Ostrea edulis (European flat oyster): 125661142
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Entry
125661142 CDS
T09123
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125661142
04121 Ubiquitin system [BR:
oed04121
]
125661142
Transcription factors [BR:
oed03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125661142
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125661142
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
DUF659
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
125661142
NCBI-ProteinID:
XP_048748978
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Position
9:59981637..59985793
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AA seq
616 aa
AA seq
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MLYAGHIPFPPIRQTPSKMEVADTDFEIVPNKRAKSSIWKQFGLKKRKSDGRIEESVAIC
KLCDSVIKCAGGGTSNLTAHLRRHHPLQVTSTATATSEKSNAASHGFQPQSLTVAGMFAN
RQLYKSSSPKAVDITQKIAKFLVKDLRPYRMVDSPEFRDIINALDPRYQVPSRKQFSEAI
IPKMYNAVKENVLKTLSSATQVAITSDGWTSRSTESYVTVTATFVDANWEMQNYVLQTRP
MPESHTAENVASVIREACKEWKLPSPLGPPPLVSDNAANMLKAGQIIGCIHIGCLAHTLN
LAAQRSLKVKTVSNLLARIRTIVAFFHRSTVAASVLKAKAELLAIPNHKLKIDVCTRWNS
TFDMIERFLEMQAAVIASLRCKELSHIKNKDISNLSDESVSLAENIAACLKPLKDMTTML
CTESTPTLSVIMPLHRQLITNILVAKEDDSHTVVEMKKLMKNDLESRYADKKDFLNMVSA
IDPRFKSLPYLTDEEKTDVFDHVTQEAVRLAGAKLKPFVVKTEKDESTSTIVQPNLPLLP
ALPGDSEIQIKNETVVETSSKTGTFADSSCVLHDILGDVFVTLVEPPKSSLELVQMEVIN
YKSEPSIPLKANPLNW
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctttatgcgggtcatataccgttcccgccaattaggcaaaccccgagtaaaatggaa
gtagcagacacggattttgagatcgtaccaaataaaagagcaaaatcctcaatttggaaa
cagtttggtctgaagaaaaggaagtcagatggaaggattgaggaaagtgttgcgatttgt
aaactatgtgactctgtgatcaagtgtgcgggaggtggcacttctaatcttacagcccat
ttacgccgtcaccatccactacaagttacaagtactgctacagctacctctgaaaaaagt
aacgccgcgtcccatggttttcagccacaatctctgactgtagctgggatgttcgctaat
agacagctttataaatcttcatcacccaaagcagtggacattacgcaaaaaattgctaaa
tttttggtcaaggaccttagaccttacagaatggttgacagcccagagtttagagatatt
atcaatgcattggacccgagataccaagttccatctcgaaaacaatttagtgaggccatc
atccctaaaatgtacaacgcagtgaaggaaaatgtactaaaaaccttgtcatcagcaaca
caggtggcaatcactagtgatggatggacctcgaggtcaaccgagtcatatgtcactgtc
acggcaacctttgttgatgcaaattgggagatgcagaattatgttcttcaaaccaggccc
atgccagaaagtcatacagctgaaaatgtggcatctgtcatcagggaggcctgtaaagaa
tggaaacttccaagtcctcttggtcctccgccactggtgtctgacaatgcagcaaatatg
ttaaaagcagggcagataattgggtgcattcacataggatgtttagctcacactctgaat
ttagcagcacaacgttccctgaaagtgaaaactgtctctaatctgttggcccgtatcaga
accattgttgcattttttcatcgcagcactgtggcagcatcagttttaaaagccaaggca
gaactgttggctatcccaaaccacaaactcaaaattgatgtgtgtaccagatggaattct
acctttgatatgattgagagatttctagaaatgcaggctgctgtcatagcttcacttaga
tgcaaggaattatcacatattaagaacaaggatataagcaacctaagtgatgagagtgtc
tctctggcagaaaacattgcagcttgtttgaaacccttaaaggacatgaccactatgctc
tgcactgaatccactccaactctttctgtgattatgccacttcatcgacagctcatcacc
aacattctagtcgcaaaagaggatgattcccacacagttgtggagatgaagaagcttatg
aaaaatgatttggaatcaaggtatgcagacaagaaagactttctcaacatggtgtcagcc
attgatcctcgttttaaatctttaccatatctcactgatgaagaaaagacagatgtgttt
gaccatgtcacgcaggaagcagtacgtctagcaggagccaaattgaaaccatttgttgtg
aaaacagaaaaagatgaaagcacatctacgattgttcagcctaacttgcccttattgcct
gcgcttcctggtgattcagaaattcagattaaaaatgaaacagttgttgaaaccagcagc
aagacaggaacatttgcagattcctcctgtgtcttgcatgacattttgggtgatgtattt
gttactttagtagagccaccaaaatcatcccttgagttagtacagatggaagtcatcaat
tataagagtgagccatcaattccactaaaggccaatcctttaaactggtga
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