Ostrea edulis (European flat oyster): 125666609
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Entry
125666609 CDS
T09123
Name
(RefSeq) rotatin-like isoform X1
KO
K16484
rotatin
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oed03037
]
125666609
Cilium and associated proteins [BR:
oed03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125666609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
DUF383
TPR_Trm732_C
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
125666609
NCBI-ProteinID:
XP_056009231
LinkDB
All DBs
Position
1:complement(108882666..108916926)
Genome browser
AA seq
2236 aa
AA seq
DB search
MAMQTRQDINFQGIFKKLGHNLDEIRVRSLENLLSKLEHNLVCDSDLINERHLMIRLIEW
FNFPSPPKQGEVLHLIQRLSKHSATAQILQDIGAIEFLSQLRADVSKSLQPVIDEILENT
MRLPEVPEETYAPTCVYQKQGYIPESKALATSDVASEMDPLHSSVSSVLPQESTGQPHII
TGREITDGYFKDKVHVIQEQQRENTDGTSNTFLVTTFPWLALTPTDRHVIQSTNSSLQSR
ESHLLASSCEFLSDVVFQDFPSEIFLQRPNIVRNLLALLGAVPNVNTHLTIHAAKTLGHL
TSSLRSRLRYYQDPALFTSKQDFSSASSSPFSNSPSVLSNQSGRSDGHSPRTGWGDTRPR
GDGREVDSSSSVSSNSRNSSVSVGPEVTNPEETDIDDMRSLQSMQITLPQYCSLVIEKAV
PLLKTETEGVVTQLMYLLNQVLEIFNGIVTMEIWQDTSSRAREIAERICGTFEALSDVIN
YHHHGDVNRGNTSHEKEKGDIVQHRLAFIGVTGFTARLLRQLVPLQQGRKLLPSSLIKSM
ELVVFDEALSHSYPSIQITLLAYLQILSPDKYKLFVDTAKISQSIQKSCQFLMLCQEEGY
KGSSELINMAETSLQSLPYHIHLPLVTEFVKLSSSICARTTEERALQTKCMDILLKFLSH
PLPQVKEQTYSTIKQVVKGSLNVNEAADPSSRACYLSRFLFNSDVMYQVIVFGLIDDNSK
VSQMGTEIICHILDGQLLMTEDLWKEAQTSLMRSLPVLQTYVDLGTKLGSSLLAMTDPTE
GQTEGGLVYLEKLRGCIRMMFSTDIRTRAEALKRLAWFLSNERDSNEKLPIFASLDVTNL
TSIFVVELQRSLDEDLGRSVFQIDGLRKVYEIFNSSSVDPSVKKSAVDQLAIILQDHNLH
APFKAEGGVETILKHLKLGLVRNDNVQSENLHYLPACAAILRSLVHYDYRLRHKFARDQE
MYLILLRVAFLHQRDERTCYEVAHILTLLLFDEVAKFDLGGGTSPVVHFSVPSVLRKRCR
LPFRPVCHHDNSPHEVELPPDPDPIQTERSLEMLRVCWNVSWHGGMEKLQKYLARNNSTS
KSDLFSEFSPRLQLSCIEKKIVQCSHLSEGIKQTLYNICNATSHNAVRSALSQLLSYLVN
SYGYEGSEVMFDQEWLSSIGRFLKVHPSMPDDESLLQEVLGFISMALRLTSDVSEGTLQA
LGEALYQPTGPLIGLSHRTSVRGETRDVPENVNIKRTLDKELLSFISNYNCKLPYVLCRR
LKFQQLRGDLCHQLLQRLNVTDAPHFYNLASLEGTLLCLMHITARPGWSTESTELECGTL
CNQLLGCLLEVVSAFHIGRGGTSMSYMGKGVTKAATLCLRHLAYEMSTAVGNKKWAEQWM
YVQQRADGQNSTEREGEHGLDWLLTLWFYRDPEVRVAGLGIGVALTSTEIGRTVVTSNCK
HIPGGVWGMAFSILLDQLECSMVRQQAALLLVNMTSQSMPCESVELEQNLWQGPIVTDTE
SKVSLVGLTALLALLHHSHFYQEMLMVFTNFYAQPVIQQISAAEVMLSSQLSSASSESTM
STTADLTSVSQQGQQFWSRGGTDAWGSLKASTRNVQTVQQADSSGSTLMAGDGGSDIISV
ATPSLVASISQLLRNLVILAPQDTFTCLKQDSFVQILTNMVDTNLLEAYMLEMEGNVNYD
QYEVVFGDLLEMYRSVISLLTACVVYDTPTRQEILANKDFIISALALMTIRFQGSSDVES
KLQELWGAVLSFFVINLQLQGASTLAVVTESIPKIWGSFSENMCNIITKRLDYDHELFSK
