPALEALNKDKSWQTFIKDLLLHCK
NRPVRVAAAEQFCLMATRCCGGTRPMVFFITLLFCELSETVKENAKQAHEYFNLLWKLLN
YASASEVKLPNAEKQLNNEIQWIKKTKDHVINSEEVIVEDALLEGHLGITRELLAFQSPE
KKFHIGSEKGGSNLIKELVEDFLFPASKIVLQSRKTGGEFPLVTAVPVCAMPPTVIAAFD
LLVALCTNCVPNLKCVAHMLLEMFYHGEPPLTEWEYLPPVGPRPLKGFVGLKNAGATCYM
NSVLQQLFMIEEIRNGILSVEGVAEDVIDEEYGEEKTENESNVDMGEEERKDEEKPVAIN
RDEERKEYNLGVLKRIQLIFGHLASSKLQYYVPKGFWKHFKLWGEPVNLREQHDALEFFN
SLVDSLDESLKALGQPPVLSKVMGGSFADQKICKDCPHRYQREEPFTTLNVDIRNHQNLL
ESLEQYVKGDLLEAANAYHCEKCNKKVDTVKRLVIKKLPKVLAIQLKRFDYDWERESAIK
FNDYFEFPREFDMEPYTVQGLAKIEGEIIDDDIENKEQSTKYKLFGVVVHSGQASGGHYY
SYIFHREDNQPKWYKFDDGDVTECKMEDDEEMKNQCFGGEYLGEVFDHMLKRMAYRRQKR
WWNAYILFYERQDERDEKDIYKTLQDLSIVNKPSQIKMPSCIEKCVRKQNIMFMHERSQF
CPEYFQFMKKLLNCNPVFTHGTQDKLSQDMENLAMISTELASKFLFSVGFHTKKTLRGAA
NEWYEALNCHLRSSKKVRNWFAHNVLFSHTNRFAEYLLECPSSEVRNAFSKIIVCLAHFA
LKDGPCPPPLVQGLYGPGQQADPNATLSDHLLLAVLQLLRKEVSDHGRHLQQYFHLFLMY
ANLGEQEKVQLLKLNVPSLFMLVALDEGPGPPIKYQYAELNRLYSVVSVLVRCCDVSSRC
LSSNQGDPPKSNPYGDPSISQPLMPLQPQVADLLYGKTGYVKKLIEDCNNSEDTCKLLRF
CSWENPHFSSTVLSELLWQVAYSYTYELRPYLDLLLQMLLLEDSWQNHRIHNALKGIPDD
RDGLFDTIQRSKNHYQKRAYQCIKMMVSLFTLCAPATEMLQSNGDVKRKWSWAVEWLNDE
LERRPYPGNAQYTYNNWSPPAQSNETSNGYFLERSHSARVTLSKAYELCPDEEPDDAELS
DEQETPPSDENPPGYQAKKSPQQGTSSKSEMGTSQQKQDGSTNQQFQNNHMNSSHNSQQP
VVPHDQIVNQLNNQNNSQTGENPDTGEEENKTNKD
NT seq
7668 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgtaatgaaagggggtcaatctgggggagatgcccctcaagacactccatca
caccaaggaacaagccaggtttccccctcagcctcccagagcactgctggaccgcagaca
actgcagcacagatgatggcagaagaagtagctccagcagatgtgtccattgatttggtg
gaattaagagatgaccaagagccagactttcctgtggtagagttgggacgactggatgaa
atgattaatagacctagatgggtggttcctgtactgccaaagggagaactagaggtttta
ttggacactaccattaagctctgtaaagaaggtttagatacaagaagtgaaccttgccaa
agattctttagagaaggattaacaatatcattcacaaaaataatgactgatgaggcagtt
agtggctggaagtatgaaatccatcgatgtatactgaaaaacgcagaaaagctgattgaa
ttggttgtcacaaaactgtctcaagactggtttcctttactggaactgttagctatggtt
ttgaatccacattgcaagtttcatatatacaatggaagccgcacatcagaaagtgttcag
gctggtactgaaaatgtggagggtgtgtgtgctcttccccctgatcctaggaatcctaaa
ggatggctggtggacctggtaaataagtttggaaagttgggtggatttcagattttgctg
gacagatttaaagatggtcctcagctctctgtgccagttgtagcagcattaattaaacca
tttggtcagtgtgctgaggttctcactccccagaccgtggaacaatacttcttacctatt
gttgaagtagttccaaaatttctgaatgaattaacagatgaggagctgaaaaaggaatca
aaaaatgaagccaaaaatgatgcactgtcatctatcatcaaaggactgaagcagctcgta
