Ostrea edulis (European flat oyster): 125666599
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Entry
125666599 CDS
T09123
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125666599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125666599
03036 Chromosome and associated proteins [BR:
oed03036
]
125666599
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125666599
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125666599
PBAF complex
125666599
GBAF(ncBAF) complex
125666599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125666599
NCBI-ProteinID:
XP_056007634
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All DBs
Position
10:4135132..4157378
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AA seq
554 aa
AA seq
DB search
MIQPQHGQHRFPQPGPPVRPFQQPGYPGGPPRPGGYGPGPQMGQSGPRMMSHGPMPPHPY
AGGSPSSKSARSEKSKESSARDKVKDVGAMRPGMPPPPHGMPTPHGMDRKRPPDPRGTPQ
QMKQAAKKKKKVADKILPQRVRDLVPESQAYMDLLAFERKLDATIMRKRLDIQEALKRPM
KQKRKLRIFISNTFYPAKSEGEDGDETVASWELRVEGRLLEDAASAKLNDTSKMKRKFSS
FFKSLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDQNVKCTVLLMLDYQPPQF
KLDSRLARILGVHTQTRPVIINALWQYIKTHSLQDHHEREYINCDKYLEQIFECKRMKFA
EIPGKLHSLLMPPDPIVINHVITVEGPDARKTACYDIDVEVDDTLKQQMNSFLLSTASQH
DIGSLDSKIHETVETINQLKTNREFFLSFAKDPQEFINNWLISQSRDLKTMTDVVGNPEE
ERRADYYYQPWSQEAVCRYFYGKVCVGIVLAQKWNPKIYTYRLELSITILGLQLVSVLFL
KVLKSLNRSLIDSQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaccacagcatggtcaacatagatttccccaaccaggtcccccagtaaggccc
tttcaacagccgggttatcctgggggaccacccagaccagggggttatggaccaggacca
cagatgggacaatccggtcctaggatgatgagccatggaccaatgccaccacacccatat
gcaggaggatcccccagttccaaaagtgctcgatctgaaaaatccaaggagagctcggct
cgcgataaagttaaagacgtgggtgctatgcgacccggcatgcctccgccgcctcatggg
atgccaaccccccacggaatggacagaaagagaccgccagacccaaggggcaccccccaa
caaatgaaacaggcagcgaagaagaagaaaaaagtagcagacaagattcttcctcagagg
gtgagggatctggtcccagagtcccaggcatatatggatttgctggcttttgagaggaaa
ttagatgcgactatcatgaggaaacgactggacatacaggaggctctcaaacgacccatg
aagcaaaagaggaaattaagaatctttatctccaatacgttttaccctgccaaatctgag
ggtgaggatggggatgagactgttgcatcatgggaactgagagtggaagggagactactg
gaagatgcagccagtgccaagctgaatgacaccagtaagatgaaaagaaagttttcctcc
tttttcaagagtttagtgattgagctagacaaagaactgtatggcccagataaccacctg
gtagagtggcaccggactcccacaactcaggaaacagatggtttccaagtcaaacgtcca
ggagaccagaatgtcaaatgcacagtcctgttaatgcttgattatcagcctccccagttt
aagttggactcccggctggcccgtatcttgggagttcatacacagacgcgaccggtcatc
atcaacgctctatggcagtacatcaaaacacacagtcttcaggatcatcatgaacgcgag
tacatcaactgtgacaagtatttagaacagatttttgagtgcaagagaatgaagtttgcg
gagattcccgggaaacttcacagtttattgatgcctccagacccaatagtcatcaaccat
gttatcacggtcgaggggcctgatgccaggaaaactgcatgttatgacattgatgtagaa
gtggatgacaccctgaaacaacagatgaattccttccttctgtctacagcgagtcagcac
gacatcggatcactagattctaagattcacgaaaccgtggaaacgataaaccagctgaaa
accaacagggaattcttcctgagttttgcaaaggatcctcaagaattcataaacaactgg
ctgatctcgcagtcacgggacctcaagacaatgactgacgttgtggggaacccggaggag
gagagacgggctgactactactaccagccctggtcccaggaggccgtctgtcgctatttc
tatggcaaggtgtgtgtcgggattgtactagctcagaaatggaatccaaagatatataca
tacagattagagctttcaatcacaatccttggtcttcaattagtttcagttttattctta
aaagtattgaaatctttgaataggtccctaatcgacagtcaataa
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