Ostrea edulis (European flat oyster): 125659245 Help Entry 125659245         CDS       T09123                                  Name (RefSeq) THO complex subunit 3-like   KO K12880   THO complex subunit 3 Organism oed  Ostrea edulis (European flat oyster) Pathway oed03013   Nucleocytoplasmic transport oed03040   Spliceosome Brite KEGG Orthology (KO) [BR:oed00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     125659245   09122 Translation    03013 Nucleocytoplasmic transport     125659245  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oed03019]     125659245    03041 Spliceosome [BR:oed03041]     125659245 Messenger RNA biogenesis [BR:oed03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      125659245 Spliceosome [BR:oed03041]  Complex C   Other components    EJC/TREX     125659245  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     125659245 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_Gbeta eIF2A WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_Vps41 DSE1_N RMC1_N Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Tricorn_2nd TRM82_WD Beta-prop_TEP1_C Beta-prop_WDR75_1st CFAP251_N ASA1 PAC11 Beta-prop_EIPR1 PD40 Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 B-prop_COPA_B_2nd Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_ELP1_1st Beta-prop_SCAP Cytochrom_D1 Beta-prop_WDR75_2nd PROPPIN Beta-prop_DCAF4 Beta-prop_Nup120_160 DPPIV_N WD_LRWD1 Beta-prop_NWD2_C DNAI3_WD Motif Other DBs NCBI-GeneID:  125659245 NCBI-ProteinID:  XP_048746809 LinkDB All DBs Position 9:37744334..37760704 Genome browser AA seq 323 aa AA seqDB search MASYIETMRKHFQQNKRIREHTAHDSKVHSVAWSCDGRRLASGSFDKTVSVFQLDNDRDR MVKDCTFRGHSDSVDQLCWHPKNPDQLVTASGDKTIRIWDARTNRSVATVNTKGENINIC WSPDGSTIAVGNKDDLITFIDVRSHRSKAEEQFKFEVNEISWNNDGDLFFLTSGQGSINI LSYPDLKLQHSLNAHPANCICIEFDPKGKYFATGSADALVSIWDVAELACIRTLSRLEWP VRTLSFSHDGRMLASASEDLIIDIAEVDSGEKITEITCEAPTFTVAWHPKRPLLAYACDD RDTYDRNRDAGTIKVFGFPSDNS NT seq 972 nt NT seq  +upstreamnt  +downstreamnt atggcgtcttacattgaaaccatgcgaaaacactttcagcaaaacaagcgaatacgggag cacactgcccatgactccaaagtgcactccgtggcgtggagctgtgatggtcggcgtctg gcttctgggtcttttgacaaaacagtcagcgtctttcaactggataacgacagagaccga atggtgaaggactgcacattccgcggacatagcgacagcgtagatcagctctgttggcat ccgaagaatccggatcagctggttacagccagtggagacaaaacaatacgaatatgggat gccaggactaaccgatctgtggcgacggtgaatactaaaggtgaaaacataaacatttgt tggtcaccagatggcagcactatagcagtagggaacaaagatgacctcatcacatttata gatgtcaggagtcataggtcaaaggcagaggagcagttcaaatttgaggtcaatgaaatt tcctggaacaatgatggggatctcttttttctgaccagtggtcaaggcagcatcaatatc ctgagttacccagacctgaagctccagcacagcctgaatgctcaccctgccaactgtatc tgtatcgaatttgaccctaaggggaagtactttgctactggtagtgccgatgccttagtc agcatctgggatgtggcagaattagcctgcatcagaaccctctccaggttggagtggcca gttagaacgttaagtttcagtcatgatggtagaatgctagcatctgcctctgaagatctc atcatagacattgcagaagtggattcaggggagaagatcacggagattacatgtgaagca cccaccttcaccgtagcttggcatcccaagcgccctctgctggcctacgcatgcgatgac agggacacttacgacagaaatcgtgatgcaggaactatcaaggtgtttggattccccagt gataattcatga

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