Ostrea edulis (European flat oyster): 125659860 Help Entry 125659860         CDS       T09123                                  Name (RefSeq) collagen alpha-2(IV) chain-like   KO K06237   collagen type IV alpha Organism oed  Ostrea edulis (European flat oyster) Pathway oed04382   Cornified envelope formation oed04512   ECM-receptor interaction oed04518   Integrin signaling oed04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oed00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125659860    04518 Integrin signaling     125659860  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     125659860  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     125659860  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:oed04147]     125659860    00536 Glycosaminoglycan binding proteins [BR:oed00536]     125659860 Exosome [BR:oed04147]  Exosomal proteins   Exosomal proteins of other cancer cells    125659860 Glycosaminoglycan binding proteins [BR:oed00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125659860 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  125659860 NCBI-ProteinID:  XP_048747611 LinkDB All DBs Position 9:complement(48654445..48704948) Genome browser AA seq 1800 aa AA seqDB search MPLERKNCSCAPCAKSQDRKNHSAFKTHSNSKAMKSWLLLCVASLYISSTVQVYAQDLKE CGVNCQRNNGCKCVGEKGSRGIPGALGPPGPQGVQGYPGMEGLPGQKGQKGDDGPLGLTG PKGDRGKMGMPGFPGINGIPGIPGPTGPRGPSGMDGCNGTQGEPGNPGSNGLPGPVGPPG LPGLKGQKGESSTGVAIKGQKGEPGVEGFQGLQGPPGRDGPSGFPGLPGPEGPRGFDGLI GEKGDKGFPGLKVKGPQGDTGEPGNVGPPGPPCDGNEELTQPNMTQIGPKGQKGERGFSG ADGLPGLPGTKGDQGFPGMKGPVGMDGEKGVPGIAGPRGKQGLPGLPGLPGLKGDRGMDG LPGLNGLQGEKGNQGYSGLKGEKGYRGPPGPSGGEGGDGPEGQKGERGPSGERGYPGLDG LMGLPGPPGRTGPLGGPGTQGLPGPEGPPGLKGDKGDKGNAGLPGIDGLAGQPGFLGEKG DPGLKGNPGLSIPGLKGGDGVPGRDGLPGRKGETGFRGLPGIPGNSTRGRPGRPGPKGSK GNSGFPGLSGRDGLPGLPGDKGDRGGSCRDCLPGLKGEKGTPGRPGSAGIPGEIGRTGSK GDPGGRGDDGVPGFSGQRGERGQPGLPGGSGFKGNKGEPYILELDTISDMCRKGEPGQPG PAGEQGLAGVQGPQGPRGPDGVPGLRGSKGDRGRDGNDGIPGQSGLPGLKGDKGVPGYGV PGLSGERGLPGENGLPGANGMKGERGIPGETIDINVDLLKGTKGEAGFPGNPGIPGRDGL PGLKGDSGNSGLPGMDGLPGMKGERGFDGIPGDAGPRGLPGARGERGADGPPGQPGFDGR PGESGPQGLPGIKGESGLPGRDGLSTRGEKGDAGLPGLNGPRGQPGFPGTDGQPGQDGLP GMKGDSGPSGLPGLPGSAGQKGEPGQIGPEGTRGLSGEDGRPGVPGLVGAKGDAGLPGIK GLSGFPGERGEAGVAGRPGAPGLDGPQGPPGLPGERGRDGAPGTKGETGFVGIPGEPGRD GNPGLPGLQGMKGDRGFPGIPGEQGRNGEPGQKGDRGPNGLPGLQGVPGEDGLPGPKGES GRPGSPGNSGLPGQDGLPGLNGMKGEQGLPGVGIPGESGIPGERGRDGSPGLPGMKGDPG QQGLPGFPGMKGERGFRGQPGQSGRPGDDGLPGMKGNPGLNGIPGRAGIKGDSGLNGIPG RDGQKGEPGLTGTPGERGQTGLKGERGLNGLPGTPGVSGFPGAKGDRGRDGLNGLPGAKG DAGLPGRDGLPGEKGENGFPGPEGREGLPGMKGERGPEGPLGGKGEPGRSITGIKGEPGI PGEQGRDGFPGMKGDGGLPGQPGLPGMKGDTGVGFPGAKGERGVPGLNGIPGEQGSTGIP GEPGQPGFPGIKGGVGDRGVPGLPGLKGLPGPQGPPGERGTSGLPGISGQKGDRGFPGQD GLEGRKGDEGQSGLPGLPGNKGDKGFPGFKGEPGPGAIIRPDMRIKGEPGQTGDSGFPGT PGLTGEKGNPGQKGERGFSGIPGERGIQGFPGMKGESGFPGAPGTPGDDGFPGPQGPTGD AGFPGPPGRTPPSGFLVVRHSQSETEPICPDNTARIWSGYSLLYIEGNERSHHQDLGWAG