Ostrea edulis (European flat oyster): 125663766
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Entry
125663766 CDS
T09123
Name
(RefSeq) serine/threonine-protein phosphatase alpha-2 isoform
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125663766
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125663766
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125663766
03019 Messenger RNA biogenesis [BR:
oed03019
]
125663766
03041 Spliceosome [BR:
oed03041
]
125663766
Enzymes [BR:
oed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125663766
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
125663766
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125663766
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125663766
Spliceosome [BR:
oed03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125663766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
125663766
NCBI-ProteinID:
XP_048752077
LinkDB
All DBs
Position
1:complement(24230151..24238904)
Genome browser
AA seq
328 aa
AA seq
DB search
MADTDKLNIDSIIARLLEVRGSRPGKNVQLTESEIRGLCLKSREIFLSQPILLELEAPLK
ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDL
QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAKFLHKHD
LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
KKKFPYGGLNAGRPVTPPRGQAKGKGKI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacagataaacttaatatagacagtattatagcaaggttactggaagttcga
ggatcaaggcctggaaagaatgttcaactgacagagtcagaaatccgtggtctttgttta
aaatcacgtgaaatatttctgagccagcctatattattggagttggaagcaccattgaaa
atatgtggagatatccatggtcagtactatgacctactacgtctgtttgagtatggtgga
ttccccccagagagtaactacctgttcctaggagattacgtagacagaggaaaacagtca
ctggagacaatatgtctactcctggcctacaaaatcaaatacccagaaaactttttcctc
ctcaggggtaaccatgaatgtgcaagcatcaacagaatctatgggttttacgatgaatgt
aaaagacgatacaacataaagttgtggaagacattcacagattgcttcaactgtttacca
attgcagccattattgacgaaaaaatattctgttgtcatggaggtttaagtccagacctg
caatctatggaacaaatcagacgaatcatgagaccaactgatgttcccgaccagggtctc
ctatgtgacctgttgtggtctgaccctgacaaagagactatgggatggggagaaaatgac
agaggagtctccttcacatttggggctgaagttgttgccaaattcttacacaaacatgac
cttgaccttatttgtagagctcatcaggtggtagaagatggatatgaattctttgcgaaa
cgacagcttgtaacgttattctctgcaccaaactactgtggtgaatttgacaatgcaggt
gctatgatgagtgtggatgaaacactcatgtgctccttccagatacttaaacccgcagac
aaaaagaaatttccatatggcggacttaatgcaggtcgacctgtcactccccctaggggc
caggccaagggcaaagggaaaatatag
DBGET
integrated database retrieval system
