Ostrea edulis (European flat oyster): 125661555
Help
Entry
125661555 CDS
T09123
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125661555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125661555
Membrane trafficking [BR:
oed04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125661555
Protein recycling
Other Rab GTPase associated proteins
125661555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
AAA_15
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
125661555
NCBI-ProteinID:
XP_048749563
LinkDB
All DBs
Position
1:complement(13489381..13507369)
Genome browser
AA seq
512 aa
AA seq
DB search
MSVNKKSAKKTFHVDESDLLCKNGCGFYGNPAWQGFCSKCYREVYQAAKQAQAQHDEQKT
RPSEEAEETTSTPLFSKFTEKKSVQFNKRSHTVKSIFRKTPTKDSMVHETNSARKEIKRV
SLETQQLGTEFADYLKSIRKNVAVDVTKNTKLIVDKLTQNTEAPVDDLSEMIQDFYQNMS
DRMNMNSTYKGQSPEMTEKLLDYIEKYVMVRVYSMVFSQNIEDEENDLKTQNLIRSLHWV
TAQQLDTPINDNEEDVRQLVDKAITEIIDMNSKKSPPDKLDCVTRCCKNIFEMLSLSKAG
PANADDFLPALIFVVLKANPPLLQSNIQYITRFANPRRLMSGEAGYYFTNLCCAVTFIES
INAESLNLTQQEYDRYMSGEAIPPQNGQDNTCEGLHTMWHNLRTLSDLRQRQERVMADTL
QLQQDMKEFQASFKQDVQSVLEKNPCSIRPRKMKIDIDADTENVANLPTPLLPEPIMPTN
SVSVVGQGTSQREQSPSADSVAGEVVPMDLLR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttaacaaaaagtctgccaagaagaccttccatgtagacgagtctgacctgctg
tgtaagaacggttgtggtttctatggtaacccagcatggcagggcttttgctccaaatgt
tacagagaagtctatcaggcagccaagcaggctcaagctcaacatgatgagcagaaaacc
aggccatcagaagaagctgaggagaccactagtactccactgttctccaagtttacagag
aaaaagtctgtacagtttaacaagcgatctcacacagtcaaatccatcttcaggaagaca
cccacgaaagattctatggtccatgagaccaatagcgcacgtaaagaaataaagcgagtg
agtttggaaacccagcaactgggaacagaatttgcagattatctgaagtccatccgtaaa
aatgtggccgtagatgtgaccaagaacaccaagctgattgtggacaaactgacccagaac
acggaggcaccagtggatgacctgtccgaaatgatccaggacttttaccagaacatgtcc
gacaggatgaacatgaacagtacatacaaaggtcagagtcctgagatgacagagaaactg
ctggactatatagagaaatacgtgatggtgcgtgtttactccatggtgttctctcagaat
atcgaggatgaagaaaatgacttgaagactcagaacctgatccgaagtctacactgggtg
actgctcagcagcttgacacgcccatcaatgataatgaggaagacgtccgacaactcgtg
gacaaggccattacagaaataattgatatgaattcaaagaaatcgcccccagacaagttg
gattgtgtcactcgttgctgcaagaacatcttcgaaatgttaagcctttccaaagcgggt
ccagctaacgcggatgacttccttcccgcactgatcttcgtcgtcctgaaggccaatcct
ccattactccagtccaacatacagtacatcacaaggtttgcgaatcccagaagactgatg
agcggggaagcaggctactacttcactaacttgtgctgtgctgtgaccttcattgagagc
atcaacgctgaatcactgaatctaacacaacaggaatatgacaggtacatgtcgggggag
gcgatccctccccagaacggacaggacaatacatgtgaaggtctccacactatgtggcat
aacctgcggactctctccgatctccgacagcgacaagagagagtcatggcagacacactc
caactccaacaagatatgaaagaatttcaagctagttttaagcaggatgtgcagagtgta
ctggagaaaaatccttgttcaatccgacctcggaaaatgaaaattgacattgatgctgac
acagaaaatgtcgcaaatcttccaacaccactacttcctgaaccaataatgccaacaaat
tctgtgtcagtggttgggcagggaaccagccaaagagaacagagcccctcagcagattcc
gtagcaggagaggtggttccaatggacttgctccgttaa
DBGET
integrated database retrieval system