CLQFLSILFSEEGKLQGRQPDLSVCSIRELLDSGTGNDEKCENSPGYHLCKSLIPVYEQS
VVRSSDHRSMERLHAASALRNLLAVSQSAKSVALEIGFVETTIENIKQLHSKMNLEALQL
GKSTAKKKEDSLVQDLIITFDVLRNLLFMNEDAKMACYHSCLPSVIHKIWPWCQMEPQLM
LSTVSLLSTYAAKCLTATSSLAYTSPSSTSTTQNVRSTSQQLGTNSIIHCLLKLAGKEGI
REPLLKALYGLLATLCLSSECRNIMFKSNFFKEFTELNPKKKKKNKQHKNLETYWLELMV
NLSFSTEGQQMILKTGDSVDLLLDFVDCGNGVTLEYSVLIIRNMCCHCSSKPKLLANDKL
LPLLLSCLNKDSVKVQTIAASAFLGLVFNNQKAKVMMKNANLLPKLQETLSNLNNMRMTP
EKCVQDLMSVVLAVSE
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaaacaagacaagatataaattttcaaggcattttcaaaaagctaggtcat
aacttggatgaaatccgtgtcagaagtctagaaaacctactttcaaagcttgaacacaat
ttagtttgtgactcagacttgattaatgagcgccacttgatgattagactaatagaatgg
ttcaatttccccagtccaccaaaacaaggagaagtgttgcatcttatccagagattatca
aagcattctgcaactgctcaaattctccaagacattggtgctattgaatttttgagtcag
cttcgagctgatgtttccaagtctcttcagcctgtaattgatgaaatcctggaaaacaca
atgagattgccagaagtgcctgaggaaacctatgctccaacgtgtgtttaccagaaacaa
ggctacattcccgaatctaaagcgcttgcaaccagtgatgtagcatctgaaatggatcca
ttacattcatcagtctcgtctgttttgcctcaggaaagcacaggccaaccacatattata
acaggaagagaaatcactgatgggtatttcaaagacaaagtacatgtaattcaagagcag
caaagggagaatactgatggtacctcaaacacattccttgtgacaacatttccttggttg
gccctgactcctactgacagacatgttatacagtctacaaactcctctttacaaagtaga
gaatctcatttattggccagttcctgtgaatttttgagtgatgttgtatttcaagacttt
ccatctgagatatttttacagaggccgaatattgttagaaatctgctagcacttttagga
gctgttcccaatgttaacacacatttgaccattcatgcagccaaaactttaggtcacctg
acctcctctttaaggtcaagattacgatattatcaagatccagcattattcacttccaaa
caagatttcagttcagcttcttcttcaccattttctaactccccgagtgtgttgtctaac
cagtcagggaggtcggatggccacagtccacggactggttggggggacactcgaccccgt
ggagatgggcgggaggtggactcctcctcatctgtcagttccaactccaggaactctagt
gtcagtgtagggcctgaggtgacaaaccctgaggagaccgacattgatgatatgaggtcc
cttcagagcatgcagatcactctccctcagtactgctccctggtcatcgagaaagcagtg
ccccttctgaagacagagacagaaggtgttgtcactcagctaatgtacctcctgaaccag
gtcctagagatctttaatggtattgttaccatggagatatggcaggatacctcatccagg
gcgagggaaattgctgagagaatatgtggaacatttgaggctcttagtgatgtaattaat
tatcatcaccatggtgatgtcaaccgtgggaatacaagccatgaaaaggagaagggagat
attgtgcaacacaggttggccttcattggggtgacaggatttactgcaaggcttctgagg
cagctagttcctttgcaacaagggaggaaacttttgccctccagtctgatcaagtctatg
gagttggtggtgtttgatgaggctttgtctcatagttatccaagcatacagatcacactc
ctggcctatttacagatcctcagtccagacaagtataaactgttcgtggacactgccaaa
atatcacagtccatccaaaagtcatgtcaatttttgatgctttgtcaggaggagggatac
aaaggaagcagtgaattgatcaacatggcggagacttctctacagagtctaccataccac
atacacctcccgctggttacggagtttgtcaaactctcgtcctcgatatgtgctagaaca
