Ostrea edulis (European flat oyster): 125659137
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Entry
125659137 CDS
T09123
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125659137
Transcription factors [BR:
oed03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125659137
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125659137
NCBI-ProteinID:
XP_048746651
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All DBs
Position
9:26600065..26602059
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AA seq
263 aa
AA seq
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MSSCDDMSPQDLSSRGDPCDYGDTSKLGGNGGEHVKRPMNAFMVWSRGQRRKMAQDNPKM
HNSEISKRLGAEWKLLSEEDKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSLLKKDKYP
FPMAMPMIPGISHLGGLPPGFGSMAPVSEGMSLNEKMRAFLPPTSSHGPFSHIDGSGKLD
NGVSTLTAQDRLYSPYLSALNAHSSSAAAALSGMPPAAHSHPGQYLLPYCPPSYMPAQSD
ISRPVAYVFVKPEDHYARHPTMI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctgtgatgacatgagcccacaagacttatcttcgagaggggacccttgtgat
tatggggatacctcaaaacttggtggcaatggaggggagcacgtgaaaagacccatgaac
gctttcatggtgtggtcacgaggacaacggagaaagatggcccaggataatccaaaaatg
cataactcggaaatcagtaaacgactaggtgccgagtggaaattgttatcggaagaggat
aaacgaccatttatcgatgaagcaaaacgacttcgtgctcttcatatgaaagaacatccg
gattacaaataccgtcctagaaggaagcccaaatctctgctcaagaaggacaaatatcct
tttcctatggcaatgcccatgatacctggaatcagccatctgggtggcttacccccggga
tttggttctatggcccctgtatcagaaggtatgtcattgaatgagaaaatgagagcattt
ttgcctccgacttcttcgcacggtcctttcagtcacatagatggaagtggtaaattagac
aatggcgtgagtaccctgactgcacaggacagactttattctccgtatctatcggcctta
aacgcccactcctcctctgccgccgccgctttaagcggcatgcccccagcggcacactct
caccctggacaatatcttctaccgtattgcccgcctagctatatgcccgcgcagagtgac
atttcgcgtcccgtggcgtacgtatttgtgaaaccagaagatcattatgcccgacatcct
accatgatctga
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