Ostrea edulis (European flat oyster): 125667252
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Entry
125667252 CDS
T09123
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125667252
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oed01009
]
125667252
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oed04515
]
125667252
Protein phosphatases and associated proteins [BR:
oed01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125667252
Cell adhesion molecules [BR:
oed04515
]
Cadherins
Protocadherins
125667252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_pro
TMEM154
Cadherin_CELSR2_9th
Fibulin_C
Ninjurin
Motif
Other DBs
NCBI-GeneID:
125667252
NCBI-ProteinID:
XP_048756569
LinkDB
All DBs
Position
2:complement(104180949..104194137)
Genome browser
AA seq
1155 aa
AA seq
DB search
MNENMSKKNIFGAVIVAAVVCIIRSGQGQQTEELHYKILEEQLPLTFVGNIANDSNLRDE
VTSVMMSQLTFQIWNAGNTAYDKLFHISESSGRLETATVIDREKVCQPTSSCILSLGVAV
FQPDNELLKVIKVLVTVEDINDNFPVFSQPSISMKVSEASDIGHVLLTNTAHDGDSGGQN
SVLTYELVSGGPTFSVKLVQDVDSRENLGIVVEDKLDRELQDFYQLVIVAKDAGIPQRNG
TLRVNITVLDANDNTPSFLNKTYSIKVSEDQANGTVILRLSADDKDINNNGRITYEYSSR
TSTQLKEEFQLDETNGEIRISSPLDYEKETKYQFVVIARDNGIPSLSTQVIVNITVLDIN
DNAPQINVNLPPGGTGVVENAEVGQYIATVVVSDPDGGENGTVNCTVSNENFNIVKMYPS
IFKIILGSRLDREKVPVHNLTINCFDFGNPPKTNKTFFYVNVSDVNDNFPVFSKNIYEVD
FPENNIIGDVIVHVSANDKDEGENGRVTYQFLTMQSDFAINPTSGIITASRIFDRENISD
TTFVVIARDNGVSKQKFSSTATVFVRIKDINDEYPLFSQTRYDILVAEEQPINKTIGQFS
AEDRDSGINGEFDFHIEEGFSKIFAIDPTGGLKTKILLDREKREEYHFQIYVTDRGTPVL
TSTANVSLYLEDINDNPPTIFYPNDRNNSISLSLQTVPNTIIARVIANDTDKGVNAHLTY
HIIQGNLNNLFSIDNETGVIRLERSPTEDEAGTYNLVMAVSDSGDPSKANWSHLVITVGE
KSNSQNLIIVIVVCSVTMVISLALILIICIIRKRDLKKYQHKEKHFKTSHKSLLRKCLFC
LTTPKQPKQLTTENNNNRYTEAMPSTSHNDKMYTQLVRGTKPDLARVDSGIGEVSPPDSG
LGDSADVGSEIYRSDMDLSSVPLPPPGFSDKSSHSLSPGQSEQDIPNNSAWHQQTRVTFN
DYQRNISLDEQMLRRNPKPPIYFARFRSSSESESLSKDPSSSSDKIDVSHSSSFKHNNID
LSQSYSGPFFSKSLDRNNKNIHFARGRPQYSRQPRAAVRRELPTISASPDLYDPIQELTE
ISYQDDDMYSHSNHYRDQVSLHDSQSQISQNPSLDFTGKITLAENQSQYSNDTTLASFAI
NPSNFESVFNTDVVV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatatgagtaagaagaatatctttggtgctgtgatagtggcagcggtggta
tgcataatcagatcaggtcaaggtcaacagacagaggaactgcattacaagatattggaa
gagcagttgcccttgacctttgtagggaatattgctaatgacagtaatctaagggatgaa
gtgacttctgtgatgatgtctcagctaacgttccagatctggaatgctgggaatactgcc
tacgacaaattgttccatatcagtgaatcttcaggccgcctagaaacagctactgtcatc
gatcgggagaaggtctgtcagcccactagtagctgtatcctcagcctgggagttgctgtt
tttcaacctgataatgagttgctgaaagttataaaagtccttgtcacggttgaagacatt
aatgataactttcccgtgttttctcagccgtccatttccatgaaggtttcggaagcaagt
gacataggtcatgtactcctgacaaacacggcacatgacggggacagcggagggcagaac
tctgtcttgacctatgaacttgtgtcaggaggaccaacctttagtgtaaagcttgttcaa
gatgtagactctagggagaacctaggaatagtagtggaggataaattagacagagaactg
caagacttctatcagctggtgattgtggctaaagatgccggtattccacagagaaatgga
actcttcgagtcaatattactgtgctggatgctaatgataacacaccaagctttctgaat