aatagactaccaaatcaagatgatactataaaaagcctggagggtttcaggctcaaaatg
attcttaggttactacaaatctcttccttcaatgggaagatgaatgccttgaatgaagtt
aacaaggtcatttctaatgtctcgttccaatccagtcgtcactcccagatggaagaggat
gagtggcttacagcagacaaaatggctgaatggattcagaaaaatggagtattgaccatt
gttttacgagacagtctccaccaaccccagtatgtggagaaattggagaagatactaaga
tttatgatcaaggagaaagccttgacctcagacgaccttgacaaactctgggaagcacag
tcagggaaacatgatgccatagtgaagaatgtgcatgacctgctggcaaaactagcatgg
gatttctcaccagaacagctagatcacctctttgagtgttttcaggtgagctggactcat
gcatcaaagaagcagagagagaaattgctggagctgatacgcagattggcagaggatgac
aaagaaggggtcatggcacataaggtcctggggttattgtggaacttggcacacagtgaa
gatgttccaacagaaattatggatcaggctctgactgcccatatcaaaatcctagactac
agttgctctcaggaccgtgatgcccagaagatgacctggataacaaaatttgtggaagag
ttgaaaaatgacaaatgggttttgccagcattaaagcaaattcgtgaaatttgtcagcta
tttccagagtctccacagaattttccccatgcccctcagagagcctctcatgtatactat
cgcaacactgttatagcacagcttcagagtaaccattccatagtcatgttagtggctaca
aatctctccaattacatgaagaaagccagagaactggccagagatcacccagcactagat
tccagcaatattttaccagatggaagatttaatcatgtacaacaaatacaggaacggctc
aggtttttaaggtttttgctaaaagatggtcagctatggttatgtgaatctcaagcaaga
cagatatggcaatgcctagcagagagtgcaatttatccctcagacagagaatcttgtttt
aaatggtttgctaagttgatgggagaagaaccagacttggatccagaaataacaaaagat
ttttttgagcaaaacattttacaacttgacccaagtctgttgacagaaaatggaatgaat
tgctttgagagatttttcaagcatgtgaatcaaaaagagaacaaaattattgccaagaga
agaggaggtcatctgatggatgaccttgaactcattggaatggattacatgtggagggtt
gtgttgttaagccctgatgatgtagcaaacaaggcaatcatcttactgaaagacatttat
acaaacctgggacctcgtttacaacaaaatcaggtagaaatccatgatgatttcatacag
tcgtgtgtggaccgactaaaggccctgtatgacaccgtcagtgtgctggagaaggacaaa
gatagtacaaatagagtgatgcaggagaccaccaggatggtacgagtgttgacagtgctc
cgggaatacgtggcagagtgtgatgaggcctacacagaggaacgatctattctcccactc
agcagggcatgtcgaggaaaattagtgactttaataataaggtttcctagtcaaggacgt
cagatggatgatatagacatttggtctcatactaatgatactattggacaagtccgtaga
caggtgctgtgtaaaattaaagccagtagcaatattaaaatggacttgtatgcaaatggt
gaacttcttgatccagtggaggacaagagacttatttctcaaattccgttacgagaaaaa
tcactgataacagccaagttgatacaagtgggaagcaacatgccgtctagtcctgacagc
agttcagatagttctgctggttcccctcatcacacatttgatggtcctaatatagaggca
gaaaactgtttaccaggggtgataatagcaaataattaccgatatacccagtttctgttt
caactgtcggatctgggctgccagctacaggtacccaggctccgagatactgccagagcc
gtattaaagctcatgccagctgatgttcatacaatagaccagctgaagtctgtatgtgct
