Ostrea edulis (European flat oyster): 125665620
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Entry
125665620 CDS
T09123
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein-like
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125665620
Membrane trafficking [BR:
oed04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125665620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Patched
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR54
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_DCAF4
YobH
CPSF_A
SecD_SecF_C
Motif
Other DBs
NCBI-GeneID:
125665620
NCBI-ProteinID:
XP_048754317
LinkDB
All DBs
Position
10:25158645..25192905
Genome browser
AA seq
1373 aa
AA seq
DB search
MKSLQEYVTRIFYTHGLFCASHPYSILSVVICIMLTSFYPLVNMPLPGNVPLQHREPLVS
YRVPSEDSPKTPTPQTGRHPTDLLKPPWYLGVPVGYIQQIIVKATVSPWKQEYMIPEDAF
RSPLLRVFEILEELEKFKFRDGSKEYALSDVCLRVGEVLPKIKFKEFLPEYSCLTLSPAN
FWFGRKDIYLGDGEILKTLFKRHGQPLETPPYLRDVLFGVPWKSSGISRYFIRNQQRTIS
FAVSIALKTYDQRFLLALRSRLEDLYPETAKNVNNSQINSMVHIHYPNSKVFTEHTYLII
TYVFLLMYIYFSVRKIEMVKSKWGLALSAVVTVVTSLLMSVSFCSLFGLTPTLNGGEIFP
YLVVFVGLENVLVITKSVVSTPLDQDVRFRIAQGISREGWSITKNLATELIIVVGGFFTF
VPAIQEFALFAMVGLLTDFFLQHVFFLTTLSIDIRRMELSDLHKNIRTSVSEGQLGYPPG
SKVIEPLVLCPVRGFMSASSVEVTDKASQKKHRRTSSNVSLGPPSSLADTSRMSRRLRLI
DFLADTRVIQRFIMFCTVVWIGLIVYKSGVLEHFSNPNAQNATQDSTQQAVPPAEELSRV
GSREGQSTVRQSSRSWWFQGELVDPEGAVKHREVELWQDLSYKHWPTLFGYYNISLYGKF
ISILPSLHLSVIVDPNEAISLRHPSENAGKTPQQIKKEIEQISQEQMSEAKRVESDVLPD
DSIKGLLDSLPNYVYDSDHLRKLYDPEELKKLYPKSQRELVSTLLLVLFSAICLSYFALA
LYHCICPKNYARWRSRWFRGQHRKREKTGEYYKQIKESVPKVLKGHLQEIECVATDGQYI
ISACLGGQLRVWDSITGDCVTVIHRKGATPPVKRKPCLGRNINDSDADLYAEYHGNGSHS
NSSDPEEGDCQIAYHRQKTDSQGLAMQGKKLFQNQPNLSGTIHTNFFQAPPSPVSHTSPT
SLDPPTLFTPGSSPLSSTSLSQLTSDSFDFQSRFQPLFDEHTQYLTENPLEEDVFPDVRS
RSWSAGDNPLTTEHDAALFDSGFEGNNAPAIWCLACCQGLIVTGCGNGRIEFWESTSGNL
KYIYGENQTGVTALCIVNKRVVAARLDGSLDFLEIETFHNPIFTSPIPSTSSHIKGHVRH
HSQHKVVVMESLKKWEEILHVTLVKYVKAHQQPIMSLKCEGGRVISASQDHSLKVFRLED
CWCLYTLYGHTTKITALHADKSPPFNVASGDAEGTTRLWDLHTGTCLHKVKVHEAAVVAL
TCTIKYVISSGLDDRLCLWDRKRGTLVHELEMDPCGNNCMSLLTSHLLVLGGQGYIQLID
LDKGEILRRVSVGSSDKSAFVNQIHVVQNTVIVCDYASEMKVIQFPTVLEKSD
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgctgcaggaatacgtaacccgtatcttttacacacatggactgttctgtgcg
agccacccttactctatcctatccgtggtcatctgtatcatgctcacctcattttatccc
ttggtgaacatgccgctaccaggaaatgtcccgttacaacacagagaaccgctagttagt
tacagagtcccgtcagaagattcccccaaaactcccaccccccagactggccgacatccg
acagacctccttaaacctccctggtatctaggggttccagttggttacattcagcaaatt
attgtcaaggcaacagtctcaccatggaaacaagagtacatgattccagaagatgcattt
aggtcacctttactgcgtgtgtttgaaattctagaagaattggaaaaatttaaattcaga
gatggctcgaaggagtatgccttgtctgacgtgtgtctgcgagtgggtgaagtcttgcct
aagatcaagttcaaagaattccttccggaatattcctgtctcacgctctcaccagccaac
ttttggtttggcaggaaagacatatatcttggagatggggagattctcaaaaccttgttt
aaacggcatggtcaaccattggagacaccgccttatctcagagacgtgttgtttggagtt
ccgtggaagagttcggggatttctcgctacttcattaggaaccaacagagaactattagc
tttgctgtctctatcgccctgaaaacttatgatcaaagatttctcttggccttgaggtca
aggctggaagatctctatccagagacggcaaagaatgtgaacaacagccagatcaacagc
atggtgcacatccattatcccaacagtaaagttttcaccgagcacacctacctcatcatc
acctacgtgtttcttctcatgtatatatacttctctgtcaggaagattgaaatggtgaag
tccaaatggggactggctctcagtgcagtcgttaccgtggtgacctcgcttctgatgtcc
