Ostrea edulis (European flat oyster): 125659900
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Entry
125659900 CDS
T09123
Name
(RefSeq) slit homolog 2 protein-like isoform X1
KO
K06839
slit 2
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oed00536
]
125659900
Glycosaminoglycan binding proteins [BR:
oed00536
]
Heparan sulfate / Heparin
Axon guidance molecules
125659900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
LRRNT
LRR_14
EGF_TEN
Laminin_G_2
Laminin_G_1
LRR_1
LRR_9
hEGF
LRR_LRWD1
EGF_CA
EGF_2
Motif
Other DBs
NCBI-GeneID:
125659900
NCBI-ProteinID:
XP_048747652
LinkDB
All DBs
Position
9:complement(24836563..24878540)
Genome browser
AA seq
1472 aa
AA seq
DB search
MKPKLYFKDCLSWNTMFVLVISMLSLSAVMACPNECFCKQKTVDCSYRKLRKIPNGIPLE
TQRLELQGNNITTVRRNDLQNLGNLRVLQLLENKIHAIEQGAFRDLDQMERLRIDRNELA
ELPDNLFASMTKLQRLDLSYNKLKVIGKKTLVGSTVLRNLQLDHNKLECVSETALKPLHN
MEILTLNYNELTSLPKNLFDSMTNLRTLRLIDNKFVCDCHLSWLSKWLKAHPNLGLYTEC
SAPPNLQGIEVDEVQKYSFQCSTGQDTAQQQSDRCSSGASCPKGCSCTNAVVDCRGAGLT
EFPSVFPDDVTEIRLEQNHIVVVPIRAFADLRKLRRINLSNNKITEIAADAFSGLTSLNS
LVLYGNKISDLPPGLFKGLSSLQLLLLNANQIKCIRVDAFQDLASLNLLSLYDNKIQSLA
NGTFAPLKNIKNLHLARNPFICDCNLQWLTEYLHQNPVETSIARCEAPGRMKRKKIATAR
AGKFKCKGSEIHRTKNAGQCVIDVECPKQCVCLGTVVDCSNRHLTLIPDNLPIYTTELKL
QNNQIEKLGANNVFRRLVNLQVIDLSSNRLQEIEEGAFNGAKKLIDVDLSNNRIGKLSGK
SLQGLETVRMMIIEKNRITCLSNTTFNALTELRQLSLYGNEIRCISEGAFDKQGFLSILN
LESNPFNCNCHMGWLSSWLKKSNVVTGVPMCFLPTRHKNVPMLSIKEGEFTCPTDMDVGC
NTGISPCCSETVDIAVGSCDPRAYCPPKCTCTGTVVRCSRQGLKVVPALIPGDTTELYLD
VNNIKHLPPEIGRLTKLQRLDLSNNNLVTLPHHIFSKFTNLATLILSYNQLECMAPTSFS
GLHKLRILSLHGNNISSIPYGTFKDLTSLTHLALGGNQLYCDCNLKWLSDWIKKDYVESG
IASCVGPNSMLNKLLLTTQSSLFVCNGPPDPEVMGKCNACQKDPCLNGATCKSIDFKNFT
CACPAGFHGDKCENEINACFINPCRNGVCEVLDHGRFRCKCNSGFRGDRCEVNIDDCKGH
ACMNNGSCMDLVEGYTCLCAQGYTGKMCQQKILYCRGNHNHCQNGGSCVNLDTDYSCKCP
TGYGGKNCSENLDDCKSHICQNGGRCVDGLGSYTCYCPRGYSGRFCEIAPLTVNNLFSYN
SLCKSHACQNNGVCYVPKGGSHYMCQCAPGFSGKKCEKLTSVSFIADDSYIQMPQIDFKS
MVNITMQMKTKTDSGVIFYIGADQHLAVELFLGRIGISFFTGKSLMSTLYSYIFSYVTVN
DDRLHTVELLIHHRNFTMRVDDGVSRSVVNMGDSKYLDVKDDMYIGGLSANKSSLAHQKF
QIRSQTSFKGCFHGFYINGKQLDFSASKYNHKVMPGCKVDQCANNKCKNGQCKPRKKKGG
YRCKCRRGYSGKFCNLVPTCKQKVFRSRYTHPVTKCMSRTRIKFRRCEGSCGKYCCKPKK
IKTRKVRLYCKDGYSYIHNLAVIRKCGCRKCQ
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaaattatatttcaaggattgcttatcgtggaatacaatgttcgtattagtg