gaacacagccgaggagagactacatactctcatgatttggaggctatgttttttacccct
tcagcaactcaagctctgtataatattgaggttgcatacagtttgttaatgccagcaact
gaaacaacatcagatgatgcatttgaattccaatttaactttgtgaaaaatggaggtgtt
caattagcgatgaatatgttaaccaaaaacaactttctaccctcagctgatttaccaact
agaagggcggcgtatattacagtgatgaagatctgtaagctcatgcttaccactgtcagt
catgccaaatttcaagtggtggtagaggcatgcagtgcagatccacagtctccaaacatc
actcaagcagaacacagtcacgccctaattcttcagcaggccctacaatttatacctaac
ccgggggcagaggtcatgacaaggatggtcggattaaggctgggtcaacagttgcttgac
caggagatgtatactgaggctgccaagtttgccccagatatgtctgtgataaaagccata
cagaggattgcctgggcttccagcagcagttctctacatttagtccatgccactaatgag
gaaatccacaaagcacttgagaagagacaggatcatgtcgagatggaggatctgactgtg
gcgagggaatccctggaagtcctgacggtctgtctgatgttgtgtccgcccgccctggag
gccctgaacaaggacaaatcatggcaaacatttatcaaggatcttttactgcactgtaaa
aacagacctgtccgagttgctgctgcagaacaattctgtttgatggccactcgatgttgt
gggggaacacgcccaatggttttcttcatcacccttctcttctgtgaacttagtgaaact
gtgaaggagaatgcaaagcaagcccatgaatactttaatttattgtggaaattgctaaat
tatgcgtcagcctcggaggtcaagctaccaaatgctgaaaaacagttaaataatgaaata
cagtggataaaaaaaacaaaagatcacgttattaactcagaggaagtgatagtagaggat
gcgctgttagaagggcacctgggaattactcgtgaattgttagcattccagtcaccggaa
aagaagtttcacatcgggtctgaaaagggaggatccaatctcataaaggaactggtagaa
gattttctctttcctgcatcaaagatagttttacagagcagaaagacaggtggtgaattt
ccgttagtgaccgctgttcctgtgtgtgccatgcccccgactgtgatagctgcctttgat
cttttagttgcactctgtacaaattgtgtgccaaacttaaagtgtgtagctcacatgctg
ttagagatgttttatcatggtgagcccccgttaactgaatgggaatacctacccccagtt
ggtcctaggccactgaaaggttttgtgggcttgaaaaatgcaggagcaacatgttacatg
aattcagtgttacaacaactcttcatgattgaagaaatccgtaatgggattctgtcagta
gagggagttgctgaagatgtgattgatgaagagtatggagaagagaaaacagagaatgaa
tccaatgttgacatgggtgaggaggaaagaaaagatgaagagaagcctgtggctatcaac
agagatgaggagaggaaggagtacaatctcggggttctcaagaggatacagctcatcttt
ggtcatctagcgtcaagcaaacttcagtactatgtgccaaaggggttttggaaacatttt
aagttatggggagaacctgtcaatttaagggaacagcatgatgcactagagtttttcaac
agtttagtagatagtttggatgagtcgttaaaagctctgggacaaccaccagtcctgtca
aaggtcatgggaggatcatttgcagaccagaaaatttgcaaagattgtcctcacaggtac
caaagagaggagcccttcactacactgaatgtagatatccgtaatcaccagaacctgctg
gagtctctggaacagtatgttaagggtgaccttctagaggctgctaatgcttatcattgt
gaaaagtgcaacaagaaggttgacacggtgaagagattagtcattaaaaagcttcccaaa
gttttagcaattcaactaaagagatttgattatgactgggaaagagaaagtgctataaag
ttcaatgattatttcgaatttccgagagaatttgacatggaaccttacactgtacaagga
