Ostrea edulis (European flat oyster): 125660358
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Entry
125660358 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125660358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125660358
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125660358
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125660358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_Vps41
ZNF512_C2HC
zf-RING_11
zf-ANAPC11
zf-UDP
zf-RING_5
GHMP_kinases_N
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125660358
NCBI-ProteinID:
XP_048748123
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All DBs
Position
1:complement(15358789..15372874)
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AA seq
639 aa
AA seq
DB search
MTSSGNSVVVWEWMNEYGRWRPYDPHTANFIESSHRKSPSVQVSLGKVAPNMGMYSVDFL
TMCQIRFGTGTARPVRRQLYPDSSPPGKGIIWQWEGDIQGQWNSFDMEVSCLLEDHFSNP
ATQNTELNLSQTTVKLPYIMNLSNMTQKRIETGRLRTIRRELLSMPYLNSIPSDGTSSSS
GATNGQGIDTSAVNGPSGAKRQRLSGNGQLSSNPSICGGTTGPITRKRLYTHMMAQNSPL
PTSVHMNSSSQIPTNQISHPMPQSLQVTNQNGQIMPVQNPHSLTNQTQLPSGISSSGFVP
HSSMFQRAMNFIHGNIPHGMGLAGGSSNNVTYHSLPSQPVGGSKIRPRMASTAANLLMSA
ANSLVPQSNTSPGLQPSTSTGAARGTTGFYLPPEDKIPNNVSRQTAHSSGKWAGCEVFEK
YVSILDSPPNDEDCCICCEKLTHPSGYGEGKTDEKVVFKLCKCGHMFHKLCILAMYESST
KNGAVQCPTCKTIYGEKHGNCPDGVMEYLTLPQSLPGNEDHQTKIVIYHISPGIQGPEHP
HPGKRYTCRGFPRVCYIPDSDKGRKVLKLLIIAWRRRLTFTIGQSSTTGESDTVTWNEIH
HKTESGRNHSGHGYPDNKYLDNVLMELNVHGVTEADLLS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctcgggaaactctgtggtggtttgggagtggatgaacgaatacggtcgatgg
cgcccttacgatccacacacagccaattttatagaatctagccacaggaaaagtccgtca
gtgcaagtcagtttgggaaaagtcgccccaaacatgggaatgtactccgtggatttcctt
actatgtgccaaattcgatttgggacagggacagctagaccagttcgccgccaactgtac
ccagattccagtcccccaggtaagggcattatatggcaatgggagggagacattcagggc
cagtggaattcatttgatatggaagtatcatgtcttcttgaggaccacttttccaatcct
gccactcaaaacacagaactgaatctctcccagacaactgtgaaactcccatatatcatg
aacttgagtaacatgactcagaaacgtattgagacaggacggctacgaacgatcaggcgt
gaactcctgtccatgccttatttgaattctattccctcagatggaacttcatcaagctca
ggggcaacaaatggacagggtatagataccagtgctgtgaatgggcccagtggggctaaa
cgacagagattatcaggaaatggacagttgtcttctaatccttcaatatgtggtggaaca
acaggaccaataaccaggaaacggctgtacacacacatgatggctcaaaattccccttta
cctacctctgttcacatgaactcttcatctcagattcccaccaatcagatctctcatcca
atgcctcagtcactgcaagtaaccaatcagaatggccagatcatgcctgttcagaatccc
cactccttgactaatcaaacacaacttccctctggtatatcatcctctggctttgttcca
cattctagcatgttccagagagctatgaactttattcatggaaatatcccacatggaatg
ggactggcagggggtagctccaacaatgttacctatcacagtttacccagtcaaccagta
ggtggatctaagatccgacctaggatggcaagtacagctgccaatctgctgatgtctgct
gcgaattctctagtcccccagtctaacacttcacctggtctccagccctcaacatccact
ggtgcagcaaggggaaccactggtttctatctaccaccagaagacaaaattcctaataat
gtgtctaggcagacagcccattcctctggtaaatgggctggatgtgaagtgtttgagaag
tatgtgtctattttggacagtcctccaaatgatgaggactgttgtatttgctgtgaaaaa
cttactcatccctctggttacggtgaagggaagactgacgagaaggttgtgtttaaactc
tgtaaatgtggccacatgtttcacaagctttgtattctggccatgtatgagagctctaca
aagaatggtgctgtccaatgtcctacgtgtaaaaccatctatggagaaaagcacgggaac
tgccccgacggtgtgatggagtatttaacgctaccgcagtcattaccaggcaacgaggat
catcagacaaagattgtcatctatcacatctccccggggattcagggtccagagcaccct
caccctgggaagcgctacacgtgtcggggattccctcgagtgtgttacattccggacagc
gacaaaggcagaaaggtgctaaaactgttgattattgcatggaggcgacgcttgacattt
acaattggtcaatccagtaccacaggagaatccgacacagtcacatggaatgaaattcac
cataaaaccgagtccgggcggaatcactctggtcatggttaccccgacaacaagtaccta
gataatgtgttgatggaactcaacgtacatggagtcacagaggcagatctattgtcatag
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