aagacctacagcattaaagtatcggaggaccaggctaatggaacagtcatcttgcgtcta
tcagctgatgataaggatataaacaacaatggtaggatcacttacgaatacagttcccgt
acatctacccagctgaaagaagagtttcagttagatgaaactaatggagaaattagaatc
agcagcccactggattatgaaaaagagactaaataccagtttgttgtcattgctagagac
aatggcattccttccttgtccactcaagtgatagtaaacatcacagtgttagatatcaat
gataatgctccacagatcaatgtcaatctaccaccaggtggcactggtgtggtggagaat
gctgaagttggtcagtacattgccacagtagttgtctcggaccctgatggaggagaaaat
ggaaccgtcaactgcaccgtatctaatgaaaatttcaacattgtaaaaatgtaccccagc
atcttcaaaatcatactgggtagtcgactcgacagagaaaaagtaccagtgcacaattta
acgatcaactgtttcgatttcggaaatcctccaaaaacgaacaagaccttcttctatgtg
aatgtcagtgatgtgaacgacaattttcctgtgttcagtaagaacatttacgaagttgat
tttccagaaaataatataattggtgatgtgatagtgcatgtctctgccaatgataaagat
gaaggagaaaatggccgagttacataccagtttttaaccatgcagtctgactttgccatc
aatcctacctcgggaatcattacagcgagtcgtatatttgacagagagaacatttcagat
accacttttgtggttattgctagggataatggtgtcagcaaacaaaagtttagctccaca
gcaacagtttttgtcagaataaaagacataaatgatgaatatccgttgttttcacaaact
agatatgacatccttgtagcagaagaacaacctataaataagactattggacagttttct
gctgaggatagagacagtgggataaatggagaatttgactttcacattgaggagggcttt
tcaaagattttcgccattgatccaactggaggtctgaaaacaaaaatcctcctggataga
gaaaaacgggaggagtaccattttcagatctatgtgactgacagaggaacaccagtcctg
accagcactgccaatgtttccttatacctggaggatattaatgacaatcctcccaccatt
ttttaccccaacgatagaaacaattccatctccctgtctctgcagactgtaccaaacacc
atcatcgctcgagtgattgcaaacgatacagacaaaggagtcaatgcacacctgacttat
cacattattcaagggaacctcaacaacttgttctcgatagacaacgaaactggggtaatc
agactggagcgttcaccaacagaagacgaagctgggacctataatcttgtcatggcagtc
tccgactctggagacccttccaaagccaactggagccacctggtgatcactgttggagaa
aaatccaattctcagaatctaattattgtcattgttgtctgttccgttaccatggtgatc
tctctagcactgattctaatcatctgcattatccgcaagagagaccttaaaaagtaccaa
cacaaagagaaacactttaagacatcgcacaagagtcttctcagaaaatgcttattctgc
ctgacaactccaaaacaaccaaaacaactgacaactgaaaacaacaacaacaggtacaca
gaagcaatgcccagcacgtctcacaatgacaagatgtacacacaactagtgaggggcact
aagccagacctggctcgagttgacagtggtataggggaagtctcacccccagatagtggg
cttggtgacagtgctgatgttggcagtgaaatatacagatctgatatggacctctcctct
gtgcctcttcctcctccaggcttttctgataaatcctctcactccctctctcctggacaa
tctgagcaggacattccaaataattctgcctggcatcagcagacaagagttactttcaat
gactaccagcgtaacataagtctggatgaacaaatgttacgaaggaatccaaaaccacca
atttattttgcaagattccgatccagttctgaatcagaaagtttatccaaagacccatct
tcaagtagtgataaaatagatgtgtctcatagctcctcatttaagcataataacatagac
ttatcacagtcctattctggaccattcttctcaaagagtttggacagaaataataaaaac
attcactttgcacgaggaagacctcaatattcacgtcagcctcgagctgctgtgagaaga
gaacttccaacaatcagtgcttccccagatttatatgatccaatacaagaactcacagag
atctcatatcaggacgacgatatgtacagccacagcaatcactatagggaccaggtctcc
cttcatgacagccagtcccagatttcccaaaatccttcactggacttcacaggaaagata
actctggctgaaaatcagtcccaatactccaatgacacaacattggcaagctttgccatc
aatccttccaatttcgaaagtgtgttcaatactgatgttgtagtttga
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integrated database retrieval system