atatcaatgttgtcattatctgccgtaatggcatgtccaaatgaatgtttttgtaaacaa
aagacagtagattgcagttacaggaaattacgaaaaataccaaatggaataccccttgag
acacagcgcctggaattacaggggaataatataaccacggtcagaagaaacgatctacag
aatttaggcaacctgagagttttacaattactagaaaacaagatacacgctattgagcaa
ggagcttttcgggatcttgaccaaatggaaagattgagaatagacagaaacgaactagca
gagcttccagataatttgtttgcatcgatgacaaagcttcaacgattagatctgagctac
aacaaactgaaagttattggaaaaaagacgttggttggatccactgtcctacgcaattta
caactggaccacaacaagttggagtgtgtatcggagacagcgcttaaacctttgcacaac
atggagatcttgaccttgaactacaatgagctgacatctctacccaagaatttatttgac
agcatgaccaatcttcggacattgagactgatagataataagtttgtgtgtgactgtcac
ttgtcatggctatcaaagtggctgaaggcccaccccaatctcggattgtacacagaatgt
tccgccccgcccaatttacaggggatagaggtggacgaagtccagaaatacagcttccag
tgtagtactggtcaggacactgcacagcagcagagtgatagatgttcttctggggcttcc
tgtccaaagggatgcagctgtacaaatgcagtggtagactgtcggggtgcagggctgaca
gagttcccttctgtgtttcctgatgatgttactgaaatccgtttggagcaaaatcacatt
gtcgtggtgcctatccgggccttcgctgatctgaggaagcttcgtagaattaacttgagc
aacaacaaaatcactgagattgctgcagatgccttcagtggtttgacgtcgcttaattct
ctggtgctttatgggaacaagattagtgacttgccccctggcctgtttaagggcctatca
tctcttcagttactattgctaaatgcaaaccagataaagtgtataagagtagatgcattc
caagacctcgctagtctcaatcttttgtctctttatgataacaagatacagtctctggcc
aatgggacatttgctccactgaaaaatatcaagaacttgcacctggcccgtaatccattt
atttgcgactgtaacctgcagtggctgaccgaatatttacaccaaaaccctgtggaaacc
agtattgcaaggtgtgaggcaccgggacggatgaagcgcaagaagatagccactgcaaga
gctgggaagttcaaatgcaaaggttcagaaatccacagaactaagaatgcagggcaatgt
gtgattgatgtagagtgtcccaagcagtgtgtttgtttgggcactgtggtcgattgctca
aatagacatctgacactaataccagacaatcttcccatttacaccacagaactgaaactt
cagaacaatcaaattgagaagcttggggcaaacaacgtgttcagaagactcgttaattta
caagtcatagatttgagcagtaatcgtctccaggagatagaagaaggtgcatttaatggg
gcaaagaagctgatagatgtagatttgtccaataatagaattggaaagctttcggggaaa
tctctgcagggactggaaaccgtcagaatgatgattattgagaaaaaccgaattacctgc
ctgagcaacacaacatttaacgctctgacggagcttcggcagctgtctctgtatgggaat
gaaataagatgcatatctgagggagcttttgataaacaaggatttctgtcaattttaaat
ctggagtccaatccttttaattgtaattgtcacatgggatggctgagtagctggttaaag
aagagtaatgttgttactggtgtacccatgtgtttccttcctacccgacataagaatgtt
cctatgctgtcaattaaagagggggagttcacttgcccaactgatatggatgttggatgt
aacactggaatttccccctgctgttccgaaactgtagatattgcagtgggaagttgtgac
ccccgagcatactgtcccccaaagtgcacctgtaccgggactgttgttaggtgtagtaga
