Ostrea edulis (European flat oyster): 125667060
Help
Entry
125667060 CDS
T09123
Name
(RefSeq) DDB1- and CUL4-associated factor 11-like isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125667060
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125667060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WD40_RFWD3
WDR90_beta-prop_4th
Cytochrom_D1
PD40
Beta-prop_RIG_1st
YunG
PmrD
Motif
Other DBs
NCBI-GeneID:
125667060
NCBI-ProteinID:
XP_056009200
LinkDB
All DBs
Position
1:107514017..107540628
Genome browser
AA seq
560 aa
AA seq
DB search
MENDEEVFPLDIRYDFMGAHNSTSQPRMSVSESDTRQTTSDNEESPDLQAILAFLIRSGQ
VRILTNDEDDVDSKESDSDGCEFYGPARPPQEDPHPNTAELDKNDIKQEIMRSSGRALKR
TTKPTVLHMLQNRELGRNKKQHFTLEDQRLINCQYLPNRMTTVANYRHKAFCGTYSKDGS
IFLSASQDQNIRIYDTKDDMFKLMKTIRARDVGWSILDTAFSPDGNYLIYSSWSDAIHLC
NIHGDYDTHIPLPLMPGDHSFAIFSLTFSSDNTEILGGANDRCLYVYDRESNRRTLKIYA
HDDDVNAVAFADNSSHILFSGGDDGLCKVWDRRTLREGCPEPVGTFGGHLDGITYIDSKG
DARYLLSNSKDQTIKLWDVRKFSPSEAVESTKKAVARQGWDYRWQQVPRAVSRKRRLHGD
SSVMTYRGHSVLHTLIRCHFSPEYTTGQRYIVTGCATGALVIYDLLTGKVVSKLKGHTSC
TRDISWHPYENTIMTSSWDGKVNKWEYMHEESSDNESENEDTDSDSSDGTSRRRKSQRLA
KRERVLKQEMVCRNRHGLYE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgacgaggaagtttttcctttggatattagatatgattttatgggggcccat
aattctacaagccaacctaggatgagtgtctctgaatcggatactagacaaacaactagt
gataacgaggagtccccggatctacaagcaattctagcttttctcattcgaagtggtcaa
gttagaatcctcacgaatgatgaggacgatgtagacagtaaagaaagcgattcggatggt
tgcgagttttacggcccagctcggcctccgcaagaggatccacacccaaatacagcagag
cttgataagaatgatataaaacaggagataatgaggtcatcaggacgggctttaaaaaga
accacgaagccgaccgtgttacatatgttgcagaatcgggagctgggcagaaacaagaag
caacatttcacactggaagatcagaggctcattaattgtcagtatttgccaaatcgaatg
actacggtggccaattacagacacaaagctttctgtggtacttactcgaaagacggcagt
attttcttatctgcatctcaagatcaaaatatcaggatatatgacaccaaggatgatatg
tttaaacttatgaaaacgataagagccagagatgtaggctggagtatcttagatacagca
ttcagtcctgatgggaattacctgatatactcaagttggtctgatgcaattcacctatgc
aacatccatggggattatgacactcacatcccgctcccgctgatgccaggcgaccacagt
tttgccattttctccttgacgttttcatcagataacactgaaatattaggaggagctaac
gacagatgcctctatgtgtatgatagagaaagtaataggcggacattgaagatatatgca
catgatgatgacgtgaatgcagtagcatttgctgacaactcttcacacattttgttcagt
ggtggggatgatggactttgcaaggtatgggatcgtcgtacacttagagaaggctgtcca
gaaccagtgggtaccttcggtggtcacttggatggcattacatatattgattctaaggga
gatgccaggtaccttttgtcaaactccaaagaccagacaatcaaactttgggatgtgaga
aaattttcaccatcagaggcagtggagagcacaaagaaagcagtggctagacagggctgg
gactacagatggcaacaggttcctcgagcagtgtcacggaagagacggcttcatggtgat
tcgtctgtgatgacgtacagaggacattcggttctgcataccctgatcaggtgtcacttc
tcacctgagtacaccaccggtcagaggtacatagtcactggctgtgccacaggagcgctc
gtcatatatgatctgcttactggaaaagtggtttccaaactgaagggccatacttcttgt
acaagagacatttcctggcatccgtacgagaatacgataatgacgtcctcttgggatggt
aaagtgaataagtgggaatacatgcatgaggaatcgtcagataatgaatctgagaacgag
gatacagattcggacagctcggacggtacttccagaaggcgaaaaagtcaacgactggca
aaacgggaacgggtattaaaacaagaaatggtgtgcagaaatcgacatggtctgtacgag
tga
DBGET
integrated database retrieval system
