Ostrea edulis (European flat oyster): 125663605
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Entry
125663605 CDS
T09123
Name
(RefSeq) F-box/LRR-repeat protein 20-like
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125663605
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125663605
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
LRR_At1g61320_AtMIF1
F-box-like
LRR_RPS2
LRR_At5g56370
F-box
F-box_5
DUF5834
LRR_14
PyocinActivator
Motif
Other DBs
NCBI-GeneID:
125663605
NCBI-ProteinID:
XP_048751842
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Position
1:19661767..19668938
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AA seq
629 aa
AA seq
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MAARIPQEVITHIMRFLNVSDRKEAALVNKLWYEASLDPILQRDVVLHFNGDTNYVPLST
VSHRRLSHLTLSQLDNSMNTKHVLLKSCKQISDSLKSLSFKSCNITESTFVEILSYCINL
TSIDLTNCNSIFLSGKLLERNTDLQILRESLKKVKDLNLSSIRQLSDVTFNRIVTICPNV
ERIWLVGSNIVFNSDHYIPRGKSKVASSAVLTFQNILDFVRVQAAVLTTLDLSRNQINDE
ALESLVTIPDLHLQEVHLLACKDIEDEGLIALSHNQKSLKVLNIKECMGVTDSSVSAVAA
NLVQLETLAINRCRNVTAYSVRKFSNLWHLQTIEMSDLYQVTSAGIEAGLCGNAGMPLTH
INLSCCSLVQDDFISKLCDTHPYIVHLDLGSCTNLTNQSIFEISKSLKQIQFLRLAWCKK
ITDLGILGFEQNIEEERPVEVGCNKNYESTTIFRKPTSKEEKLKVEKLKKEIIEKELLRY
KLSNLSKLRDLDLSVCLGLTDIGLTQVLKFQELRYLNLNMIPITDTTVMALTAVNPSLEH
LVLAKCAAITDHAIEAVAKRLPRVNNLNISNCDSLTDKSIRFLQIHCKRLRSLDVSFCRN
ISPEAIDDLERCSQSLQTVNRRLVGGKTY
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgctagaattccacaagaggtcatcacgcatataatgcgtttcttgaatgtatct
gaccggaaggaggcggccctggtaaacaagctctggtacgaggcttcgctggaccccata
ctacagcgggatgttgtccttcactttaatggggatacaaattatgtcccactttctacc
gtcagtcacaggcgattatctcatttgaccttaagtcagctagataattccatgaatacc
aagcatgtcttgcttaagtcgtgtaaacaaatcagtgacagtttgaaatccttgtctttc
aaatcttgtaatattaccgaaagcacgtttgtagagattctttcttattgtataaatctt
acaagtattgatctcactaattgcaacagtatatttttgtctggtaaacttctggaaaga
aatacagatctgcagattttgagagagtcgttgaaaaaagtgaaagatttgaacctgtcg
tccattcgtcagctctctgatgtgacgtttaacagaatcgtaactatatgtcccaacgta
gaaagaatatggttggtagggtcgaacattgtgttcaacagtgatcattacattccaaga
ggaaaatcaaaggttgccagcagtgccgtgctaacttttcaaaacatacttgactttgtg
cgtgtgcaagccgctgttttaaccacattagacttaagccggaatcaaattaacgacgaa
gctttagagagtctggtgaccattcccgatctacacttacaagaagtgcatttgctggca
tgcaaggacattgaggacgaaggactcattgcactgagtcacaatcaaaagtctctgaag
gtcttgaacatcaaggaatgcatgggagtaactgactcgagcgtgagcgctgtggcggct
aatctagttcagctggagaccctcgccataaaccggtgtcgaaatgtgaccgcgtactcc
gtcagaaagttttctaacctgtggcacttacaaacgatagaaatgtcagatttgtatcaa
gtgacgtctgctggtatagaagctgggctctgcggcaatgctggcatgccactgactcat
atcaatttgagttgctgttctttggtccaagatgactttatttcgaaattgtgcgacact
catccatacatagtccatttggacctcggctcttgcactaatcttacaaaccaaagcatt
tttgaaatatccaagagtctcaaacagattcaatttctgcggcttgcctggtgcaagaag
attaccgacctgggaattcttggatttgaacaaaacattgaggaagagagaccagttgaa
gtaggatgcaacaaaaattacgaaagcacaactatattccgtaaaccaacgtcaaaagaa
gagaaactgaaagttgaaaagcttaaaaaggaaataatcgaaaaagaactgcttcggtac
aaattgagtaatctttcaaagctgcgagatctcgatttgtcagtatgccttggtttgaca
gatatcggtttaactcaggttctgaagttccaagaacttcgttacttaaatctgaatatg
ataccaattaccgataccaccgttatggcgcttacggctgtgaatccaagccttgaacat
cttgttctagcgaaatgcgccgcaattacagaccatgctatcgaggcggtggcgaaacgt
cttccacgagtgaacaacttgaacatctccaactgtgacagtctgacggacaagagtatt
cgtttcctccagatccactgcaaacgtcttcgaagccttgatgtttcgttttgcaggaac
atctctccagaagcgatagacgacttggagagatgttcccagtcgctacaaacggtcaat
cgtcgcttagttggaggcaaaacatattaa
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