Ostrea edulis (European flat oyster): 125666495
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Entry
125666495 CDS
T09123
Name
(RefSeq) integrin alpha-2-like isoform X1
KO
K06483
integrin alpha 4
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04512
ECM-receptor interaction
oed04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125666495
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125666495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
125666495
04515 Cell adhesion molecules [BR:
oed04515
]
125666495
04090 CD molecules [BR:
oed04090
]
125666495
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125666495
Exosomal proteins of other cancer cells
125666495
Cell adhesion molecules [BR:
oed04515
]
Integrins
Integrin alpha subunits
125666495
CD molecules [BR:
oed04090
]
Proteins
125666495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Psg1
TMEM154
Motif
Other DBs
NCBI-GeneID:
125666495
NCBI-ProteinID:
XP_048755596
LinkDB
All DBs
Position
10:1596128..1689089
Genome browser
AA seq
1232 aa
AA seq
DB search
MWRRETWLLIFLCIPVISGFNVGIKGAKILSGTAGSMLGYSLDFATKGNNVWLLIGSPKS
VDVDTSVATGSLYYCGSGINTLSDCRQISVTRLVTVNPGTNFMENRAEMWLGASVDVGNA
VSFCGPRWMRDSTDGNVRAMNGLCYEVPFGFLEGDPFTSPVVMNGLFNSDPTQQFTAVDE
AKFNQTLRYGVSASGLSIKYSGEDVLVGSPGVNEFAGGFVHVKGIGYTVQDQNTTAANQA
QMYGYAVSVGQFYGDGQSYFVVGGPRDGGSGKVLILNSAYAVKQTLGGIEPGSYFGSALC
VVPEKGGTMEKLLVGAPMYSNMQTYSDYYSSNAEQGRVYVYGKSQTNGMLEVKQTLEGSK
SRGARFGYAMANVNDMNRDGYNDVVIGAPFENGGQGAVYVYMGYKRGFFLTQTISAASVA
PSGTSLSTFGSSFTQHPADFNNDAHTDLAVGAYGSDKAFVLYTNRPITMKVDTKTNLTAQ
AGQQKATIITLNTKAFTLQVCFDYDGENIPSDVVVSYEVTADTAFQSSSSSSLSRVCFKK
SETQCVNKISGNFTIFKAPPDLTCPKSPLQVVVKDDWSAMRGLFVPVVFDVGFTVSTTGN
TECTIGCPVVNKFDPNNDDPFAATRKYSYELARSGCGTDNICQSDLRLFVTSSGNEIITG
PQAEYTLTVMIKNQAEPSYNTDIYFTFQSNMTLSVYENLNQNFLVSCSPDVGSVKCSTDK
SQFKKDEDINFRIKLDSSRLLPLIDSFLMKVEVKTGSNDLSLQDNVYTETVQVLTRVEAV
YNLAASPEVYITKPAAESPTIGVVHSVQMVNAGPSNLMDTLNFTLTYPQSSQVKPQKIIL
NVSSADDSTLIRCQNLALTPEGITNSTYRAFTIPFDLAGNSVSATKFDCNTGGTCKMVVC
EIGTFMYDSFISVDVSYEVEQNLYDIINGQTGNVIPDVPIVTVFTPGVAKATVSLIPKGN
GVVITKILPSKPVEEEVPVWAIVVPIVIAVIILIVIVIVLWKRGFFIRKYKVRVAERKAG
KDKSDDKEDFDNLVEPQTPIGQVVYENEGSPVMSSFTAEKTPAETTPAETTDSPEEKKPE
ADDLEDLKLELTKGEPDWGGLDELMADLNLKAGRDVESGPVVEPPNVKPTGGDYADVEED
AEPVVKASVKPTGGDYDDIEDDEETGLLSKEDEPASPKPEEPAEGDIPDYAKIDKSRKSS
QKEPLLSESTKSEGDSIPDYAVVDKSRKTDNS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaagagaaacatggcttcttatatttttgtgtatccctgtgatatctggattt
aatgtcggaattaaaggggccaagattttgagcggaacagctgggtccatgcttgggtac
tcgctggatttcgccacgaagggcaacaatgtgtggttgttgattggatccccgaagtct
gtggatgtagacacaagtgtggccaccgggagtctgtattactgcgggagtggaattaac
acgctgtctgactgtcgccaaatctctgtcacacgacttgtcacagtgaatccaggcaca
aatttcatggagaatcgtgcggagatgtggctgggtgcctcagttgatgtggggaatgct
gtatcgttctgcggaccccgttggatgagagacagcacggatggaaacgtccgtgcaatg
aacggtttgtgttacgaggtgccctttggatttttagagggagatccatttacatctcct
gttgtaatgaatggactgttcaattctgacccgactcagcagtttacggcggttgatgag
gcgaagtttaaccagaccttgagatatggagtgtctgcttcaggcttgtccattaaatat
tctggtgaagatgttcttgtaggttcaccaggtgtgaatgagttcgcaggtggttttgtc
cacgtgaaaggcataggctatactgttcaggatcagaatacgacagcagccaatcaagcg
