KEGG   Ostrea edulis (European flat oyster): 125663605
Entry
125663605         CDS       T09123                                 
Name
(RefSeq) F-box/LRR-repeat protein 20-like
  KO
K10275  F-box and leucine-rich repeat protein 9
Organism
oed  Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:oed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oed04121]
    125663605
Ubiquitin system [BR:oed04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     125663605
SSDB
Motif
Pfam: LRR_4 LRR_6 LRR_At1g61320_AtMIF1 F-box-like LRR_RPS2 LRR_At5g56370 F-box F-box_5 DUF5834 LRR_14 PyocinActivator
Other DBs
NCBI-GeneID: 125663605
NCBI-ProteinID: XP_048751842
LinkDB
Position
1:19661767..19668938
AA seq 629 aa
MAARIPQEVITHIMRFLNVSDRKEAALVNKLWYEASLDPILQRDVVLHFNGDTNYVPLST
VSHRRLSHLTLSQLDNSMNTKHVLLKSCKQISDSLKSLSFKSCNITESTFVEILSYCINL
TSIDLTNCNSIFLSGKLLERNTDLQILRESLKKVKDLNLSSIRQLSDVTFNRIVTICPNV
ERIWLVGSNIVFNSDHYIPRGKSKVASSAVLTFQNILDFVRVQAAVLTTLDLSRNQINDE
ALESLVTIPDLHLQEVHLLACKDIEDEGLIALSHNQKSLKVLNIKECMGVTDSSVSAVAA
NLVQLETLAINRCRNVTAYSVRKFSNLWHLQTIEMSDLYQVTSAGIEAGLCGNAGMPLTH
INLSCCSLVQDDFISKLCDTHPYIVHLDLGSCTNLTNQSIFEISKSLKQIQFLRLAWCKK
ITDLGILGFEQNIEEERPVEVGCNKNYESTTIFRKPTSKEEKLKVEKLKKEIIEKELLRY
KLSNLSKLRDLDLSVCLGLTDIGLTQVLKFQELRYLNLNMIPITDTTVMALTAVNPSLEH
LVLAKCAAITDHAIEAVAKRLPRVNNLNISNCDSLTDKSIRFLQIHCKRLRSLDVSFCRN
ISPEAIDDLERCSQSLQTVNRRLVGGKTY
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggctgctagaattccacaagaggtcatcacgcatataatgcgtttcttgaatgtatct
gaccggaaggaggcggccctggtaaacaagctctggtacgaggcttcgctggaccccata
ctacagcgggatgttgtccttcactttaatggggatacaaattatgtcccactttctacc
gtcagtcacaggcgattatctcatttgaccttaagtcagctagataattccatgaatacc
aagcatgtcttgcttaagtcgtgtaaacaaatcagtgacagtttgaaatccttgtctttc
aaatcttgtaatattaccgaaagcacgtttgtagagattctttcttattgtataaatctt
acaagtattgatctcactaattgcaacagtatatttttgtctggtaaacttctggaaaga
aatacagatctgcagattttgagagagtcgttgaaaaaagtgaaagatttgaacctgtcg
tccattcgtcagctctctgatgtgacgtttaacagaatcgtaactatatgtcccaacgta
gaaagaatatggttggtagggtcgaacattgtgttcaacagtgatcattacattccaaga
ggaaaatcaaaggttgccagcagtgccgtgctaacttttcaaaacatacttgactttgtg
cgtgtgcaagccgctgttttaaccacattagacttaagccggaatcaaattaacgacgaa
gctttagagagtctggtgaccattcccgatctacacttacaagaagtgcatttgctggca
tgcaaggacattgaggacgaaggactcattgcactgagtcacaatcaaaagtctctgaag
gtcttgaacatcaaggaatgcatgggagtaactgactcgagcgtgagcgctgtggcggct
aatctagttcagctggagaccctcgccataaaccggtgtcgaaatgtgaccgcgtactcc
gtcagaaagttttctaacctgtggcacttacaaacgatagaaatgtcagatttgtatcaa
gtgacgtctgctggtatagaagctgggctctgcggcaatgctggcatgccactgactcat
atcaatttgagttgctgttctttggtccaagatgactttatttcgaaattgtgcgacact
catccatacatagtccatttggacctcggctcttgcactaatcttacaaaccaaagcatt
tttgaaatatccaagagtctcaaacagattcaatttctgcggcttgcctggtgcaagaag
attaccgacctgggaattcttggatttgaacaaaacattgaggaagagagaccagttgaa
gtaggatgcaacaaaaattacgaaagcacaactatattccgtaaaccaacgtcaaaagaa
gagaaactgaaagttgaaaagcttaaaaaggaaataatcgaaaaagaactgcttcggtac
aaattgagtaatctttcaaagctgcgagatctcgatttgtcagtatgccttggtttgaca
gatatcggtttaactcaggttctgaagttccaagaacttcgttacttaaatctgaatatg
ataccaattaccgataccaccgttatggcgcttacggctgtgaatccaagccttgaacat
cttgttctagcgaaatgcgccgcaattacagaccatgctatcgaggcggtggcgaaacgt
cttccacgagtgaacaacttgaacatctccaactgtgacagtctgacggacaagagtatt
cgtttcctccagatccactgcaaacgtcttcgaagccttgatgtttcgttttgcaggaac
atctctccagaagcgatagacgacttggagagatgttcccagtcgctacaaacggtcaat
cgtcgcttagttggaggcaaaacatattaa

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