Ostrea edulis (European flat oyster): 125661384
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Entry
125661384 CDS
T09123
Name
(RefSeq) LOW QUALITY PROTEIN: Y-box factor homolog
KO
K09276
Y-box-binding protein 1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125661384
03019 Messenger RNA biogenesis [BR:
oed03019
]
125661384
03041 Spliceosome [BR:
oed03041
]
125661384
Transcription factors [BR:
oed03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
125661384
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125661384
mRNA cycle factors
Common to processing body (P body) and stress granule
125661384
Spliceosome [BR:
oed03041
]
Common components
Common spliceosomal components
General mRNP proteins
125661384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Motif
Other DBs
NCBI-GeneID:
125661384
NCBI-ProteinID:
XP_048749326
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All DBs
Position
1:13592128..13604277
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AA seq
276 aa
AA seq
DB search
MSDSENQXEKEAEVEKKIIAKKITGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIIKNNP
KKYLRSVGDGEAVEFDVVEGEKGNEAANVTGPDGGHVQGSKYAADRRRFRRYYPRRRGGG
PGHPRQDGDELDDGEGDDQDRRPPSRRPYYRGGGGGGGGGGRGFYRGFYQGGGPRRPPRY
QNAIMDGPGRQPQFRRPYWRRGYRRYYAQNEGYEGPPQYGYRGGRGRGRGRGRGRGRGGR
GYYRRRDEGEYGRENDGGESPEPTQESNEEKTEQQD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccgagaaccaancggagaaagaggccgaggttgagaagaagatcatagca
aagaaaattacaggaactgtaaaatggtttaacgtgaaaagcggatatggcttcataaat
agggatgacacaaaggaagatgtttttgtccatcagactgcgatcatcaagaacaatccc
aaaaagtacttgaggagtgttggtgacggagaagccgtggaatttgacgttgtagaaggc
gagaagggaaacgaagctgccaacgtaaccggaccagatggcgggcacgtacaaggcagt
aaatacgctgctgatcgcaggcgtttccgtcgttactacccacgaagacgtggaggcgga
ccaggccatccaagacaagacggtgatgaactagatgatggagaaggagatgatcaagac
cggaggccgccctcccgccgtccctactacagagggggaggaggaggaggtggtggtggt
ggaagaggtttctacaggggcttctaccaaggtggtggaccccgcagaccccctcgttac
cagaacgctattatggatggtccaggacgccagcctcagttccgaaggccatactggagg
aggggataccgaagatactatgcccagaatgaggggtatgaaggccctccacagtatggt
taccgtggtggaaggggtcgaggccgaggtcggggcagaggtcgtggacgtggtggtaga
ggatactacagaagaagggatgagggcgagtacggcagagaaaacgacggcggtgaatct
cctgaaccgacacaggaatcgaacgaagagaaaaccgagcaacaggattag
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