Ostrea edulis (European flat oyster): 125659847
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Entry
125659847 CDS
T09123
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oed04054
]
125659847
Pattern recognition receptors [BR:
oed04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
125659847
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
125659847
NCBI-ProteinID:
XP_048747592
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Position
9:6752472..6755944
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AA seq
695 aa
AA seq
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MRMSTMINMLWIFVTIEMCVVLGQNQSNCPIKSCACKNQKATCKNHGKNLTFIPHLPSDI
TRLEFVDNLLPTLGLSVFSNISNLGLKCLILRRNQIYRIDTRAFNVLHQLEMLDLSDNKM
SVPQVRNAFVSLQNTKLQILCISAMHLRVLSEDFFFHMKNSNLTQVIMNNNWLDTFEAMV
FIVPPKLQKISLAQNNISSVSLNKQLHLLEELDLSKNNIRTVPLFCNRTSEPYLPRLKVL
DISSNLISKIKPRAFLGTCLPNLTHLIISDNKIESLPNKMISRLVNLVSLSIRNLGDNIV
IGPWALNSSSLKYLHMENRFNIFERPEYEMLFWGCPNLIFLDMTDVQFTHQNETKSKVFT
LFSPLHRLQDLILKGTSLSVLPENLFSGMLKLTNLSLENCKLSQWTNEVFSKAVSLKFLQ
LGHNLISIVNQTSLPLRVEKIGLQGNPFLCSCDLVWFREWIQENSNKLSGWSTDYTCKQP
SSWMGKNLKDFHLSYMYCHPLNPITILGISISVVAVVILVASGVLYHYRWHIKYHLYLLR
AKSRGYEALPGCEFVYDVFIAYNSNDRVWVISEMIPILEKQENMKLCLHERDFEVGKMII
DNITDTMQRSRKILLILSNNFAESHWCRFETMMAQIRSMKDGENMVVVILLERIQTKNIT
NSLHVLLNTTTYIEWKNKENEKELFWQRLVSALKS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtctacaatgattaacatgctttggatttttgtaacgatagagatgtgtgtt
gtgttaggacaaaatcaatcaaattgtcccatcaaatcatgtgcttgtaaaaatcaaaag
gcgacttgtaaaaatcatggtaagaatttgacatttattcctcatctaccgtcggatata
accaggctggaattcgtagacaacttgttgcctaccttgggacttagtgtgttttccaat
atatcaaaccttggcttgaaatgcctcatactgagaagaaatcaaatctaccgcattgat
actcgagcgttcaatgttcttcatcagcttgaaatgttagaccttagcgacaacaaaatg
agcgtgccgcaagtacgaaatgcttttgttagcctgcaaaatactaagctacaaatatta
tgtatctcagctatgcatttaagagtcctttcggaagactttttcttccatatgaaaaat
tccaatctgacacaagtgatcatgaataacaactggcttgacacattcgaggcaatggtg
tttattgtgcctccaaaattgcagaagatatctttggcacaaaataacatatcaagtgtg
agcttgaataaacaactacatttgcttgaagaattagatttaagtaaaaataatatacgt
actgtccccttgttttgtaacaggacatctgaaccttacctacctaggctaaaagttctt
gatattagcagtaatcttatttcgaaaatcaaaccgagagcatttctaggaacttgtcta
ccaaatttaacacatctgatcataagtgacaacaaaattgaatctctaccaaacaaaatg
ataagccgactagtgaatcttgtgagtctgtcaatcagaaatttaggtgacaatattgtg
attggcccttgggctctgaacagttcatctttgaaatatttgcacatggaaaatcgtttt
aacatattcgaaagaccggagtatgagatgttattctggggatgtcctaatctcattttt
ctggacatgactgatgtacaattcacgcatcagaatgaaacaaaaagcaaagtctttacg
ctgttttcacccttgcacagattacaagacttgattttaaaaggtacctctttgtctgta
cttccagagaatttattttcaggcatgttaaaattgacaaatctttccctggaaaattgc
aaattaagtcaatggacaaatgaagtattttcaaaggctgtgtcgctaaaatttctacaa
ctaggtcataatttgatatcaattgtcaatcaaacatcattgcctctacgtgttgagaaa
attggcctacagggaaatccttttctatgctcctgtgatcttgtctggttccgagaatgg
attcaagaaaattctaacaaactttcaggttggtcaactgactacacttgtaagcaacca
tctagttggatgggaaaaaatttaaaggacttccatctgtcgtacatgtactgccatccg
ttgaaccccatcacgattctgggaatctctattagtgttgttgcggttgtcattttagtt
gcatctggagttttgtatcactatcgatggcacataaaatatcatttatacttattacga
gcgaagagtcgcggctatgaggcacttcctggctgtgaatttgtatacgatgttttcatt
gcatataattcgaatgaccgtgtgtgggtgatatctgaaatgataccgatattagagaaa
caggaaaatatgaagctctgtttgcatgagcgagactttgaagtcggcaaaatgatcatt
gataacattactgacacaatgcagaggagtagaaagatattgcttattttgtccaacaac
tttgctgaaagtcattggtgtcgttttgaaactatgatggcgcagattcgatctatgaaa
gacggtgagaatatggtagtagttattcttctggaaagaattcaaacaaaaaatatcaca
aactcgctgcatgttttgctcaatactactacttacattgagtggaaaaacaaagaaaac
gaaaaagagttattctggcaaagactagtttctgctttgaagtcctaa
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