Ostrea edulis (European flat oyster): 125662016
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Entry
125662016 CDS
T09123
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04137
Mitophagy - animal
oed04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125662016
04137 Mitophagy - animal
125662016
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oed01002
]
125662016
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125662016
04121 Ubiquitin system [BR:
oed04121
]
125662016
Enzymes [BR:
oed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125662016
Peptidases and inhibitors [BR:
oed01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125662016
Membrane trafficking [BR:
oed04131
]
Endosome - Lysosome transport
Others
Others
125662016
Ubiquitin system [BR:
oed04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125662016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
125662016
NCBI-ProteinID:
XP_048750143
LinkDB
All DBs
Position
8:complement(20075788..20109704)
Genome browser
AA seq
1165 aa
AA seq
DB search
MPVKKKDLYVAKSLKALNDLAALPAKMTNNPKILLKSAEKIHKEAELHESLGDEEKAYIM
CMKYFNVVTLIRKSAEYKKHKDYFDSLIGQKNLLKSINKAEELSANLKDRYELAEAEEVA
SKLSPLEDNPHPKEEPVRTEEEVKKPIETENTDKPVEPAPQADGRITPVELYRLLNDKET
NLIIMDVRPASQYGESHIKHDACISVPAEVIKPGTTVTYIEMALSEEAKGQWRKRGQTDH
IILLDWNSTLSQVTIATPLRTLKDALFKYDSTVIIKSEPLVLEGGYDQWLMYYPQVTTNA
NVTNPTQEGPMSSAPSLDFDYPDFDEDFSLTPKPKPKPEVEASSDPLGLLNNVPDTAKPP
IPTSGGQARPSVDRSTKPKPSPSNNSLNSIHNVFPTSQTDSKTISVPKNNLMAEAQRKEK
RAAEEVVRSKEEEMRIQTEKDKEAEEQEAKRQKLQREIQELERLKMEQARDVADLMRKKK
AIVEENQGDSRTDSHKKGEEERRKELAILDLEEKEKRQVQEEMEREKQRRLEEVERLRQE
RKRREEGEADRKALEKARENAKLEEERRKLDLKKAEDEAQRLLEEEQRRAAQQKAEADKL
EAQRKAEADKLAAQQKVEADRLETQKKKEEEEQRETERRRQQEEEQRKEEKKRQEQMKKV
EEERLEKEKADLARKEAEEKLRRLNFAESQPSKPKTIPSPNLPSGWEKRLDLNTRRYYYI
NHNKGSTQWESPYTQTSQPPGQLSVTKLKDEPTTPKRGLTRSNSSPNIAKMMFDEEQAPK
TLPTVNRAMKPQPRVDHPQPKPRKALHRDLNPVYGNVGRALTGLRNLGNTCYMNSTIQCL
NNTSPLATYFLTDMYLYDINRESQLGYYGEVADDFSVIIKALWSGQYKCITPRDFKFIVG
KHNPEFAGTTQQDSHDFLTFLMDGLHEGLNKVKKRPEIPEQENDNLPDNQAAEIAWRHHQ
LCNESIIVELFQGQLKSTLMCLHCRKMSVNFQAFMFLTLPLPSSSRCSLGDCLKLFLKEE
KLTGSSRWRCPRCKVDRDAVKKIDIWRLPRILLIGLNRFVYKGQWREKINSHVDFPARNL
DLNPYLDGPKSTKTVYKLYATSNHTGTLDGGHYTAYCRSPCTQNWYKYDDDHVSEISESS
VRSSSAYVLYYTSVELTPPNFRQHF
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaagaagaaagacttgtacgtggcaaaatctttaaaggccctgaatgacctt
gctgctctgccagccaaaatgacaaataatccgaaaatactactgaagtcggctgagaag
atacataaagaagcggaactgcacgagtccctgggagatgaggagaaggcatacattatg
tgcatgaagtactttaatgtggtcactttaatcagaaagtctgccgaatacaaaaaacat
aaggactattttgacagtttgattggacagaagaatttactaaaatctattaacaaagct
gaggaactgtctgcaaacctgaaggacagatatgagttggctgaggctgaggaagtagcc
agcaagttatctccccttgaagataatcctcatccaaaggaagaacctgtcagaacggaa
gaggaagttaaaaaaccaattgaaacagaaaacaccgacaaaccagtggagcctgcccca
caggctgacggcagaataaccccggtggaactgtaccgtttgttaaatgacaaggagact
aatttgattattatggacgtacggccagcttcacagtatggagaatcacacatcaaacac
gatgcctgtatcagcgtgccagcggaagtcatcaaaccaggaacgaccgtgacctacata
