Ostrea edulis (European flat oyster): 125665199
Help
Entry
125665199 CDS
T09123
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125665199
Enzymes [BR:
oed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
125665199
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Other ribosome biogenesis factors
125665199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
Methyltransf_31
Methyltransf_25
RsmF-B_ferredox
GCD14
Motif
Other DBs
NCBI-GeneID:
125665199
NCBI-ProteinID:
XP_048753780
LinkDB
All DBs
Position
10:16383249..16401306
Genome browser
AA seq
579 aa
AA seq
DB search
MSEVKKNSNLYIEAASVLHEIYDKKGSIKTSVYRSSFQDKQMLTALVSQTLRYAKVLETV
TKRTKLLETNPLLWNDEMLARALLYDYMIGPGLFKPGRLKVVVQKNKECITCEFDRLLTA
YGVQHYTDLPCSTTEALPRYVRVNLIKASVQETIESFVEEGWLLVPTPADVDSFIETCKN
LGESEFVKDFHLHDLLVFPAYTDFHNHHLVQSSKVILQDKASCLPAHILSPPEGAVVVDS
CAAPGNKTSQLASLMGNTGTIYAFDHKEERIAIFQERMEAAGVTCKVARCMDFLRVKTDS
QTYKDVQYVVVDPSCSGSGIVNRLDKLTNDDSSTSKHRLEQLHKLQAQILRHAFSFPNVQ
KIVYSTCSVHEEENEQVCEEIYNRFKERFKIRKVMKDWPERGRDGYHKSYRYIRAYPEKT
LTNGFFVASFKRRKSKHGKSEENGVECGTSKDGMKDGQESYSDKEEDRVERKKEKQMKRL
GKDSNTKEEGQVEGEINVGGKERAKKRKKDQFMEEEGESETGVKIKRKETVGSEENRFYT
QVVKSNQTPISNCNLDCGNNSIDGKSRKKHKKKRPGKAE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtgaaaaagaattccaatctctatatagaggcagcgagtgttctacatgaa
atctacgacaaaaaaggatcgatcaaaaccagcgtgtatcgatcttcattccaggacaaa
cagatgttgacggccttagttagccagacccttagatacgctaaagttctggagacggtc
accaagcgaaccaaacttctggagacaaaccccctactatggaatgatgagatgctggcc
agagcgttattgtatgactacatgattgggccagggctgtttaaacctgggagattaaag
gttgttgtacagaaaaacaaggagtgtatcacatgtgaatttgacagactgctgacagct
tatggtgttcaacactacacagatctaccctgctctacaacagaagctctgccacggtac
gttagagtaaacctgataaaagcctctgtgcaggagacaatagagtcctttgttgaagag
ggatggttactggttcccacgccagcagatgtggacagctttatagaaacttgcaagaat
ctgggagagtctgagtttgtaaaggacttccatcttcatgatctgttggtgtttcctgct
tacacagattttcacaatcaccatcttgtacaaagcagcaaggtcattctgcaggacaag
gccagttgtctccctgctcacatcctgtcaccaccagagggagctgtagtggtggacagc
tgtgctgccccaggcaacaagacaagccaactggccagtttgatgggaaacaccggaacg
atctatgcctttgatcacaaagaagaaaggattgcaatatttcaggagcgtatggaggca
gcaggagtgacctgcaaggttgcgcggtgtatggactttctcagagtgaagacggacagc
cagacgtataaggatgtacagtatgttgtggtggacccttcatgtagtggatcaggaatc
gttaatagattggacaagttgactaatgatgactcttctacatccaagcaccgcctcgaa
cagctgcacaaactccaggctcagatactaagacatgccttttcattcccaaatgtgcag
aagattgtatactccacttgttcagttcatgaggaggagaatgaacaagtctgtgaggaa
atctataacagattcaaagaaagatttaaaattcgcaaggtcatgaaagattggcctgaa
agaggaagggacggataccataagagttatcgttatatccgcgcatacccagagaagacc
ctgaccaatggattctttgtggctagctttaaaagacgtaaaagtaaacatgggaaaagt
gaggaaaatggagtggaatgtggaacgtcaaaagatggaatgaaagatggacaagaaagt
tatagtgacaaggaagaggatagagtggaaagaaagaaagaaaaacaaatgaaaaggtta
ggaaaggacagcaacacaaaggaagaaggacaggtagaaggggaaataaatgtgggggga
aaggaaagagcaaagaaaaggaaaaaagaccagttcatggaggaggaaggagagagtgag
acaggtgtgaaaattaaaagaaaagaaacggttggatcagaagagaacaggttttacaca
caggtggtcaaaagtaaccagacaccaattagcaactgtaatttagactgtggaaataat
tcaatagatggaaaaagcagaaagaagcataaaaagaaaagacctggaaaggcagaataa
DBGET
integrated database retrieval system
