Ostrea edulis (European flat oyster): 125659146
Help
Entry
125659146 CDS
T09123
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125659146
Transcription factors [BR:
oed03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125659146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125659146
NCBI-ProteinID:
XP_048746663
LinkDB
All DBs
Position
9:18415796..18420736
Genome browser
AA seq
331 aa
AA seq
DB search
MEYQEHPEQDLSKPGQTQLPPSSQGMHVPVNPQHAGMHVSHSHVQQPPQQHSPNSQTNLN
GSGAGSPNSGVNKKDVDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL
SEAEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKTLMKKDKYALPGMPTGAPLQPGREA
QMYPMGGYMPNGYPGMMHDANAYMNQMSLAGQYGYMPPQQMSGNQMTSGSYMNGSSSYTM
SMAGMAPYPSMSPSQMTGGVKREPTPGSGPQGPGRPTNPGDLREMISMYLPTGDGSDPHS
AQQRLMHQAHYQPPPPSSETGVNNGVPLTHM
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaggaacatcccgagcaggatttgtcaaagcctggacaaacacagctaccc
ccatcttctcaaggaatgcacgtgccggtcaacccacagcacgcgggaatgcatgtttcc
cattctcatgtccagcagcccccacaacaacactcgcctaactcccaaaccaacctcaac
ggcagcggggctggatcccctaattcaggagtcaacaaaaaagatgtggacagagtcaaa
cggcctatgaatgccttcatggtgtggtctcgcggtcagagacgaaaaatggcccaggaa
aacccgaaaatgcataattccgaaataagcaagagacttggtgctgagtggaaattgtta
tccgaggcagaaaaacgaccgtttatagacgaggccaagagacttcgtgccatacatatg
aaggaacaccccgattacaaatacagaccacgaaggaaaacgaaaactctcatgaagaaa
gataagtacgccctaccaggaatgcccacaggtgcccccctccagcccggtcgagaggca
cagatgtatccaatgggagggtacatgcccaacggatacccgggaatgatgcacgacgcc
aatgcatacatgaatcaaatgagcctagcgggacagtacggatacatgccaccacaacaa
atgtccggaaaccagatgacatccggatcctacatgaacggaagctccagctacacaatg
tccatggccggaatggccccctacccctcaatgtctccctctcagatgactggtggtgtc
aaacgagagcccacccctggttctggtccgcagggacctggacgacccacgaatcccgga
gatttacgtgaaatgatcagtatgtacctacctaccggcgatggttctgatcctcatagt
gctcaacaaagactcatgcatcaagctcattaccaaccccctccgccatcctctgaaacg
ggggtaaataacggggtcccactgacgcatatgtaa
DBGET
integrated database retrieval system