SCMQRFSTMPFLFCNTNNVCNYASRNDKSYWLSTNEPMPMMPVRDPELRRYISRCVVCDA PANVIALHSQEMSIPECPVGWSGLWIGYSFAMHTGAGPSGGGQSLSSPGSCLEDFRATPF IECNGSGGTCHFYANKYSFWLTTIDQRQNDFATPVQETLKAGNLRTRVSRCQVCMKTTRP NT seq 5403 nt NT seq  +upstreamnt  +downstreamnt atgccgttagaacgcaagaactgtagttgtgcgccgtgcgccaaaagtcaagacaggaaa aaccatagtgctttcaaaactcacagtaactctaaagccatgaagtcatggctcctactc tgtgtagctagcttatatatatcaagtactgttcaagtgtatgctcaagacttaaaggaa tgtggagtgaactgtcaaaggaataatggatgtaaatgtgttggtgagaaaggatctcgg ggtattcctggggcacttggaccccctggcccacagggtgttcagggttaccctggcatg gaaggacttccaggacaaaagggacagaaaggtgatgatggcccattaggacttactgga ccaaaaggagacagaggaaaaatgggaatgcctgggttccctggtattaatggaattcct ggtattcccggcccgactggacccagaggaccctccggtatggatggctgcaatggaaca cagggagagcccggtaacccaggatctaatggacttcctgggccagtgggcccacctggt ctgcctgggctcaaaggtcagaaaggagaatcatctacaggagttgccattaagggtcaa aagggagagcctggtgtggaaggatttcaaggtcttcagggtcctcctggtagggatggc ccctcaggatttccaggattgccaggcccggaaggaccaagaggatttgatggactgata ggcgagaaaggagacaaaggattcccaggtttaaaggtcaaaggcccacaaggagacaca ggtgaacccggaaatgtaggacccccaggccctccttgtgatgggaacgaggaactgaca caacccaatatgactcagataggacccaaaggacaaaagggagaaaggggcttttcaggt gctgatggacttcccggactgcccgggaccaaaggagatcaaggtttccctggtatgaaa ggtccagtaggaatggatggagagaagggagttccgggcattgctggaccaagaggcaag cagggattgccaggtcttcctggtttaccgggtttaaagggagacagagggatggatggt ctacctggattgaatggacttcaaggtgaaaaaggaaatcaaggttattctggccttaaa ggagagaaaggatataggggacccccaggacccagtgggggagagggcggagatggccca gaaggacagaagggagagcgtggtccatcaggagaaaggggataccctggtttagatgga cttatgggattgccaggtcctcctggaagaacaggacctcttggagggcccggcacacag ggactgcctggcccagaaggcccacctggactcaaaggagacaaaggagataaaggaaat gctggtttacctggaattgatggcttagctggtcaacctggatttcttggtgagaaaggt gacccaggtctgaaaggaaatcctgggttatcaattcctggacttaaaggaggtgatggt gttcctggccgagatggattacctggacgaaagggagagactggatttaggggacttcct ggtattccaggaaattccacaagagggcgccctggacgtcctggacccaaaggaagtaaa ggaaattctggattccctggtctaagtggacgtgatggtctcccaggtcttcctggagat aaaggtgacagaggaggttcctgtagagattgtttacctgggttaaagggagaaaagggg acccccggccgtcctggcagtgctggtatccctggtgaaattggtcgcactggatccaaa ggtgacccaggaggaagaggagatgatggtgtccctggatttagcggtcagagaggagaa cggggtcaacctggtctacctggtggaagtggcttcaagggaaataagggagagccgtac atattggagctagacacaatttcagacatgtgcaggaaaggagagccgggacaaccagga cccgctggggagcagggtttggctggagtgcagggtcctcaaggtccccgtggaccagat ggagtacctggattacgcggaagtaaaggagacagaggaagagatggaaacgatggaata cctggtcaatctggactgcctggacttaaaggagacaaaggtgtacctggctatggtgtt ccaggtctgtctggagagagaggtctgcctggagaaaatggacttccaggagcaaatggc atgaaaggagaaaggggaataccaggagagacgattgacataaatgtggatcttctgaag ggtacgaagggcgaggctggattcccaggcaaccctggaattccggggagagatggctta cctggactgaagggtgacagcggtaattcagggttacctggaatggacggtttgcctgga atgaagggagaacggggctttgatggaatacctggagacgctggcccaagaggacttccg ggggcaagaggtgaaaggggtgcagatggacctccaggacagcctggatttgatggcaga cctggtgaatcaggaccacaaggcttacctggaataaaaggtgagtcaggccttcctgga agagatggactttcaacacgtggtgagaaaggagatgctggactgcctggacttaatgga