Ostrea edulis (European flat oyster): 125665360
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Entry
125665360 CDS
T09123
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125665360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125665360
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125665360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD_LRWD1
Beta-prop_SPT8
VPS8_N
Beta-prop_SCAP
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
125665360
NCBI-ProteinID:
XP_056006954
LinkDB
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Position
10:32065040..32099680
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AA seq
834 aa
AA seq
DB search
MGEDNFIVANVSGSSIIKHKPTFSLDSRCLFVISGKNIKVFNVNSGECMHYLTGHHDEVT
GVIVSPKNKLQLFSSSIDETILLWDYVDGVQLKRYSLHAPLHGLVGFAKDETNLFVMVHR
NPKGIDIRDKNIKHYYDVCEFDPKSGSLDMRLKTIVNRKLVGVGAKGRYLVAAKKKKVFI
YDCRKCEIFRHSLSDDFDKAITCVTCHPTEDCFVTGCQNGKIIHWWNFLTKNEVVKSVYS
WHALSVLDLQFTDEGSQLLSGGHECVLVKWQYNSKEREFLPRLRAPIGHVVCSPDNQVFA
TCHQDNCVNLISNTFELLHVIDGLSLCHLHTQLWVRLSVRLLYDPRTKALVTNGRVGHLQ
FYSIEADKQLYDLDIVQENYTSPEDLSKPLYPTEVTNAAFSSQGEWLATVDVWDDGVMSP
DIQLKFWMYQEESQEYILNTIVHYPHDKKVVDLKFRPHGDDLDVVPTVVTSGGDGKFKTW
TCVDDSDIYRKNTKWICHNVGYYKDRPAGPVSFSEDGSLLAVGFSSTVTIWDTENNVLRH
CFNTHSDDNRDIKFCEFGHQSCCHLLVSVSDDLLCVWNLLTCAVVWSVQVDVSVLATDPL
SPYMAVIDSEQKLYVFKPSSSDIVYSKPLISKSPVTCAIFIPQTKGSTKGKQLEWQTSSQ
LYFFNEEQELQTVVNEEEEEKRSSLDPRAIQENLPSTPFSVFLGGERKSVQDTGSQVARL
APSIITKQILESAPHAQPPVTSLCLPFLQSLILGKQTEREENEEEDEDEIEVKSQNSDSD
MEVEQSLKSLKIDSQNAMQKDSFDWLSNLHVTETNDVLNSLALSTKDWISEIKT
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagataatttcatagtggcgaatgtttcgggttctagcattataaaacataaa
cccacgttttcattagactcgagatgtctgtttgtgatatctgggaaaaacatcaaagtg
ttcaatgtcaacagtggagaatgcatgcattatctaaccggccatcatgatgaagtgacc
ggtgtcattgtcagtccaaagaataaactgcagcttttttccagttccatagacgagaca
attttactttgggactatgttgatggagtccagttaaaaagatactccctccatgctcca
ctgcacggccttgttgggtttgcaaaagatgagacaaacttatttgttatggttcatcgc
aatcctaaaggaatagacatacgagacaagaatattaaacattattatgatgtttgtgag
tttgaccccaaatcagggtctttggacatgaggcttaaaacgattgtaaaccgaaagctt
gttggtgttggtgccaagggaaggtacttggtggcagcaaagaagaaaaaagtcttcatt
tatgactgcaggaagtgtgaaatttttaggcacagtttgagtgatgattttgataaagct
ataacatgtgtgacttgtcatccgactgaagattgctttgtgactgggtgtcaaaatggc
aagattattcactggtggaatttcttgacgaagaatgaagttgtgaaatcggtctacagc
tggcatgctctgtccgtgttagatctacaattcactgacgaaggttcacagttattaagt
ggaggtcatgagtgtgtgttagtgaaatggcaatataactccaaagagagagaatttctt
ccccgtttgagggccccaataggccatgtggtctgttcccctgacaaccaagtgtttgcc
acctgtcaccaagacaactgtgtgaacctgatttctaatacctttgagctgctccatgtg
attgatggtttgtcgctgtgtcacctacatactcagttgtgggtcagactgtctgttcgt
ctcttatatgacccaaggacaaaggcactagttaccaatggacgggttggacacttgcag
ttctattccattgaggcggataaacagctgtatgatctggatattgtccaggagaattac
acatcaccagaagacctctccaaaccattatacccaacagaggtaaccaatgctgctttc
agtagtcagggggagtggttagccacggtggacgtttgggacgatggggttatgtcccct
gatatacagctcaagttttggatgtatcaggaggaatcacaagagtatatcctgaacaca
attgttcattatccccatgacaagaaagtggttgacttaaagttccgtccccatggtgat
gaccttgatgtggtccccactgtagtgacatctggtggtgatggcaagttcaaaacatgg
acttgtgtggatgattctgatatttacaggaagaatacgaagtggatatgtcacaacgtg
ggttactacaaagatcggccggcgggcccggtgtcattctcagaggacggatcccttctg
gccgtgggattttcctcgacagtgacgatttgggacacggaaaataatgtactccggcat
tgcttcaacactcactcagacgacaaccgagatatcaaattctgtgaattcggccatcag
tcctgttgtcatctcttggtcagtgtgtccgatgatttattgtgtgtttggaacctcctt
acctgtgcagttgtatggagtgtgcaagttgatgttagtgttttggccacagatcctttg
tcaccctatatggcagtcattgacagtgaacagaaattgtatgtctttaagccctccagt
tcagacattgtctattccaaacctttaatatccaagtcgcctgtcacgtgtgcaatattc
atacctcaaacaaaaggttccacaaaagggaaacaactagaatggcagacctcatcacag
ctctatttctttaatgaagagcaagaacttcaaactgtggttaatgaagaggaggaagag
aaacggagcagcctagacccgagagccattcaggagaacttgccctccacgccattcagt
gtgttccttgggggtgagaggaagtctgtacaggatacaggcagtcaggtggcgagactc
gcaccctctatcatcaccaagcagattttggagtcagcaccacatgcccagccaccagtt
acctccctttgtttgccgttcttacagtctttgattcttggaaaacaaaccgaaagagaa
gaaaatgaggaggaggatgaggatgaaatcgaggtgaaatctcaaaattctgattcggat
atggaagtagaacaatctcttaaatcattgaaaattgattcccagaatgcaatgcagaaa
gacagttttgattggttgagtaatttacatgttactgagactaatgatgtgttgaacagc
ttggctttaagcacaaaggactggatctcagaaataaaaacgtga
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