Ostrea edulis (European flat oyster): 125667251
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Entry
125667251 CDS
T09123
Name
(RefSeq) protocadherin-11 X-linked-like isoform X2
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125667251
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125667251
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125667251
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125667251
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125667251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SPAR
Motif
Other DBs
NCBI-GeneID:
125667251
NCBI-ProteinID:
XP_048756568
LinkDB
All DBs
Position
2:104152035..104179439
Genome browser
AA seq
1006 aa
AA seq
DB search
MMGQGIRQLFLLLALDIYTQMTVGQEISLRYDLLEQQSQETFVGNVAVDSLLKANVTQEE
LDRMKFQILTQGSKDASFFMIDEKSSTIKTANVLDREVLCEYEIQCVLEFSVAVYKQHPQ
HSNLDLFKIFTIKVNIVDANDNAPTFPKSQVALNVQESVPVDYVLLTSGAVDPDMGVNNS
IQSYTLKPSNEMFGLKEIKNIDGTTDLGLIVRYKLDRETLDFYQVEIVAKDGGFPQRSGA
VLVNITVIDDNDNRPLFSQAKYDAAIPENHPVGKSVLTLSAQDLDIDENGEFTFSFNSRV
PQKIKDKFAVNETSGEIYTISEIDFEEEDNYQFLVEVQDKGREPKSSTSIVNINILDVND
NAPQISVNLLPDGADILESAEVGRYVANFAVSDRDSGANGKVQCQVLGQFFRIEEIFTNM
YKVTIKNPLDYESKHVHNVTIQCQDQGIPQHQNTSSFLINVLDVNDNSPVFLQSIYRATI
MENNPPNEVITTVEAVDKDSGLAGKVTYFMHTDGKDNFKVHPTLGVVTVTKSLDREINPV
ILFHVNASDAGNPQLKSSTLIRLTLEDENDNTPHFKKSHFEFYVVEEQKNLPIVGRLFAE
DPDAGPNGQFSFDFASPRYPEFILDYDTGLLKAGMLDRELKTVYNFNVTVSDKGTPQRSS
VALVTIHVLDANDNMPRIIYPDNLNNTIKLMYTTPKESVIARIQADDIDEGNNSMLSFYI
HQVEPSKNDLFKMNSATGELIIAKTMHLYDADSYRLVLAVKNGVFTMYANLNVIITVSNN
TVLGPHSQDSGESNILIVVAIVVVTVILSVAIIAAICVVKYVDRHRQLQKKTRDEIVIGM
KKQESLTTESSQFTEMKPRNKKEVSFSLSDDDSMNISSLTNITSFSSYMKNPHSVYSMEE
KSSEGPQACSSIMANNTLHMDLSKDHLTEKNLNTLYHQQIKSPAWLRQLQEKTRRDPMSR
KADDDDSEMSAESATSDSGRGGSEEDINSNRGNPMSDSDFYCQCLV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgatggggcaagggatccgacaactatttctccttcttgctttggacatatatactcaa
atgactgtggggcaggaaatttctctgcgatacgatttactggagcaacagtctcaagaa
acgtttgtcggaaatgtagcagtggacagtttactgaaggccaatgtgactcaggaggaa
cttgaccgcatgaaatttcaaattctaactcaaggaagtaaagatgcctcattctttatg
attgatgagaaatccagcacaatcaaaactgcaaatgttcttgatagagaagttctctgt
gaatacgaaattcaatgtgttctggaattcagtgtggcagtttacaagcaacaccctcaa
cacagtaatctagatctcttcaagatttttacaatcaaagttaacattgtagatgccaat
gacaatgctccaacatttcctaaatcccaggtggctctgaatgttcaggaatccgtgcct
gtggattacgtcctcctgaccagtggagccgtggacccagacatgggtgtcaacaattcc
attcaatcctacacgcttaaacccagcaacgaaatgtttgggttgaaagaaatcaaaaat
atcgatggaaccacagatttaggactcattgttcgttataagttagatcgtgaaacttta
