Ostrea edulis (European flat oyster): 125667348
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Entry
125667348 CDS
T09123
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125667348
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oed01007
]
125667348
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125667348
03029 Mitochondrial biogenesis [BR:
oed03029
]
125667348
Enzymes [BR:
oed01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
125667348
Amino acid related enzymes [BR:
oed01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125667348
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125667348
Prokaryotic type
Other AARSs
125667348
Mitochondrial biogenesis [BR:
oed03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125667348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
E3_UbLigase_RBR
Motif
Other DBs
NCBI-GeneID:
125667348
NCBI-ProteinID:
XP_048756801
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All DBs
Position
1:107027726..107049337
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AA seq
611 aa
AA seq
DB search
MRIEKMSHLKKLVSRKITNSILRKCKTDISQRELENEIYFLVKHSSYRHRTDKFPSLSVN
RKYLQKLTKTSEKDLENAILERSHDFENIAFSRKGNDINFMVNPREFMQEVLREVCRRKD
HYGKTENLGSKKLNILVDFSSPNIAKEFHEGHLRSTVIGNSLCNLYEAAGHDVVRVNYLG
DWGTQFGVLLSGYERFGDEKSLEENALAHLSEVYVRANQEIKNDSTMMTQATEINRLLEE
GNKEYLKLWEKFRNISISEYKKLYKVLGVEFDVYEGESMYYNKSQDVIDRLAEKGCIERS
DTTEHVMAVYNCPRSGVRREVVLQKKDGTSLYITRDLAAALERKRKFGIDALQYIVDQRQ
VGHFENLLNLLRILDPTESWSKGVQFYRSFGEIEGLSSREGKVLLLRDIIEDLSESMLES
MQNPDHQYSREDCDPAELKQRAITLAVSHLIYTDLRSNHNRPYKWKSDEQTTKSWKLRKG
NVVPVQYCHARLCQLLENPPIPLKLNPDACAEDLRCNDEVSIATLPLQLVIQMARLEEVI
HEGVNHSQSYCIHHYVEQLVSLIGKTYENYRINDKSISKEQEEVRYLLFFCARQTLSNAL
KLLGIPPMDKV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgaaaaaatgtcacatttaaaaaaattggtttctagaaagataacaaattcc
atattaagaaaatgtaagactgacatttcgcagagagaactagagaatgaaatttatttt
cttgtgaagcatagtagctaccgacataggactgataagtttccatcgttaagtgtgaat
aggaaatatctacaaaagctaactaaaacatcagaaaaagacttagaaaatgcaatacta
gagagaagtcatgattttgaaaacatagcattcagtcggaaaggaaatgacataaacttc
atggtgaatcctcgtgagtttatgcaggaagtgctcagagaagtgtgcagaaggaaagat
cattacggcaaaacagaaaatctcggaagcaaaaagttgaatatcctcgtagatttcagt
tctcccaacattgccaaagaatttcatgagggtcacttgcgttccacggttataggaaat
tctctgtgtaatctgtatgaggccgctggacatgatgttgtgcgggtcaattacctagga
gactggggcactcagttcggtgttttgttaagtggatatgagagattcggagatgaaaag
tccttggaagaaaatgcattggctcacttaagtgaagtgtacgtccgagcaaaccaagag
attaagaatgactccaccatgatgacacaggcaactgaaattaacagattactggaggaa
ggcaacaaagaatatttaaaactgtgggagaagttccgaaatatcagcatttcagagtat
aagaaactttataaggtattaggagtggagtttgatgtctatgaaggggagtccatgtat
tacaacaagagtcaagatgtcatagatcgcttagcagagaaagggtgcattgaaagatct
gacaccactgagcatgtcatggcggtgtataattgtcccaggtcaggggtcaggagggaa
gtggttctacagaagaaagatggaacttctctgtacattacaagagaccttgctgctgcc
ttagaaaggaaaagaaaatttggaattgatgctcttcagtatattgttgatcagagacaa
gttggacactttgaaaacctcttaaatttgttacgcatattggatcctactgaatcttgg
agcaaaggagtccagttttaccggtcatttggagaaattgagggcctcagctccagggag
ggaaaggttttattgctgcgagatatcattgaagacttgtcagaatccatgctggaatcc
atgcagaacccagaccaccaatactccagggaagattgtgacccagcagaactgaaacaa
cgagccattactcttgctgtcagtcatctgatttacacagatctacgatccaatcacaat
cgtccttacaagtggaaatcagatgaacaaaccacaaaaagctggaagctgaggaaagga
aatgttgtccctgtacaatactgccatgccagactgtgccaattgttagaaaaccctccc
atacctctgaagctaaatccagatgcctgcgcagaggacctgaggtgtaatgacgaggtt
tctatagcaacacttccattacagcttgttatacaaatggccaggctggaagaagtcatt
catgaaggtgtgaatcacagtcagtcctactgcattcatcactacgtagaacagctagta
tcacttataggaaagacttatgaaaactatagaataaacgacaagagtatctctaaggag
caggaagaggtgcgatatcttctgtttttctgtgccaggcaaacactttccaatgcttta
aaacttcttggaatacctccaatggataaagtctga
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