cagatgtatggttacgctgtgagcgttggtcagttttacggtgatggacaatcctatttt
gttgttggcggccccagggatggtggctcgggcaaagtactgatcctgaattcagcttac
gctgtcaaacagacactgggaggaatcgagccggggagttactttgggtccgccctgtgt
gtggtcccagaaaaaggtggcacgatggagaaactccttgttggagccccgatgtacagc
aatatgcagacatactctgattactacagcagcaacgcggaacagggacgggtgtacgtg
tacgggaaaagtcagacgaatgggatgctggaggtgaagcagacactggaaggttccaag
tcgaggggtgccaggtttggttacgccatggccaatgttaacgacatgaatcgggatggc
tacaatgatgtggtgatcggggcacctttcgagaacggtggacagggagcagtttatgta
tacatggggtacaagaggggttttttcctgacacagacgatatctgcagccagtgttgcc
ccctcgggaacctctttatccacctttggcagctcatttactcagcatcctgcggacttc
aacaacgatgctcacacagatctggctgtgggcgcctatggttcagacaaggcctttgtg
ctgtacacaaaccgaccaatcactatgaaggttgacactaagaccaatctgactgcccag
gccggacagcaaaaggccaccatcattacgttaaacacgaaagcattcacactgcaggtg
tgcttcgattacgatggagaaaatattccttctgatgtcgtggtgtcctatgaggtgacg
gcggacaccgccttccagtcgagcagcagttccagcttgtctcgtgtctgcttcaaaaag
tcggaaacgcagtgtgtcaacaaaatatcgggaaacttcaccatattcaaagctccccca
gatcttacgtgtccaaaatctccattacaagtcgtggtcaaggatgactggagtgccatg
agggggttatttgtgccggtcgtgttcgatgtgggattcactgtgtcaacaactgggaac
accgagtgcaccataggatgtcccgtcgtcaacaagtttgatcccaacaacgatgacccg
tttgctgcaacacgtaaatattcctatgaactagccagaagtgggtgtggcacggataat
atatgtcaatcggatctcagactttttgttacgtcctcgggaaacgaaatcatcacagga
ccacaagcagaatacacattgaccgtcatgatcaaaaatcaggcggagccgtcgtacaat
acggatatctacttcaccttccagtccaacatgacactgtctgtgtacgaaaatctcaac
cagaatttcctcgtcagttgttcgccggatgtggggtccgtgaagtgctctactgataag
tcgcagttcaagaaagatgaggacatcaatttccggatcaagctggacagtagtcggctg
ttaccgttgattgactcgtttttaatgaaagtggaggtgaaaaccggcagtaacgatctc
agcctgcaggacaatgtctacaccgagactgtgcaagtactgacgcgagtcgaagctgtc
tacaatcttgctgccagccccgaggtttatataactaagcccgccgcagagagccctact
attggagtggttcacagtgtgcagatggtgaatgcaggaccgagtaacctgatggacacc
ctcaactttactctgacctacccacagtccagtcaagtcaagccacagaaaattatttta
aacgtctcgtccgctgatgacagtactctgatacgatgccagaatctcgccctgacacca
gagggcatcacaaattcgacgtacagagccttcacgattccttttgacctggcaggaaat
tccgtgtcagccaccaaatttgattgtaacacgggcggaacttgtaagatggtggtatgt
gaaattggcacgtttatgtacgacagttttatctcggtggacgttagttacgaagtggaa
cagaatctttatgacatcatcaacggccaaactgggaatgttatacctgatgttcccata
gtaactgtgtttacaccaggggtggcaaaggcaacagtgtcattgattcctaaaggaaat
ggggtggtgattaccaaaatactgcccagcaagccggtggaagaggaagtaccagtgtgg
gccattgttgtacctatagtcatcgctgttatcatcctcatagtcatcgtcatcgtcctg
tggaagagaggatttttcataagaaaatataaagtccgggtagcagagaggaaagcaggg
aaggacaaatcggacgacaaggaggactttgacaatctggtcgaaccgcagacaccaatt
ggacaagtggtgtatgaaaacgaaggaagcccagtaatgtcctcattcacagcggaaaaa
acgccagcagaaacaacaccagcggaaacgaccgactccccagaagagaagaagccggag
gcagacgatttggaggacctgaaattagaacttactaaaggtgaaccagattggggtggg
ttagatgagctaatggcagatttaaatcttaaggcaggtcgtgatgtagaatccggacca
gtggtggaaccccctaatgttaaaccgactggtggggactatgctgatgtggaggaggat
gctgagccagttgtaaaagcgtcagttaaaccgacaggcggggactatgatgacatagaa
gatgatgaagaaacgggtttgctttctaaagaagacgaacctgctagtccgaaaccagag
gaacctgctgaaggagacattcccgattatgctaaaattgataaatctaggaaaagctcg
cagaaagagccacttttatccgaatcaacaaaatccgagggggatagtatccctgattat
gctgtagtagataaatcaaggaaaacagacaattcctga
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