Ostrea edulis (European flat oyster): 125663808
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Entry
125663808 CDS
T09123
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125663808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125663808
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125663808
mRNA degradation factors
5'-3' decay
Decapping complex
125663808
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
CA109-like
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
125663808
NCBI-ProteinID:
XP_048752142
LinkDB
All DBs
Position
1:complement(26062914..26099437)
Genome browser
AA seq
1400 aa
AA seq
DB search
MDQGDSPSSSLQSTGDTGQLLQELLNLQKSNALSTGSLIVPPGTTLNQVTESGEVPGSGG
ATNPTLAELMMTMYDAPVPRQLITLQGSDTANSFSVYGREVEIITSKPNDAISSQAKTGS
NKVKTTPVVKFEWEPVYYVGNLVTLHRLNIYAAYSLRGKSGGVVRIINRKTAERALLKDL
TGRVVDIAFAYTDDVILAAVDEIGNLLVHSVKEGEDKKLQVPLLLKISRPRGTPSTEYHR
VIWCPFIPDDCDDSSATESSTQDASRVLVLTHGERSEILNVDIVTREHGSGPISVEDVEY
GLIRIDSHTQAVMDAAFSPDGTALATASLDGEVKFFQVNMSESTSPRCLHQWKPHDGKQL
SSLFFLDDHRNSSADTQFWRFAVTGACNNQEIKIWSCESWVCLQTLRFMCPPDLPTNFSA
EPCMKAGLDLSAKYLVLSDIKRQVLYVLQIHQDSAANTAHVSSVSEFLLAQSCLSFAILD
ASKKKFKKVTEESHLDEITTGELDRDDGGEDPEQRQEVVNASGVQIKLYTVHPKALQELL
IRFRPESSAPPAPTPSVSTISHDDTGLQDALSDMSFSLDSSRVDNTSLQQDPPVLLTPDA
FTTASPRKDLSITDPIRASGSSTSSFTQVTGLNEEMFSPHSSGDQSVLSDGSTITQTPTE
KDVVSPGRYQQEVTPTKLPQTGESLTSIEESTAEDKPSALQKVCVDDLFDSTRQSLEQTL
NSTDSTRQSPENTSSTTGFEVGQLGAQKLSTMKESYDENDEEVAEVLGESYKEEEEEAVE
EEVEESLEGGPQSTQPFEEHSGDMGSDTMPTSWPKPPDVSTEARGLEDVQNEDDYTEDDD
VQVEEEEEVSKGENYGKTEDNRNGLHHLQDGSSEEIEEQIEEHSEDLQSPKEAPMAAPVA
KQREIIKEIHTKEIIRENVDKESITALSENIHSILAVLEAQNSKIESLQYQLAEQQARQT
EIHRQQVENELVAQPSQNIEEHLGKLEGIVTSRVERMFTQHAQRENQRMRELLQQTEQRD
KQRQDRLQQILIQTMNNAVTSNMEKQVRQEMCNTVLPNVTRILEPLKEQMHQEIAQKLTA
ADSIMKDSIGKMVRSRQTIEALGVAAGSVLQTPIQLAYREAFQNIVVPSFDRAMQNIFQQ
VNEVFVKGTRETTKHLDAHLNELREKHTEARDPIIAQLRKLTESFQSSADSIQQQVLSTI
QSRVNAEIQSALSNLEESIVRYVRQAVKEEVSIAVREQGASISDSVLLAMRSGAVTPVQV
TPDPHQLQTQILSLLRQGQLNTAFQQALSASNLDLVVFVCETVNPSQVFNQSPCPLQQPV
LLSLIQQLSADIGNNTELKHKYLEEAVMNLDTSNPVTQGHMRGVLIGLIHKLKTYITANP
NDKTTRSLRMLQMASESLLK
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggggatagcccatcttcgtcccttcagtccaccggcgacacaggccagctc
ttgcaagagttgttaaatcttcagaaatcaaacgctctttccacaggaagtttgattgtt
ccacctggtacaacactgaatcaagtaacagaaagtggcgaagttcccgggtcaggtggt
gcaaccaatccaacgctggcagaactaatgatgacgatgtatgatgcaccagtaccaaga
caactgatcactctacaaggaagtgacactgccaacagttttagtgtgtatggtagagag
gtggagataattaccagcaaacctaatgatgcaattagctctcaagccaaaacgggcagc
aataaggtgaagactacgccagttgtgaagtttgaatgggagccagtgtattatgttgga
aatttggttacgctacaccgacttaatatttatgctgcgtactcgctccgagggaagtct
ggtggtgttgtgcggatcattaacaggaagacagcggagcgggcgttactgaaggatcta
acaggacgtgtggtagacatagcattcgcttacaccgatgatgtcatcctggcagctgtt
gatgaaataggaaatcttcttgtccacagcgtcaaagagggagaggataaaaagcttcaa
gtaccactgctgctgaagatatctcgtcctcggggaaccccctccacggagtaccatcgg
gttatctggtgtccctttattcctgacgactgtgacgacagttccgctacagagtcttct
actcaggatgcgtccagagttctggtgctgacgcacggagaaaggtctgagattttgaat
gtagacatagtgacaagggagcatggcagcggacctatatcagtagaggatgtggagtac
gggctcatccgaatcgacagtcacacacaggctgtgatggatgctgccttttctcctgat
ggcacagccctcgctacagctagtctagatggagaggtcaaattcttccaagtcaacatg
agtgaaagtacttctccaagatgtttacatcaatggaagccacacgatgggaaacagttg