actgaagagagagctctgcagacaaaatgtatggacatcttgctgaagttcttgtcccat
cctctccctcaggtcaaagaacaaacctacagtaccatcaaacaggttgtcaagggttcc
ttgaatgttaatgaggcagctgaccccagttccagggcctgttacctctccagattcctg
tttaactctgatgtcatgtatcaagtcattgtctttggcctcattgacgataattccaag
gtaagccaaatgggcacagagatcatatgtcacatcctagatggtcagctgttgatgaca
gaggatttatggaaggaggcacagactagtctaatgagatcacttcctgtcttacagacc
tatgttgacttggggaccaaacttggctcctccttgctggcaatgacagatcctacagag
ggccagacagagggagggctagtgtacttagagaaattgaggggctgtattagaatgatg
ttttcgactgacatcagaacaagagctgaagctttgaagcggctggcctggttcttgtca
aacgaacgagacagtaatgaaaaactgcccatctttgcctccttggatgtaacaaatttg
accagtattttcgttgtggagttacagaggtctctggatgaagacctcggtagatcagtg
ttccagattgatggcctaaggaaggtgtatgaaatctttaactcctcatcggttgatccc
tctgtgaaaaagtctgctgtcgaccagttagccatcattttacaagatcacaatcttcat
gccccgttcaaagcagaaggaggggtagaaaccatcctcaaacacttaaagctgggactg
gtcagaaatgataatgtgcagagtgagaacttacattacctgccagcatgtgcagccatc
ttgagatcccttgttcactatgactacagactgagacacaaatttgctcgagatcaggaa
atgtatctcatacttctcagagttgctttcctacatcagagagatgagagaacctgctat
gaagtagctcatattttgacattgttgttgtttgatgaagtggcaaagtttgacctcggt
ggtggaacaagcccagtagttcatttttctgtgccaagtgtgttgagaaaaaggtgtcgt
ttaccattccgtccagtgtgtcaccatgacaacagtccccatgaagtggagttgccccct
gatcctgaccccatacagacagagagatcattagaaatgctccgagtctgctggaatgtt
tcctggcacggtggaatggagaaactgcagaagtatttagccagaaataacagtaccagt
aaaagtgacctattcagcgagttttctcctcggctacaactgagttgtatagagaaaaaa
attgttcaatgcagtcacttatctgagggaatcaaacagaccctgtacaacatctgtaat
gccacttcccacaatgctgtgaggtcagcacttagccagttgcttagttacttggtaaac
tcctatggttatgaagggtcggaggtcatgttcgatcaagagtggctatccagtattgga
aggtttctgaaggtccatccatcaatgccagatgatgaatctctactgcaagaagttctt
ggttttatcagtatggctctgaggttaaccagtgacgtgtcggagggcaccctccaggcc
ctgggggaggctctatatcagccaacaggacctctgattggcctgtcccataggacatca
gtcagaggagagaccagggatgtcccagaaaatgttaacattaaaaggaccctggacaaa
gagctgttgtccttcatctctaactacaactgtaaactcccctacgtcctgtgcagaaga
ctaaagtttcagcagcttcgaggggacctttgtcatcagttactgcagcgcctaaatgtc
acagatgcccctcatttctataatctggcttcacttgagggaactcttctgtgtctcatg
cacatcactgccagaccgggatggagcacagagagcacagaactggagtgtggtacactg
tgtaatcaactactgggctgtctgttagaggttgtgtcggctttccacatcgggcgcgga
gggacatccatgtcctacatggggaagggggtcacgaaggcagccaccctgtgtctccga
catctagcttatgaaatgtccacagcagttggaaacaagaaatgggctgagcagtggatg
tatgtgcagcagagggcggatggacagaacagcacagagagagagggagagcatggcctt
gactggttactgaccctatggttttacagggatcctgaggtgagagtcgctggattggga
attggagtagccttgacctcaacagagattggaaggacagtggtgacttcaaattgtaaa
cacattccaggtggtgtctggggcatggccttcagtattctcctggaccaattagaatgc
