Ostrea edulis (European flat oyster): 125660417
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Entry
125660417 CDS
T09123
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03030
DNA replication
oed03410
Base excision repair
oed03420
Nucleotide excision repair
oed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125660417
03410 Base excision repair
125660417
03420 Nucleotide excision repair
125660417
03430 Mismatch repair
125660417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oed03032
]
125660417
03036 Chromosome and associated proteins [BR:
oed03036
]
125660417
03400 DNA repair and recombination proteins [BR:
oed03400
]
125660417
DNA replication proteins [BR:
oed03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125660417
DNA Replication Termination Factors
ELG1-RFC complex
125660417
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125660417
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125660417
Check point factors
HRAD17(Rad24)-RFC complex
125660417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_30
Rad17
AAA_24
AAA_assoc_2
AAA_19
AAA_16
AAA_11
DNAX_ATPase_lid
DUF815
Gp44_lid
Mg_chelatase
ResIII
SLFN-g3_helicase
RuvB_N
ATPase_2
AAA_7
Cdc6_lid
AAA_5
Motif
Other DBs
NCBI-GeneID:
125660417
NCBI-ProteinID:
XP_048748199
LinkDB
All DBs
Position
9:60442097..60465138
Genome browser
AA seq
381 aa
AA seq
DB search
METKKPLYFLCTIWREFIGTISIMHPFFKPREAGTTSRDPKVSEIPGKGGKGKQKHVPWV
EKYRPRSVDDVAYQDEVVAVLKKSLEGSDLPNLLFYGPPGTGKTSTILAASRSLFGTDMM
KLRVLELNASDERGINVVREKVKKFAQTTASGTRPDGKPCPPFKIIILDEADSMTAPAQA
ALRRTMEKESKTTRFCLICNYVSRIIEPIASRCAKFRFKPLADRVLSERLQKICDTEEIT
CDKESIQALMDTSEGDMRKAITYLQSAGRLKGEEGVTKADVYEIAGVIDNDTIDQLIQVC
RSNSYEKLEKIVQEVMYEGHSAAQIINQLHDKVIQLDDLNDQQKSVIFEKLAVVDKCLMD
GADEYLQLMALFTTMMREICR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaagaaacccctatacttcctgtgtacgatctggcgggaatttattggcaca
atttcgattatgcatccatttttcaaaccacgagaggcaggaactacgtcccgagaccca
aaagtatcggagatcccaggcaaaggaggaaagggaaagcagaaacacgtcccatgggtc
gagaaataccgtccacgctcagttgatgatgtagcttatcaagacgaggttgtcgctgta
ttgaagaaatctcttgaaggatcagatctgcccaatctgttgttctatggccccccagga
acgggaaagacctccaccatcctagcagcttccagatctctgtttggaactgatatgatg
aaattgcgagtgctggaactgaatgcatctgacgaacgaggaattaatgtcgtcagagag
aaagtgaagaaatttgcccagaccacagccagtggaacgcgaccagatgggaagccatgt
cctccttttaaaattatcattcttgatgaggcagactccatgacagcccctgcacaggca
gccctgcgaagaacgatggagaaagagagcaagacgacgcgtttctgcctgatctgtaac
tatgtcagtcggatcattgaacccattgcttcccgctgtgccaaatttcgcttcaaaccc
cttgcagacagggtgctcagcgaaagactacagaagatttgtgacactgaagaaattact
tgtgacaaagagtctattcaggccctgatggatacttcagagggtgacatgaggaaagct
atcacatatctccagagtgctggcaggctgaagggggaggaaggggtgacgaaagccgat
gtctacgaaatagcaggggtgatagacaatgacacaattgatcagttaatccaagtctgt
cgctcgaactcgtacgagaaactggaaaagattgtccaggaggtgatgtatgagggtcat
tctgccgcccagatcatcaatcagcttcatgacaaggtcatacaactggatgacctcaat
gaccaacagaagtcggtcatctttgaaaagttagcagtcgttgacaaatgtctgatggac
ggcgccgatgagtatctacaattaatggctctgtttaccaccatgatgagagagatttgt
cgatga
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integrated database retrieval system