tcttccttgttctttctggatgatcacagaaactccagtgcagatactcagttttggagg
tttgctgtcactggagcctgtaataaccaggaaattaaaatctggagctgtgaatcttgg
gtctgtctccagacattgagatttatgtgtccaccagatctgcccacaaactttagtgct
gaaccctgtatgaaagcaggattagatctgagtgctaagtacttggtgctctctgatata
aagagacaggtgctgtatgttttacaaatacaccaagactcggctgccaacacggctcat
gtcagttctgtttccgagttcctcttggcacaatcctgcctcagctttgccatcctggat
gccagcaagaagaagtttaagaaagtcacagaagaatctcatctggatgaaataaccact
ggtgaattggatcgagatgatggaggggaggatccagaacagagacaggaggtggtaaat
gcctcaggagtacagatcaagctctacactgtccatcccaaagccctgcaggagttgctg
attcgatttcgacccgagtcgtctgcaccccctgccccgacaccttctgttagtacgatc
tctcatgatgatacaggtctccaggatgctttgtctgacatgagtttcagtctggacagt
agccgagtggacaacacctccctccaacaagacccacctgtcctgctcacacctgatgct
ttcactacagctagtccaagaaaagacctgtctataactgacccaatccgagccagtgga
tcaagtacaagcagctttacacaagtcacaggtctaaatgaggaaatgttctccccccac
agttctggggaccagtcagttttatctgatggtagcacaatcactcagacccccacagag
aaagacgtggtctctcctggcagatatcaacaagaagtgacccccaccaaactaccccag
acaggagagagtctgaccagcattgaggaaagcaccgcagaagacaaaccgtctgctctg
cagaaagtgtgtgtagatgatttgtttgatagcaccaggcaaagcctggaacagacatta
aacagcactgactccaccagacagtctccagaaaataccagcagcaccacagggtttgaa
gtaggtcagctgggggcacagaaactgtcaacaatgaaggaatcttacgatgagaatgat
gaggaggtagctgaggtgttaggggagtcttataaagaggaagaggaggaggcggtagag
gaagaagtcgaggagagcctagagggtggcccacagagcacacagccatttgaagaacac
agtggggatatgggttctgataccatgccaacctcttggcccaaacctccagatgtcagc
acagaggcgcgagggctggaggatgtacagaatgaagatgactacactgaagatgatgat
gtacaagtggaagaagaggaagaagtttctaagggagagaactatggaaagactgaagat
aataggaatggtttacaccacttacaggatggcagtagtgaggaaattgaggaacaaata
gaggaacatagtgaagatttacaaagtcccaaagaggcaccgatggccgctcctgtggcg
aaacaaagggaaatcattaaagaaattcacaccaaggaaataatccgggaaaatgtggac
aaagaatccattactgctctgagtgagaacattcacagtatactggcagtactagaggcc
cagaactctaagatagagtccctacagtaccaattagcagaacagcaggctcgtcagaca
gagatccaccggcagcaggtggagaacgagctcgtggcacagccatcacaaaacattgag
gaacacctcggcaagcttgagggtattgtgacatcacgagtggagaggatgtttacccag
catgcccagagagagaaccagagaatgagagaactattgcagcagacagagcagagagac
aagcagcgacaggacagactacagcaaatactgattcaaaccatgaacaatgcagtgacc
agcaacatggagaaacaagtccgacaggaaatgtgcaacaccgttcttcccaatgtgaca
agaattcttgagcctctgaaggaacagatgcaccaagaaattgcccaaaagctgaccgct
gctgactccataatgaaggacagtatagggaagatggtccggtcacgacaaacaatagaa
gcattgggtgtggctgcggggagtgtgttgcagactcccatacagctggcatacagggaa
gccttccagaacatagtggtgcctagttttgacagagccatgcaaaacatctttcagcaa
gtcaatgaagtcttcgtcaagggaactagggaaactacgaagcatttggatgctcatttg
aatgagttgcgcgagaaacacacggaggctcgtgatcctattattgcacagcttcgtaaa
ctgacagagagtttccagtcatcagctgactcgatacagcagcaggtgctctccacgata
cagagtagagtcaatgctgagatccagtctgcactgtccaacctagaggaatctatagtg
agatatgtcaggcaggcagtgaaagaggaagttagtatagcagtgagggaacagggagct
agcatcagtgacagcgtgctgctcgccatgagatcaggggccgtaactcctgtacaagtc
acacctgatccccatcagctacaaactcaaatactgagtcttttgagacaagggcaactc
aatacagcattccagcaggcattatcagcatcaaatcttgaccttgttgtatttgtgtgt
gagacggtgaatccttctcaagtgtttaaccagagtccatgccctctccaacaacccgtc
cttctgtccctgatacaacagctgtcagctgatataggaaacaacacagaacttaaacac
aaatatttagaagaggccgtgatgaatttggacacatcaaacccagtgactcaaggtcac
atgaggggagttttaataggacttattcataaactcaagacctacattactgccaaccca
aatgacaaaactactcgttcgttacgcatgttacaaatggcatcagaatcgttactgaag
tga
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integrated database retrieval system
