Ostrea edulis (European flat oyster): 125665724
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Entry
125665724 CDS
T09123
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04512
ECM-receptor interaction
oed04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125665724
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125665724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125665724
Cell adhesion molecules [BR:
oed04515
]
Integrins
Integrin alpha subunits
125665724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
CARDB
DUF11
EphA2_TM
LST1
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
125665724
NCBI-ProteinID:
XP_048754474
LinkDB
All DBs
Position
10:29618886..29680983
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AA seq
1124 aa
AA seq
DB search
MNSERTVSSLALTGRISCLCTWCLKRRMVFGCKRSQVISWMFCSLFFFSPAVYGFNLDTN
TPIFQRGNAGDMFGYSVAQHIDQGQSWMLVGAPRAQTGQPDIVRGGAVFRCRIDPHNQTN
NIPSWCQIIPFDNRGNERRTDPFGISQPIEDKNNQWFGATVISSGESGQILACAPRYVYL
STQFNKREPVGTCYLARSGSTTFEEYSPCRGKKFQDPDVDLLRDTVDQYHKSGYCQAGFS
VAMAANGSRILIGAPGAFYWQGQVYNYWLDLNNNKLSTREEGASEDNKYRGYSSAVGHFD
NDNMEDYVVGIPRAEKLLGVVQLYNQNLQPIKNITGKQIGAYFGYAVAVEDLNGDKLDDI
IVGAPLHSDKDSSSYDTGRVYIYYQDARGGFNSEGSDLRKFRQKKKDILEGYEPKSRFGS
ALTGLSDINRDSYNDLAVGAPYGGIEGRGVVYIYVGSMDGIITEVSQILHGQALGYYLST
FGFSLSGGYDLDKNGYPDLVVGAYESDTAVFVKSRPIVRVAASLRLDPDIIKLEERNKNC
HIGDDTYKIHVPCLIVRTCVEYNGEGVSNELEFDFFWTLDARKNISKRMFQYQTQQPEVS
ELSLKLTKQEVFCHDFIVYILNNIRDKLTPIDVSFSYRLVSDDEVTGRKKRQTAQRTIPP
ILDKYIPSTVTVEGKISKNCGDDERCIPDLSVLAERVEPFAKPIEVGSSNEEIEISITVR
NSGPMAEDSYETMLYVELPEGMLYSGITNTNAAVALTCNYRAINTSPFVICDIGNPMPAR
AKTYFTLLVTPNNTDGLTDKLAFKFNVNSSNPENNTDMWDNVYTMHIEVRQRAFLEISAN
LAVSTEQVIYNATGVNLYKGTGFGPEIIHEYRVRNLGPTPVKSSLVNIYWPSYDDQGNHL
LKIDEGPHVLYPNGGFCEKQLLSPENSTDFTYREGNSKINVQLQTKTRRHTRQKRDTSNV
KNVVCNNQYCTFIKCFLGPMPGRMVDSRDAAVIQIKAHIWTNTLVLRGLTVDPFNLKSQA
LAQVQTMPFNIPVDHNNETFMVSEAEVSTYVNAEKLAPRKKTVEIWKIAVAIVGGLLLLL
IIIIVLWVCGFFRRKRPNGEPSYSKPLMKNGQQPKSDLAARPYE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgagagaactgttagttccttggctttaactggtagaatttcctgtctgtgt
acatggtgcttgaagagaaggatggtgttcggatgtaagaggagccaagtcatatcgtgg
atgttctgttcgttgtttttcttttcccccgctgtctatggatttaatttggataccaat
actccaatttttcaaagaggaaatgcaggggatatgtttggatattctgtggcacaacat
atcgaccaaggccaatcatggatgctagttggagctccccgggcccagacaggacagcct
gacatagtacgaggaggggctgtgtttagatgtagaatagacccacacaatcaaactaat
aatattccatcctggtgtcaaatcattccttttgacaaccgagggaatgagaggcggaca
gatccatttggcattagccagccgattgaggacaaaaataaccagtggtttggtgcgact
gtaatcagttctggggaaagtggacaaatattggcatgtgcccctagatatgtatatctg
tccactcagttcaacaagcgggaacctgtgggtacgtgctacctggcccggtcgggcagc
accacatttgaggaatactcgccttgtagaggaaagaaatttcaagaccctgatgtcgat
ttgctaagagatacagtggaccaataccataagtccggctactgtcaagctggcttctca
gtagccatggcagctaatggcagccgaattttgattggtgcacctggtgcattttactgg
