Ostrea edulis (European flat oyster): 125660418
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Entry
125660418 CDS
T09123
Name
(RefSeq) general transcription factor IIF subunit 2-like isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125660418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125660418
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125660418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
125660418
NCBI-ProteinID:
XP_048748200
LinkDB
All DBs
Position
9:complement(60400709..60442175)
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AA seq
266 aa
AA seq
DB search
MSVPEKAQETRNVDVAAAGRGVWLVKIPKYLQEKWEKNKAGKTEVGKMRITRSRFPGQKP
KVTFTIDEELAKGSPGDMPIPREHNMILTGLGNQNLVVFSQTPVTVKQESSSGSVDVVTS
DRVSVEGKVVQRADCQPDRNRSYLNLKRMQLEAKNKPQREVIQITKVVPMYKPVKDHVHN
APSTDKNKVEKRLREDKEKVMDILFNAFEKHQYYNVKDLVSITKQPITYLKEILKEICTY
NMKAPHRNMWELKPEYRHYKEQQASG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaccagagaaagcacaagagactcgaaatgttgatgtggcggcggcaggacga
ggcgtgtggcttgtcaagattccaaagtatttacaggaaaaatgggaaaagaataaagca
gggaaaactgaagtgggaaaaatgagaatcacacgttccagatttcctggtcagaaacca
aaggtgaccttcacaattgatgaggaattagcaaaaggctctccaggagacatgcccatc
ccacgagagcacaacatgattctgacagggctgggcaaccaaaacttagttgtcttctct
cagacaccagtcacagttaaacaagaatctagctcagggtcagttgatgtggtcacttca
gacagggtctcggtggaggggaaggtcgtacagcgagctgactgccagccggaccggaac
cgcagttatctgaatctcaaacgaatgcagctagaggccaaaaacaaaccgcagcgagaa
gtcattcagattacaaaggtggttccaatgtataaacctgtcaaagaccatgtacacaat
gcaccctcaacagacaaaaataaagttgaaaagaggctgagggaggataaagagaaagtc
atggacattttgtttaatgcatttgagaaacatcagtattacaatgtcaaggaccttgtc
tccattaccaaacagccaataacttacttaaaggaaattctcaaggagatctgcacatac
aacatgaaggcaccacatcgcaacatgtgggagttaaaaccagagtatcggcactataaa
gaacaacaggcatcgggatga
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