Ostrea edulis (European flat oyster): 125664384
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Entry
125664384 CDS
T09123
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03013
Nucleocytoplasmic transport
oed03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125664384
03015 mRNA surveillance pathway
125664384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125664384
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125664384
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125664384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125664384
NCBI-ProteinID:
XP_056007725
LinkDB
All DBs
Position
1:4689288..4710872
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AA seq
535 aa
AA seq
DB search
MADLDWGAEVESQEKSLTRESTGSGNHGNQSLNWAEEVERNDLSQEIDRISIGKNTSPSK
PSNAPAQSGPTQTSQPLPRPLNGAGAMAAGSSPNQDGAGASGDNEEKGTSKEDASLLQKL
INSKLLSTKANLEILQKDPNSPLYSVKSFEALNLKKELLEGIYKIGYNTPSKIQETALPV
LLADPPANMIAQSQSGTGKTAAFVLTMLSRVDTRLHYPQCLCIAPTYELALQIGQNVEDM
GKCMTDLKIIYAVRGEKLDRGTKLDGHLIIGTPGTVCDWALKLRFFDLKKINVFVLDEAD
VMIATQGHQDQSIRIQRGLRRDCQMLLFSATYEDDVMKFAQAVIPNSPIVIRLRREEQSL
DNIKQYYIECADQEGKFQALSNIYGSISIGQSMIFCATRRTAAWLAEKMTKEGHAVGLLS
GELSIEQRAAIINRFKDAKEKVLITTNVTARGIDVEQVTVVVNFDLPLTQDFRPDFETYL
HRIGRTGRFGKKGLAINMVDGRQSFSTLKQIEKYFGRKVEKLDVEDMEEVEKIGS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttagactggggagctgaagtggaatctcaggaaaaatcattgacaagagag
tccacaggatcaggtaaccatgggaaccagtcattaaactgggcagaggaggtggagaga
aatgacttatcacaagagattgacagaatatcaataggtaaaaacacgtcaccctcgaaa
ccctccaatgcgccagctcagagtggccccacccagacaagtcagccactcccgagacct
ctcaacggggcaggggcaatggctgctggctcatcacccaatcaggatggggcaggggca
tccggggataatgaagagaaagggacctcaaaagaagatgcctccctactccagaagttg
attaattcgaagcttctctccacaaaagcaaaccttgaaatcctgcagaaggatcctaac
tctccactgtactctgtcaaatcatttgaggcattaaatctgaaaaaagagcttttagag
ggaatatataagataggttacaacacaccgtcaaaaatccaggaaacggccctacctgtt
ctactagcagatccacctgccaacatgatcgcacagagtcagagtgggacaggaaaaaca
gcagccttcgtcctgaccatgctgagccgggtggacacaaggcttcactatccacagtgt
ctgtgtattgcacctacttatgaattagctctacaaattggtcaaaatgtggaagacatg
ggaaagtgcatgacagatctgaaaatcatatacgcagtccgaggagagaagttggacaga
ggtacaaaacttgatggacatttaatcatcggaaccccggggacagtgtgtgactgggct
ttgaagctccgtttctttgacctgaaaaagatcaatgttttcgtgttggatgaagcagat
gtaatgattgctacacaaggtcaccaagaccagtcgatcagaattcagaggggtttaaga
agggattgccaaatgttactattttcggccacatacgaggatgatgtgatgaaattcgcc
caggctgtaatccccaacagtcccatcgtgattcgactccggcgagaagaacagtcgctg
gataacatcaaacagtactacattgagtgcgctgaccaggaggggaaattccaagccctg
tccaacatctacggctctatatcaataggacagtctatgatattttgtgctaccagacgg
acagcggcctggctagcagagaagatgaccaaagagggacatgctgtaggtctcctgagt
ggagaattatcaatagaacaaagggcagccatcatcaaccgcttcaaagacgctaaagag
aaagttctcatcaccaccaatgtcacagctagaggtattgatgtggaacaagtgacagtt
gtggtgaactttgacctccctctcacacaagatttccgaccagatttcgagacctatctc
cacagaatcggtagaacgggtcggtttggtaaaaagggcttggcaataaacatggtggat
ggcaggcagtcgttttctacattaaaacagatcgagaaatactttgggcgtaaggtagaa
aagctggatgtagaggacatggaggaagtggagaaaatcggcagttaa
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