caaggccaggtttacaattactggttggacctgaataacaacaaactgtcaacaagggag
gaaggagcttcagaggataataaatacagggggtactcgtcagctgttggccactttgat
aatgacaacatggaagattatgtagttggcattcccagggcggagaaacttttaggagta
gttcaactttacaatcagaatttgcaacctataaagaacattaccggcaaacagattgga
gcttattttggttatgcagtagcagttgaagacttaaatggtgacaagcttgatgacatc
atcgtgggtgctcctctccattcagacaaggattcctcctcttacgacacgggcagagtt
tatatatattatcaggatgctaggggcggttttaattcagaaggatcagacttaagaaaa
tttcgacaaaagaaaaaggacatcctagagggatatgaaccgaagtcaaggtttgggagt
gctctgacaggactaagtgacatcaaccgggattcttacaatgatttagcagttggcgca
ccttacggaggaatagaggggcggggtgtggtgtacatctatgttggttcgatggacgga
atcattacggaggtttcacaaatcctgcatgggcaagctctcggttactacctctccacg
ttcggtttctccctctctgggggctacgacctggacaaaaatggctacccagatttagtt
gttggagcttatgaatcagatacagctgtttttgtgaaatccaggccaatagtccgggtg
gcagccagcttacgtttggatccagatatcattaaattagaggaaaggaacaaaaactgt
catattggggatgacacatataaaatccatgtcccttgtttgattgtgcggacctgtgtg
gaatacaatggtgaaggagtcagtaatgagctagaatttgactttttctggacactggat
gcgaggaaaaatatttccaaaaggatgtttcaataccagactcagcagccggaggtttca
gaactcagccttaaactgacaaagcaggaggtcttctgtcacgacttcatagtgtatata
ttgaacaacataagagacaagttaactccaatagatgtctccttctcatatcgtctggtt
agtgatgacgaagtcacaggtcggaagaaacgtcagacggcccaaaggacaatacctccg
attctggacaaatacatcccatccacagtcactgtggagggaaaaattagcaaaaattgt
ggagatgatgagcgttgtattcctgacctatcggtcctggctgaaagagtggaaccgttt
gccaagcctatagaagtcggaagttctaatgaagaaatcgagattagcattacagtgaga
aattctggaccaatggcagaggactcgtacgagacaatgctttatgtggaactaccggag
ggaatgttgtacagtggcattaccaatacaaatgctgcagtagctttgacctgcaattac
agggccatcaacacatctccgtttgttatctgcgacataggaaatccaatgccagcccga
gccaagacttatttcactctgctggtaactcctaacaatacagatggattgacggacaag
ctagcattcaaattcaatgtcaacagttcaaacccagagaacaacacagatatgtgggac
aatgtgtatacgatgcacatagaggtcaggcagcgtgcgtttctggagatttctgcaaat
ttagctgtttcaactgagcaggttatctacaacgccactggtgtgaatttgtacaaaggc
acaggatttggtccagaaatcattcacgagtacagggtgagaaatcttggaccaacacca
gtaaagagtagtctagtcaacatttactggccgagctacgacgaccaggggaatcatctt
cttaaaatagacgaagggccgcatgtgctgtatcccaatgggggtttctgtgaaaaacag
ctcctgtctccggagaattccacggatttcacataccgagagggcaacagcaaaataaac
gttcagctgcagactaagactagaagacatacccgacagaaacgggatacgtccaacgtt
aaaaacgtggtctgcaacaaccagtactgtacatttatcaaatgtttcttgggtccaatg
cctggccgaatggtggattctagagacgcggctgtcatacaaatcaaggctcacatttgg
accaacactcttgttttacgaggtctcacagtagatccattcaatctgaaatcacaagcc
ctcgcacaagtccaaaccatgccctttaatattccagtggatcacaacaacgaaacattc
atggtgtcagaggcagaggtttccacatatgtcaatgcggagaagttggcacccagaaag
aaaactgtggagatctggaagatagcagttgccattgtggggggtctgttgttactgctg
ataataatcatcgtcctttgggtgtgtggatttttccgaagaaagcgacccaatggcgaa
ccatcttattccaaaccgttaatgaagaatggacaacagcctaaatcagacctcgctgcc
cggccttatgagtga
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integrated database retrieval system
