Ostrea edulis (European flat oyster): 125664534
Help
Entry
125664534 CDS
T09123
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3-like isoform X1
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00230
Purine metabolism
oed00670
One carbon pool by folate
oed01100
Metabolic pathways
Module
oed_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
125664534
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125664534
Enzymes [BR:
oed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
125664534
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
125664534
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
125664534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_2
CPSase_L_D2
RimK
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
DpnD-PcfM
CbiJ
Motif
Other DBs
NCBI-GeneID:
125664534
NCBI-ProteinID:
XP_056008778
LinkDB
All DBs
Position
1:complement(583838..631221)
Genome browser
AA seq
999 aa
AA seq
DB search
MATVLVLGGGGREHALAWKLAQSADVRHIYVSPGNAGTESNPKTSNVALNVKNFGEVRDF
CQKETVSLVLVGPEDPLAAGIADHLTSQGVPCFGPSAKAAQIEASKDFAKKFMSRHGIPT
ARFCSFTDVSEAYQHINQADYPALVVKASGLAAGKGVVVAETRQEACQAVRDMLNNKMFG
PAGETVVIEELLTGHEVSCLAFSDGSSISMMPPAQDHKQLKDGDTGPNTGGMGAVCPYPM
ISDKDLETVRQEVLQRAVDGMKQEGFPFIGVLYAGIMLTSSGPKVLEFNCRFGDPETQSI
LPLLESDLYEICRACVEGKLSQNLPHFTRDLYTAGVVLASGGYPGGYKKGLPITGIDGVE
KLGPRVQVFHAGTTKQEQGIVTSGGRVLAVVAMNSDLQSACSKAQRWAGFIQFDGAYHRS
DIGFRVLDRYNSITPHLSYKDSGVNIEAGNSLVKAIQPLAKETKRLGCDASLGGFGALFD
IKAAGFTDPILVSGTDGVGTKLKIAQAIGDHSTIGQDLVAMCVNDILAHGAEPLFFLDYF
ATGHLNVYTAKEIIAGIAAGCKQANCALVGGETAEMPGLYRGEDYDLAGFAVGAVERGQI
LPRVQQMNEGDVLIGLASSGLHSNGFSLVRKVVEKLGYGYDVPAPFSSGKTLGEEFLVPT
KIYVEELLPLMNQGCIKAFSHITGGGLMENLPRVLPEHLMARIDAGLWSVPAVFGWLADK
GNITASEMCRTFNCGVGGVVVIDKSQADYVLQYLITSGLTASVIGRLLSRQGGECVVIQN
LQQALSKSWKVPRVSQKKKVGVLISGTGTNLQALIDSTTGENNNCSSEIVVVISNKAGVL
GLERAQKAGIKTKVINHKDFGSRVEFDMEVDRSLREAGVEIVCLAGFMRILSGEFVKKWR
GHMLNIHPSLLPSFKGHNAHEQVIAAGVRISGCTVHFVEEEVDAGAIVVQESVPVYPGDT
ATSLADRVKRVEHTAFPQALELVASGQASLRGGVLQWGH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagttttagtgttaggaggcggcggccgtgaacatgcgttggcatggaaactg
gcacagtcagcagatgttcgtcacatttatgtgtcacctggtaacgcaggaaccgagagc
aaccccaaaaccagtaatgtggctttgaatgtgaagaactttggggaggttagagatttc
tgtcagaaggaaactgtgtcgttggttttggttggaccagaagatcctctggctgctggg
atagctgaccatctaactagtcaaggagtcccctgttttggccccagtgccaaggctgct
cagattgaggccagtaaggacttcgccaaaaagttcatgtccagacatggcattcctaca
gccaggttctgcagtttcactgatgttagtgaggcatatcaacatatcaaccaggcagac
taccctgccttggtggtgaaggccagtggattagcagcggggaagggcgtggtggtagct
gaaaccagacaggaagcctgccaagctgtcagagatatgttaaataacaagatgttcgga
