Ostrea edulis (European flat oyster): 125667554
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Entry
125667554 CDS
T09123
Name
(RefSeq) notchless protein homolog 1-like
KO
K14855
ribosome assembly protein 4
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125667554
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125667554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
NLE
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_DCAF12
WD40_RFWD3
RMC1_N
PD40
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Ge1_WD40
eIF2A
Beta-prop_SPT8
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
125667554
NCBI-ProteinID:
XP_048757057
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All DBs
Position
1:106717568..106776658
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AA seq
484 aa
AA seq
DB search
MTEETDSDMSDEKRILAQFKSENGDVTGNAFDLPLNITAEKLQLICNAMLTNEDPIPYSF
FVNDVEVSDTLVKALDNKALEDREQVLDIVYLPQAIFRVRAVTRCTSTIPGHAEAVISVA
FSPDGRYLASGSGDTTVRFWDVQTETPHHTCKGHKHWVLCIAWSPDGRKLASGCKNSQIC
VWDPETGQQKGKTLTGHKQWITWLAWKPFHLDADCRFLASSSKDGSVKIWDTLMSQCHIT
LSGHLQSVTCIKWGGANLIYSASQDRTVKVWRAEDGVLCRTLQGHGHWVNILALSTDYVM
RTGAFEPANATIVPRDTEESAESLSKVAKERYEKAKGNGPERLVSGSDDFTLYLWQPNED
KKPITRMTGHQQLINDVRFSPDTRLIASASFDKSCKLWDGRNGKFLATFRGHVNRVYQVA
WSADSRLVCSGSSDSTLKVWDIKQKKLLLDLPGHADEVYAVDWSPDGQRVASGGKDKVLK
IWRK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagacagactcagacatgtcggatgagaagagaattctggctcagttcaag
agtgaaaatggagatgttacaggaaatgcatttgatttacctttgaatatcacagcagag
aaacttcagttgatctgcaatgctatgttaaccaatgaagatcctatcccatactccttt
tttgtcaatgatgttgaagtgagtgataccctggtgaaggcgcttgacaataaagcctta
gaggacagagagcaggtcctggatatagtgtatctgccccaggctatattcagagtgagg
gcggtaacgaggtgcactagtaccattcccggccatgccgaggctgtcatctccgtagca
ttcagtccagacggacggtatttggcgagtggttctggagatacaactgtacgtttctgg
gatgtgcaaacggaaactcctcaccatacctgtaaaggtcacaagcactgggtgttgtgc
atagcttggtcacctgatggaagaaagttagcttcaggttgtaagaacagccagatctgt
gtatgggacccagaaactggtcaacagaaagggaagacattgacagggcataaacagtgg
ataacatggctggcatggaaaccttttcatctagatgcagattgcagattccttgcaagc
agttccaaagatggcagtgtaaagatttgggatactttgatgagccaatgtcacatcact
ttatcaggtcacctgcaatctgtcacatgtatcaaatggggtggagctaacctcatatac
tccgcctcccaggacaggacagtgaaagtgtggagagcagaggatggagttttgtgtagg
acattacaaggtcatggtcactgggtcaacatcctggcacttagcactgattacgtcatg
agaacaggagcatttgaaccagctaatgctacaatagtacctcgagacactgaagaatca
gctgagagtttgtccaaagttgcaaaggaaagatatgaaaaagcaaaggggaatggtcct
gagagacttgtatcgggctcagatgatttcactctgtatctatggcaacccaacgaggac
aagaaaccaatcaccagaatgacaggacaccagcaacttatcaatgatgtccggttctct
ccggataccagactaatagccagtgcctcgtttgataaatcttgtaaactttgggatgga
agaaacggaaagtttttagcaacattcaggggtcatgtgaaccgtgtgtaccaagtggcc
tggtcagctgatagtcgacttgtgtgtagcggaagttctgactccactctcaaggtgtgg
gacatcaaacagaaaaagcttctacttgacctcccaggccatgcagatgaggtgtatgct
gtggactggagtccagatggacagagggttgcaagtggggggaaagacaaagttcttaaa
atatggagaaagtaa
DBGET
integrated database retrieval system