Ostrea edulis (European flat oyster): 125666033
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Entry
125666033 CDS
T09123
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03430
Mismatch repair
oed03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125666033
03460 Fanconi anemia pathway
125666033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oed03400
]
125666033
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125666033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
125666033
NCBI-ProteinID:
XP_048755087
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Position
10:38998344..39120155
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AA seq
695 aa
AA seq
DB search
MATASGTIRRLDEVVVNRIAAGEVIQRPANALKEMIENSLDAKSSNIQVTVKQGGLKLLQ
IQDNGTGIRKEDMEIVCERFTTSKLQKFEDLNSIATYGFRGEALASISHVAHVTITTKTA
DSKCAFKGNYVDGKLKEAVKPCAGNVGTQITVEDLFYNISTRRKALKSPSEEHAKVAEVV
SRYAVHNCSVGFTLKKQGENTTDIRTQSKSTHVDNIRTIYGPSVAKELLEIQHKDEKLSF
KCHGYVSNANYSMKKCIFLLFINHRLVDSSSLRKAVDSVFQAYLPKNMHPFAYLSLEIAP
QNVDVNVHPTKHEVHFLHEEAIISSIQSAVEAKLLGANTSRTYYTQALLPGAPISLDSKD
EDSKSSKSCGGPEKTYAHHMVRTDSKEQKLEAFIKPVNSTDLTEILKNATHPDNAPAKTS
TDGDVMVLPSCGAQQKRRPVKLTSVLTLQEEIKENLHKNLREMFQFHKFVGCVNEEFSLM
QHQTKLYLVNTTKLSRELFYQLMVFDFGNFGLLRLSEPAPIYDLAMLALDLEESGWTEAD
GPKHDLAQYIVDFLKTKSEMLTDYFSIEIDQDGNVCTLPLLLDNYVPNMEGLPMYLLRLA
TEVDWDTEKGCFHTFCRETSEFYCFKPSLFQDQKKDSTDPQEEESGSKKSWKWVVEHVLF
SAFRNLLFPPKTFAEDSSILQIANLPDLYKVFERC
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcttcaggcactatcagacggctggacgaagtggtggtcaatcgtatagca
gctggggaggtcattcagcgtccggccaatgctctcaaggaaatgattgaaaacagtctg
gatgccaagtcctcaaacatccaggtgactgtgaagcagggtggactaaagctactccaa
attcaagacaacggaacagggatcaggaaagaagatatggagattgtttgtgaaagattt
acaaccagtaaactccagaagtttgaggatcttaactccattgccacctatggatttcgt
ggagaagccctggcgagcattagtcatgtggcacatgtaaccataacaaccaaaactgcg
gattcaaaatgtgccttcaaagggaactatgtagatgggaaattgaaggaagcagtgaaa
ccttgtgctggaaatgtggggactcaaattactgtagaagatttgttttacaacatatcc
accaggaggaaggctttaaagagtccatccgaggagcatgccaaggtcgcggaggtcgtc
agcaggtatgcagttcataattgcagtgttggatttaccctgaaaaagcaaggggagaac
actaccgacatccgaacacaatcgaaatctacccacgtggacaacataagaactatatat
ggaccaagtgttgccaaagaactactagaaattcaacacaaggatgagaaattatccttc
aagtgtcatggttatgtgagcaatgctaattactcaatgaagaagtgtatcttcctgctg
tttattaaccatcgcttggtagattcttcatctctacgtaaagctgtggactcagtcttc
caggcatatcttcctaaaaacatgcatccctttgcgtatcttagtttggagattgctcct
caaaatgtggacgtcaatgtccaccctacgaagcacgaagtacacttcctccacgaagag
gcgattatttccagcattcagtccgctgtggaggccaaacttctaggtgccaacacaagc
aggacgtactatacgcaggcattgttaccaggagcacccatatctctagacagcaaagac
gaggattcaaagtcatctaaatcatgtggaggcccagaaaaaacatatgcacaccacatg
gtgaggacagacagtaaggaacagaagctggaggccttcatcaagccggtcaactccaca
gatctgacggagatcctcaaaaacgccacccatcctgacaacgctccagcaaaaacctcc
actgacggtgacgtgatggtgttacccagttgtggagcccagcagaagaggaggcctgtg
aagctcaccagtgtattaacacttcaggaagagatcaaagaaaacctgcataaaaatctg
agagaaatgttccaatttcacaaatttgtgggctgtgtcaatgaagagttttccttgatg
caacaccagacaaaactgtacttggttaacacgaccaaattaagccgtgaacttttctac
cagctgatggtatttgactttggaaactttggactactgcggctttcagagccagccccc
atatatgaccttgccatgcttgcccttgacctagaagagagtggatggactgaggcagat
ggacccaaacacgaccttgctcaatatattgttgattttttgaaaacgaaatctgagatg
ttaaccgattacttcagtatagaaattgaccaggatggtaatgtgtgcacgctgcctttg
ttgttggataactatgttcccaacatggaggggcttcccatgtacctcctgaggctggct
acagaggtggattgggacacggagaaggggtgttttcacacgttctgtagggagaccagt
gagttctactgcttcaagcccagcttatttcaggaccagaaaaaagactcaacagatcca
caggaagaagaaagcggatccaaaaaatcatggaaatgggttgtggaacatgttttattt
agtgcattccggaaccttttgttcccacccaagacttttgcggaggattccagtatttta
cagattgccaatttacctgatttatacaaagtatttgaaagatgttaa
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