ccagcaggggagacagttgtaattgaggaacttctaacagggcatgaagtgtcgtgcttg
gccttttctgatggttcctcaatttccatgatgcctcctgcacaggatcacaagcagctg
aaagacggagacaccggaccaaacactggaggaatgggggctgtatgtccttatccgatg
atatcggataaagacttggagaccgttagacaggaagtattacagagagctgtggatgga
atgaaacaggaaggcttcccatttattggtgttttgtatgctggaataatgctgacaagt
tctggtccaaaagttctggaatttaactgccggtttggggatcctgagacgcagtcgatc
ttacctctgttggagtcggacttgtatgagatttgtcgagcctgtgtggagggaaagctc
agccagaacttgccacattttacacgtgacctatacacagcgggggtggtactagccagt
gggggataccccggggggtataagaaaggattacccatcacaggtatcgatggagtggaa
aagctgggacccagagttcaagtattccatgctgggacaactaaacaggaacagggcatt
gtaacaagtggtgggcgtgtcctggctgtagtagcgatgaactctgacctgcagtctgcc
tgttcaaaagctcagagatgggcgggttttattcagtttgatggagcttatcacagatct
gatattggattcagggtactagacaggtacaattctataaccccccatctctcatacaaa
gactctggagttaacatagaggcaggaaacagtctggtaaaggctattcaaccattggct
aaagagactaagagacttggatgtgatgctagtctgggtggatttggtgctttgtttgac
attaaggcagcaggatttacagatcctatcctggtgtctggtacagatggagtgggcaca
aaactcaaaattgctcaagccattggtgaccactctactattggtcaggacttagtggcc
atgtgtgtgaatgatattttggcccacggagcggagccactgttcttcctggattacttt
gccacagggcacctgaacgtttacactgccaaggaaatcatcgcagggatagctgctggt
tgtaaacaggcaaactgtgcccttgtgggtggggaaacggcagaaatgccaggattgtat
cgtggagaggactatgatctagcagggtttgctgtcggagctgtggaacgtggacagatc
cttcccagggtgcaacagatgaatgaaggagacgttctaattggtctggcatccagtggt
ctccatagtaacgggttcagtctggtgaggaaggtggtggaaaagttgggatacggatac
gatgttcctgcccccttcagtagtggaaagactttgggagaagagtttctggtgcctacg
aagatttatgtcgaggagttacttcccttgatgaatcagggttgtataaaagctttttct
cacattaccggaggaggtctgatggagaatctcccccgcgttttaccagaacacctaatg
gctagaattgatgctggactgtggtcagtacctgcagtgtttggctggctagcagacaag
ggtaacattacggccagtgagatgtgtcggacctttaactgcggtgtgggaggagttgta
gtgattgacaagtcccaggctgactacgttttacagtatttaataacatcaggtctgact
gcctctgtcattggcagacttctcagtagacaagggggagagtgtgttgtgatccagaat
ctgcagcaggctctgtccaaatcctggaaagttccgcgtgtttcccagaaaaagaaagtg
ggggtcctcatctcggggacaggaaccaatcttcaggctttgatagacagcactactggg
gaaaacaacaattgttcatctgaaatcgtcgtagttatctcaaataaagctggggtgcta
ggactcgaacgtgcacaaaaggcagggatcaaaacaaaggtaattaaccacaaggacttt
gggagtcgtgtagagtttgatatggaggtagacagaagtctgagggaggctggagtggag
atcgtctgtctggccggcttcatgaggattctctcaggcgagttcgttaagaagtggagg
ggacacatgctaaacattcatccatcgctgctgccatctttcaaaggtcacaacgcacat
gaacaagtcatagcagcaggggtcagaatttctggctgtacggttcactttgtagaggag
gaggtagatgctggagccattgttgtccaggaatctgtccctgtgtatccaggggatacc
gccacttcattggctgatagagtaaagagggtggagcacacagccttcccacaagcccta
gagctggtggctagtggtcaggccagtctgagaggtggagtcctgcagtggggtcattag
DBGET
integrated database retrieval system