agcatggttcgccaacaggcagcattgctgttggtcaatatgacatcacaatccatgcca
tgtgaaagtgtggaattggaacagaatttgtggcagggacccatagtcacagataccgag
tccaaggtgtctctcgtaggactgacagcactcttggcgttactccaccacagtcatttc
tatcaagagatgctgatggtgttcaccaacttctatgctcagccagtcatacagcagatc
tcggctgcagaggtgatgctgtcatcacaactgtcctccgctagctcagaatctaccatg
tctactacagctgatttgacttcagtcagtcagcagggtcagcaattctggagccgagga
ggaacagatgcttgggggagtttgaaagcaagcacaaggaatgtccagactgtgcaacag
gcagacagttctggcagtactctgatggctggggatggaggaagtgacatcattagtgta
gccacaccctcactagtggcctccatttcgcaactattacgcaacctggtcattctagca
cctcaagacacattcacttgtctcaaacaagactcctttgtgcaaatcctgacaaatatg
gtggacaccaacttattggaggcgtacatgttggagatggaggggaacgttaactatgat
cagtacgaggtggtgtttggggacctcctggagatgtaccggtccgtgatctcactcctc
acggcctgtgttgtatatgacactcccactagacaggaaatcctcgcaaacaaagacttc
atcatatctgccctagctctgatgactattagattccaaggttcatcagatgtggaatca
aagcttcaggaactgtggggggcagttttgtctttctttgtcataaacttacaactccaa
ggagcttcaactcttgcagtggtgacagaatccatacccaaaatatggggctctttttct
gaaaatatgtgtaacatcattacaaagcgactggactatgatcatgagttattctccaaa
tgtctgcagtttctctccatattgttcagtgaagagggaaaacttcaggggagacaacct
gatctctctgtctgttcaatcagagagcttctggattctggcacaggaaatgatgagaaa
tgtgaaaatagtcctggctaccatctgtgtaagtccctcataccagtgtatgagcagtca
gtagtacgctcctctgatcaccgaagcatggagaggcttcatgctgcatcagcgcttaga
aacctcctggctgtcagtcaaagtgccaaatctgttgctttggaaattggctttgtggag
accacaatagaaaatatcaaacagctgcattccaaaatgaatcttgaagccctgcaattg
ggaaaatctactgcaaaaaagaaagaagactcactagtccaggacctcatcatcacattt
gatgttctgagaaatctcctgtttatgaatgaagatgccaaaatggcttgctaccattca
tgtctgcctagtgtaattcacaaaatttggccgtggtgtcaaatggagccacaactaatg
ctttctaccgtttcactgttatctacttatgctgccaaatgtcttactgccacaagttct
ttggcatacacctctccatcctctacatccaccacacaaaatgtgagatccacctcccag
cagttgggcactaactccatcatccactgtcttctgaagttggcaggcaaagagggcatc
agagagccactattgaaggctttgtatggactattggccacactctgtctgtcatctgag
tgcagaaatatcatgttcaagagcaacttcttcaaagaatttacggagctaaatccaaag
aaaaagaagaaaaataaacagcataagaacctagaaacctactggttggaactgatggtc
aatctgtctttctccactgagggccagcaaatgattctgaaaactggggactcagtggac
ctgttgctggactttgtggactgtgggaatggagtcacattggaatactcagtgctgatc
atcaggaacatgtgctgtcactgcagtagcaaaccaaaactattggcaaacgacaaactt
ttgcctctccttctgtcatgcttgaacaaggattctgtaaaggttcagacaatagcagcc
tcagcttttctgggcctcgtgtttaataaccaaaaggcaaaagtcatgatgaaaaacgca
aatctattacctaaacttcaagaaactttatccaatctcaacaatatgcgaatgacacca
gaaaaatgtgtgcaagatttgatgtcggtcgttttagctgtatcagagtga
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integrated database retrieval system