gaaatggcactgtcagaagaggccaaaggtcagtggaggaaaagaggtcaaactgaccac
attatcttactggactggaactccaccctgagtcaggtcaccatagcaacaccactgcga
acactcaaggatgccttgtttaaatatgattctacagtgataataaagagtgagccgtta
gtcctggaggggggatacgaccagtggctgatgtactacccccaagtcaccaccaacgcc
aacgtgaccaaccccacacaggagggacccatgtcatcagccccatcattggattttgat
taccctgactttgatgaagatttctctcttactcctaaacccaaaccaaagcctgaagta
gaggcttcgtcagacccactgggtctgctcaacaatgtgcctgacactgctaaacctcca
ataccgacgtcagggggccaggccagacccagcgtggacaggtccaccaaacccaaaccc
tccccctcaaacaacagcctgaattctatacacaatgtcttccccacctcccagactgac
agtaagacaatatcagtgcctaagaataacttgatggctgaggcacaaaggaaggagaag
agggcagctgaggaggtggtgaggagtaaggaggaggagatgaggatccagacagagaaa
gataaggaagctgaggagcaggaggcaaaaagacagaagttacagagggagatacaggag
ctggagcggttaaaaatggagcaggctagagatgtggccgatttgatgagaaagaaaaag
gccattgtagaggaaaatcagggagattcgaggacagactctcacaagaagggagaggag
gaaaggagaaaggagctagccatacttgacctcgaggagaaggagaagaggcaggtacag
gaggagatggagcgagagaagcagcgaagactggaggaagtggagaggctgaggcaggag
aggaagagaagggaagagggcgaggcagacaggaaggctttagaaaaggctagagaaaat
gccaaactagaagaagagaggcgtaaattggatcttaaaaaagctgaagatgaggcacag
agactactcgaggaagagcagagacgagcggcacaacaaaaagctgaggcagacaaactt
gaggcacagagaaaggctgaggcagataaacttgcagcacagcaaaaagttgaagctgac
agacttgagacacagaaaaagaaagaggaggaagagcaaagggagacagagaggagaagg
caacaggaggaggagcaaaggaaagaggagaagaagaggcaagagcaaatgaagaaagtg
gaggaggaaagactggagaaggagaaagcagacctagctaggaaagaggcagaggagaaa
cttcgcaggcttaattttgctgagtcacaaccctcaaaaccaaaaaccatcccctccccc
aacttgcccagtgggtgggagaagaggctggacctgaacacgaggaggtactactatatc
aaccacaacaagggaagcacacagtgggagtcgccttatacccagacaagccagcctcca
ggacagctgtctgtcaccaagcttaaagatgaaccaaccactccaaagcgaggcttgaca
cgctccaattcttctcctaacattgccaagatgatgtttgatgaagagcaggcacccaaa
acacttcctaccgtaaacagggccatgaaacctcaaccaagagttgaccatcctcagcca
aagcctagaaaagcccttcacagagacttaaacccggtgtatggaaatgtgggtcgagct
ctgacaggtctacgtaaccttggcaacacgtgttacatgaattccaccattcagtgtcta
aacaacacgtcgccactagcaacatatttcctgacggacatgtatctatacgacattaac
agagagagtcagcttggttactatggtgaggtagcagatgacttctctgtcatcattaag
gccctgtggtccggacagtacaagtgtatcacccctagagatttcaagtttatagtgggt
aaacacaacccagagtttgcaggaaccactcaacaggacagccacgactttctgacattc
ctgatggacggacttcacgagggcctgaacaaggtgaagaaacgccccgagatccctgag
caggagaatgataatttaccggataaccaggctgcagagatagcctggagacatcaccag
ctgtgtaatgagtccataattgtggagctgttccagggccagttgaagtctactttgatg
tgtctacactgtaggaagatgtctgttaacttccaggctttcatgtttcttaccttgccc
ctcccttcctcctcccggtgtagtcttggggattgcctgaagttgtttctaaaagaggag
aaattaacaggaagcagtagatggcgctgtcctcgatgtaaagttgaccgtgatgccgtc
aaaaaaattgatatctggagacttcccagaattctactcatagggctcaacaggtttgtg
tataagggccaatggagagaaaagatcaacagccatgttgatttccctgctaggaacctg
gacctgaacccgtatctagatggacctaagtctacaaagaccgtctacaaactctacgct
acctcaaatcacactgggactttggatggagggcattatacagcatattgtcgtagcccg
tgcacacagaactggtacaagtatgacgatgaccatgtgtcggagatttcagagtcaagt
gtgcggtcgtcgtcagcctatgttctgtactatacatcagtggaactgacaccacccaac
ttcaggcaacatttctga
DBGET
integrated database retrieval system