gtcagtttctgttcattgtttggactgactcccacacttaatggaggtgagatttttcca
tacttggttgtgttcgtgggtctggagaatgtgctggttattacaaaatcggttgtatca
acaccactggaccaggatgttagattcagaatcgcacaaggaataagtcgtgagggatgg
tcaatcacaaagaacctggcaacagagctcatcattgttgtgggaggcttcttcaccttt
gtaccggctattcaggaatttgccctgtttgccatggtagggctgctgacggatttcttc
ctacagcatgtgttctttctcactactctgtccattgacatcagaagaatggagctgtca
gatcttcacaagaatataaggacctccgtgtcagaggggcagctgggttatcccccaggg
tccaaggtcatcgaacccctggtcctgtgtccagtgcgaggcttcatgtctgcctcaagt
gtggaagtcactgataaagctagtcagaagaaacaccgccggacatcttctaatgtctcc
ctcggcccgccgtcatcgctggcagacaccagtcgaatgtcgagacgcttacggcttatc
gatttcctggctgatacccgagttatccagagattcatcatgttctgcactgtggtatgg
attggactaatcgtgtacaagagtggagtcttagaacatttctctaaccccaacgcacaa
aatgcaacccaggattccactcagcaggcagtaccacctgctgaagaactctcccgtgtt
ggaagtagagaaggacagagcactgttagacagtctagtagatcgtggtggtttcagggt
gagttggtggatccagagggagcggtgaaacaccgggaagtggaactctggcaggacttg
tcatacaaacattggcccacattgttcggatactacaacatcagtttatatggaaaattc
atatccatattacccagtctccatctctctgtcattgtggacccaaatgaagctatttcc
ctacggcaccctagtgaaaatgcagggaaaacacctcagcagattaaaaaggaaatcgaa
cagatatctcaggagcagatgtcggaggccaaacgagtggagtcagatgttcttcccgat
gacagcattaaaggactgcttgattcactgccaaattatgtttatgattcagaccatctt
agaaagttgtatgaccctgaagaactgaaaaagctgtaccccaaatctcagagagaactc
gtctccactcttctcttggtgctgtttagtgctatatgtctctcctactttgcactggca
ttgtatcactgtatctgtcccaaaaactatgccaggtggcgctcacgttggttcagaggt
cagcacaggaaacgggagaagactggcgagtattacaagcagatcaaggaatctgttcca
aaagtccttaaaggccaccttcaggagatagaatgcgtggcaacagacgggcagtacatt
atcagtgcctgcctgggcggtcagctgagggtgtgggactcaatcacaggggattgtgtc
acggtcatccacagaaagggagccacaccccctgtgaagaggaaaccttgtttgggaagg
aacatcaatgacagtgatgctgatttatatgcagaataccatggtaatggtagtcatagt
aacagcagtgacccagaggaaggtgactgccaaattgcttaccacagacagaagacagac
agccaagggcttgcaatgcaagggaagaaactcttccagaatcagcccaatctgtcgggt
acaattcacacaaatttcttccaggctcctccttctccagtcagccatacctcccccacc
tccctggatccaccaacactttttaccccgggaagttctcctttatcaagcacttcattg
agtcagttgacttctgactcgtttgattttcagtcacgatttcagcctctttttgacgag
cacactcagtacttgacagagaaccccctggaggaggatgttttcccagatgtaaggtcg
agaagctggagtgctggtgacaaccctctcactactgagcatgatgctgcattgtttgac
tccggctttgaggggaataatgcccccgctatctggtgcctcgcctgctgccagggtttg
atagtcactggctgtggaaacggcaggatagagttttgggaaagcacaagcggcaacttg
aaatatatttatggtgagaaccagactggagttactgccctttgcatagtcaataaaaga
gtggtggcagccagacttgatggttccctagacttcttagaaattgaaacattccataat
cctatttttacatcacccattccgtccacatcatcacatattaaagggcatgtgaggcat
catagtcaacataaagtagttgtcatggagtcactgaagaaatgggaggagatattgcat
gttaccttggtgaaatatgtcaaagctcaccaacagccaatcatgagtctgaaatgtgaa
ggagggcgtgtcatttctgccagtcaggaccactctttaaaggtgtttcgtctggaggac
tgctggtgcttgtacacattgtatggtcatacaacaaaaattacagcgcttcatgctgac
aagtcaccaccatttaacgtggctagcggtgatgcagagggaaccaccagactctgggat
ctccatacaggcacctgcctccacaaggtcaaagttcatgaggctgcagtggtggccttg
acctgtaccattaaatacgttatcagttccggactggatgacagactctgtttgtgggac
agaaagagaggaacactcgttcatgaactggaaatggatccttgtggaaataactgtatg
tcactgttgacctctcaccttttagtgttgggaggtcaaggttatatccaattgattgac
cttgacaaaggtgagatcttaagaagagtgagtgttggatcctcggacaagtcggcattt
gtgaatcagatccatgttgtacagaacacggtgatagtttgcgattatgcaagcgagatg
aaagtgattcagttccccactgtgttagagaagtcagactga
DBGET
integrated database retrieval system