cagggactcaaagtagtccctgcacttattccaggggacaccactgaactgtatttggat
gtaaataacattaagcatctccctcctgaaattggtcgacttacaaagctgcaaagatta
gatctcagcaataacaacttggtgacactaccacatcacatattctccaagttcactaat
ttagccacactaattttaagctataatcagttggaatgcatggcacctacaagcttttct
ggtcttcataaactcagaattttatctttacatggaaataatatatcatctataccatat
ggaacattcaaagacctcacatcattgacccatttggccctgggaggcaatcaattatac
tgtgattgtaacctgaagtggctgtcggattggatcaagaaggactatgtagagtctggc
atagcctcttgtgtgggtcctaactccatgctcaacaaacttctcctcaccacccagtcc
tcgctgtttgtttgtaatgggccacctgaccctgaggtaatgggaaaatgtaatgcttgt
caaaaagacccctgtcttaatggtgccacctgtaagagtattgacttcaaaaacttcacc
tgtgcatgtccagctggattccatggggacaaatgcgaaaatgaaatcaatgcctgcttt
attaatccgtgtcgtaatggagtttgtgaagtattggatcatgggagatttagatgtaaa
tgtaacagcggatttcgtggtgaccgatgtgaagtaaacattgatgactgtaaaggtcat
gcctgtatgaataatggttcctgcatggacttggtggagggctatacctgcttatgtgct
cagggatacacaggcaagatgtgtcaacaaaaaattctatattgccgaggaaatcacaac
cactgtcaaaatggaggctcgtgtgtgaatttggacacagattacagttgcaagtgtcct
acagggtatggagggaagaattgctcggagaacctcgacgattgtaagtcccacatatgt
cagaatggtgggcgttgtgtggatggcctgggatcatatacctgctactgtccgagggga
tactccggacgcttctgtgaaatagcccctctcactgttaacaatctattctcttataac
agtctctgcaaatctcatgcctgtcaaaataatggggtgtgctatgtacccaaaggtggt
tctcactacatgtgccagtgtgctccaggtttttcgggaaagaagtgtgaaaaactgacc
agcgtttcttttattgctgatgattcctatattcagatgccacaaattgatttcaaatcc
atggttaacatcaccatgcaaatgaagacaaagaccgactcgggtgtgatattctacatt
ggggctgatcagcatctggctgtggaactattcctgggtagaattggaattagtttcttt
acaggaaaatctctgatgtccacactgtacagctatattttcagttacgtaactgtaaat
gacgatcgtcttcatactgtggagctccttattcatcaccgtaacttcaccatgcgtgta
gatgatggtgtgtcgagatctgtggtgaacatgggagatagtaaatatctagatgtaaag
gatgatatgtatatcgggggactgtcagctaacaaaagctcactagctcatcaaaaattc
caaattagaagtcagaccagcttcaaggggtgctttcatggtttctatataaatggaaaa
caattggattttagtgcctctaaatataaccataaagtaatgccagggtgtaaggtcgat
caatgtgcaaataacaagtgtaaaaatggacagtgcaagccacggaaaaagaagggaggc
tatcgatgcaaatgtcgacgaggatattctgggaaattctgtaacttagttccaacatgt
aagcagaaagtattccgtagcagatatacacaccctgtaacaaagtgtatgtctcgaaca
cggataaaattcagacgatgtgaagggtcgtgtggaaagtactgttgtaaaccaaagaaa
attaaaacacgtaaagttagactatattgtaaagacggatattcatacattcataatctt
gcagtaatccgaaaatgtggctgtagaaaatgtcagtaa
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integrated database retrieval system