cctcgtggtcagcctgggttccctggaacagacggacaacctggacaagatggacttcca ggaatgaagggtgatagtggtccatctggacttcccggacttccaggttccgctggacaa aagggagaaccgggacaaattggaccagaaggaacgagaggtttatccggagaggatggt cgacctggcgtaccaggactggttggtgcaaaaggagatgcaggtcttcccggaataaag gggctgtctggctttcccggggagaggggtgaggcaggtgttgcaggccgaccaggtgca ccaggtttagatggaccccagggacccccaggtttacctggagagaggggacgtgatgga gctccaggtaccaaaggagagactggatttgttggaattccaggtgagccaggacgggat ggaaatcccggactgcctggactacaaggaatgaagggtgataggggtttcccaggaatt cccggcgagcaaggtcgaaacggagaaccaggacagaaaggagatcgtggaccaaatggc ttaccaggactgcaaggtgtcccaggtgaggatggtttacctggacctaaaggtgaatcc ggacgacctggatctcccgggaactctggattaccaggacaagatggactccctggactg aatggcatgaagggtgagcagggacttcccggagtgggaatccccggggagtcgggtatc cctggagaaagaggtcgtgatggatcaccaggattaccaggaatgaagggagatcccggg cagcaagggctcccaggattccccggaatgaaaggagagaggggtttccgaggacaaccg ggacagtctggtcgccctggtgatgatggacttcctggcatgaaaggtaatcctggtctg aatggcatccctggaagagccggaataaagggagactctggccttaacggaattccaggt cgtgatggacaaaagggtgaaccgggattaacaggaacaccaggtgaaaggggacaaacc ggtctgaaaggtgaaagaggtctgaacggcttgcctgggacacctggcgtgtctggtttc cctggagccaaaggtgatcgagggcgggatggactgaatggtctccctggagccaaagga gatgctggacttccaggaagagatggattacctggtgagaaaggagaaaatggtttccct ggacctgaaggaagagagggcctgcctggaatgaaaggagaacgaggacctgaaggacca ctaggaggaaaaggcgaaccgggtcgttccataacaggaatcaagggagaaccaggcata ccaggagaacaaggtcgggatggatttccgggaatgaagggggatggtggtttacctgga caaccgggattaccgggaatgaaaggtgatacaggagtgggattccctggtgcaaagggt gaaaggggagtgccaggcttaaatggaatcccaggtgagcagggatcgacaggaatccca ggagagcctgggcagccaggattcccaggcatcaagggaggagttggagacagaggcgtg cctggtcttccaggacttaaaggtctgcctggtccccaaggacccccaggtgaaagaggt acctcaggattacctggaataagtggacagaagggagatcgtggattcccaggacaagat ggattagaaggaaggaaaggagatgaaggacaatccggtctaccaggattgccaggaaat aaaggagataaaggtttcccagggttcaaaggagagccaggaccaggggcaatcatcaga ccagatatgcggatcaagggagaaccgggacagacgggagattctggattccctggaaca cccggattgactggcgagaagggaaatccaggacagaaaggagaacgcggtttctctggc attccaggagagagaggtattcagggattccctgggatgaagggtgaatcgggattccca ggagcaccgggcacccctggagatgatggtttcccaggaccccaaggacctactggagat gcaggattccctggacccccagggcgcaccccaccctcaggcttcctggttgtccgtcac agccagagtgagactgaacctatctgtccagacaacactgcccgtatctggtccggctac agtttactgtacatagaaggcaacgagaggtctcaccatcaggacttgggctgggcagga tcctgtatgcagagattcagtacaatgccattcctcttctgtaacaccaacaatgtatgt aactatgccagtcgtaacgacaaatcctattggctatccacaaatgagccaatgcctatg atgccggtgcgcgatccagaactacgtcgctacatcagtcgctgtgtcgtctgtgatgcc cctgctaatgtcatcgccctccacagtcaggaaatgtccatcccagagtgtccagttgga tggtcaggcctatggattggatacagttttgcaatgcatactggtgcagggcccagtggt ggtggtcagtctctgtccagccctggcagctgtcttgaagacttcagagccacaccattc attgagtgtaatggcagtgggggcacctgccatttctatgccaacaaatatagtttctgg ttaaccaccatcgaccagcgccagaacgattttgccacaccagttcaagaaactctgaaa gctggcaacttgaggacaagagtttcacgatgccaagtgtgtatgaaaaccaccaggcct taa

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