gacttctaccaagttgaaattgttgccaaagatggcgggtttcctcagcggtccggggct
gttcttgtgaatatcactgtgatcgatgacaatgacaatagaccattattttctcaggct
aaatatgatgctgctattccagaaaatcatccagttgggaaaagtgttttaactttatca
gcccaagatttggatattgatgaaaatggtgaatttactttttcatttaattcaagagtg
ccacaaaaaataaaggacaaatttgctgttaatgaaacctcgggggaaatttacaccatt
tcagaaattgactttgaagaggaagataattatcaatttttagtggaagtgcaggataaa
ggaagagaacccaagtcatccacctccattgtaaatatcaacattttggatgttaatgac
aatgccccacaaatcagtgtgaatctgcttccggatggagcggatattctggaatcggca
gaggttgggaggtatgtggccaactttgctgtgtcagatcgagacagtggtgcaaacgga
aaagtccagtgtcaagtgctgggacaatttttcagaattgaggaaattttcaccaacatg
tacaaagtgaccatcaaaaatccactggattatgaatctaagcatgttcataatgtaacc
attcagtgccaagaccaggggattccccagcaccagaacacatccagcttcctcatcaat
gtgctagatgtcaatgacaacagtccagtgtttctacagtctatatacagggccaccatc
atggagaacaatccaccaaacgaagtcatcaccactgtggaagcagtggacaaggactcg
ggtctggctggaaaagtcacctatttcatgcacactgacggaaaagataattttaaggtt
catcccacattaggagtggtcactgtgacaaagtcactggaccgtgaaataaatccagtc
attttgttccacgtgaatgcatctgatgctggtaatccacagcttaaatcttccaccctt
atcagactgaccctggaagatgagaatgacaatactccacattttaagaagtcccacttt
gaattttatgttgtagaagaacagaagaacctgcccattgttgggcgcctctttgcagaa
gatccagatgcaggacctaatggtcaattctcttttgattttgcatcccctcgttaccct
gaatttattcttgattatgataccggtttactaaaggctggaatgctggacagagagctg
aagacagtgtataactttaatgtaacagtatcagacaaaggaactccccagcgctccagt
gtggcacttgtaactattcatgtactggatgccaatgacaatatgccaaggattatctac
cctgataatcttaataacacaatcaaactcatgtacaccactcccaaagaatccgtgatt
gccagaatacaagcagatgacattgatgaaggaaataattccatgctttcattctacatc
caccaagtggaacctagtaaaaatgatcttttcaaaatgaactccgcgacaggggagtta
atcattgccaagacgatgcatctgtatgatgctgactcgtataggctcgtgttggcagta
aaaaatggagttttcaccatgtatgccaacctgaatgttatcatcactgtcagtaacaat
acagtactaggcccacattctcaggactccggagaaagtaacatattaatcgttgtcgcc
atcgtcgtggtgactgtcatcctttctgttgctatcatcgctgccatttgcgttgtgaag
tatgtggacagacatcgacaacttcagaaaaagacacgagacgagattgtgattggtatg
aagaagcaggagagtcttacaactgagtcgtcacagtttacagaaatgaagcccagaaat
aagaaggaagtcagcttttcattaagtgacgacgattccatgaacatctcgtctctgaca
aatatcacctcattctcttcctacatgaagaatccccattctgtctactccatggaggaa
aaatcatcagagggtccacaggcttgtagttccattatggctaacaataccctacacatg
gacttgtctaaggaccacttgactgagaaaaacctcaatacgttgtatcaccaacagatc
aaatcacctgcctggcttcgacagttacaggaaaagaccaggagagaccccatgtccagg
aaggcagatgatgatgacagtgaaatgtctgcagagtcagctactagtgacagtggaagg
ggaggcagcgaagaggatataaatagcaacaggggaaaccccatgagtgattcagacttc
tattgccagtgtctggtctga
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