cttgcaaaaattgaaggtgaaatcatagacgatgacatagagaacaaagaacagagcaca
aagtacaagttgtttggagttgtagtacacagtggacaagccagtgggggacattactat
tcctatatctttcacagagaggacaatcaacccaagtggtacaagtttgatgatggtgat
gttacagaatgtaaaatggaagatgatgaggagatgaaaaaccagtgttttggaggagaa
tacctcggagaagtgtttgatcacatgctgaaaagaatggcatacagacgacaaaagaga
tggtggaatgcatacatacttttctacgagcgacaggatgagagagacgagaaggatatc
tacaaaaccctccaggacttatcgatagtaaacaagccttcccaaattaaaatgccaagc
tgtatagaaaagtgtgtacggaagcagaacatcatgtttatgcatgagaggagtcagttc
tgccccgagtactttcaatttatgaaaaaattactcaactgtaatccagtgtttactcac
ggaacacaggataaactttcacaagatatggagaatctagcaatgataagcacagagctg
gcatcgaagttcctgttcagtgtgggatttcacaccaaaaaaaccttaaggggtgcagcg
aatgagtggtatgaagcgttaaactgtcacctaaggtccagtaaaaaggtcaggaattgg
tttgcgcataatgtgttgttctcccacacgaaccgatttgcagagtatttactggagtgc
ccttcatcagaggttaggaatgccttttcaaagatcattgtttgtttagcacattttgcc
ctgaaggatggaccgtgtccgccacctctggttcaaggtctctatggtccaggacagcaa
gcagatcccaatgcgacactgagtgaccacttactgctagccgtcctgcagttactgagg
aaggaagtatccgaccatggtcgccatctacagcagtacttccacctcttcctcatgtat
gccaatcttggggaacaggagaaagtacagctgctgaagctgaatgtgccgtccttgttt
atgctggtagcattagatgagggtcctggacctcccataaaataccagtatgctgagctg
aatcgactgtattctgtagtctcagttctggtgcgatgctgtgatgtttcatcccgatgt
ctttcatcgaatcaaggggatcctcctaaatcaaacccatacggagatccctcaattagc
cagcctctgatgccgctccagccccaagtggcagatcttctgtacggcaaaacaggatat
gtcaagaagctgatagaagattgcaacaattctgaggacacttgtaaacttttaaggttc
tgtagctgggaaaatcctcatttctcatccactgttctgagcgaactcctatggcaggtg
gcctattcttacacctatgagttaagaccttacttagatctgttgctgcagatgttgttg
ttagaggattcctggcagaatcacagaatccataatgctctcaaaggaataccggatgat
agagatggtttgtttgataccattcaacgatccaaaaatcactatcagaagcgagcctac
caatgtatcaaaatgatggtgtctttatttactctctgtgcacctgctacagagatgttg
cagagcaatggtgatgtgaaaagaaaatggagctgggcagtggaatggttgaatgacgag
ctggagcgccgaccttacccgggaaatgcccagtatacctacaacaactggtccccacca
gcccagtcaaatgagacttctaatggctatttcttggagaggtctcacagtgctagagtg
accttgtcaaaagcctatgaactttgtccagatgaggaacctgatgatgctgagctgtca
gatgaacaagaaacaccaccctcggatgaaaatccacctggttaccaagccaagaaatct
ccacaacaagggacatcaagcaaatcagaaatgggcaccagtcaacagaaacaagatgga
tccaccaatcaacagtttcagaacaatcatatgaactcttcccataattcacagcagcca
gttgtcccacatgatcagattgtcaatcagttaaacaaccagaacaactcccagacagga
gagaatcctgatactggggaggaggaaaacaagacaaacaaggactga
DBGET
integrated database retrieval system
