KEGG   Ostrea edulis (European flat oyster): 125667839
Entry
125667839         CDS       T09123                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
oed  Ostrea edulis (European flat oyster)
Pathway
oed03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oed00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125667839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oed03041]
    125667839
Spliceosome [BR:oed03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125667839
 Complex B
    125667839
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 125667839
NCBI-ProteinID: XP_056004471
LinkDB
Position
9:10869347..10887960
AA seq 590 aa
MAAVAPQPPLLNGDMMQENGLGPIEIKRMKTDEEFMLENGIFIPQAEQQGSILEGPGAKR
DQKPFVLPKLSSTQHELVQKAKKYAFEQSIKSVLVKQTIAHQQQQMQNFQTTVQRQQALA
LMCRIYVGSINFEIKEDTIKQAFIPFGPIKSVNLSWDPVTNKHKGFAFIEYEIPEAAQLA
LEQMNSVMIGGRNIKVGRPSNMPQAQPIIEQLATEAKNHNRIYIASIHHDLTENDIQSVF
EAFGKIVNCKLATETGKPGKHKGYGFIEFDSQQAAQDAVTSMNLFDLGGQYLRVGKAITP
PDALQPMAGPGTLPTAAAVAAAAVTAKITAMDAQEQIKSLAPPGVAKPLSLGDSPSLSSS
PVAPPGVAAPVPVPPVSVVVPQLGSAGVAAPTGLGMVVPPIVEVPGIIPPAVVAPTVLGT
PPVPPSLPASIPAMIPLPPQDKEKDLKKEEEEKKKKAEEESTQTLDQQENMKISGTNARH
MVMQKLMRKTECKVMVLRNMVGPEDLDSELENEVTDECGKYGNVNRVIIYQEKQSEEEDA
EIIVKIFVEFNAQSEVEKACAALNGRYFAGRIVTAEKYDEDMFNANDLSG
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctgctgtcgctccacaaccccctcttctaaatggagatatgatgcaggagaatggt
cttgggccaatagaaataaagagaatgaaaacagatgaagaatttatgttagagaatgga
attttcatacctcaggcagaacagcaggggtctattcttgaagggccaggagccaaaaga
gaccagaagccctttgttcttcccaaactgtcatccacccagcacgaacttgtacagaaa
gccaagaaatatgcctttgagcagagcatcaaaagtgtcctggtcaaacagacaattgcc
catcaacaacagcaaatgcagaatttccagacaacagtgcagagacaacaggctttggct
ctgatgtgcaggatttatgttggcagcatcaattttgagattaaggaagacacaatcaaa
caagcctttattccttttggtccgataaagagtgtaaacctctcctgggaccctgttact
aacaaacataagggctttgccttcattgaatacgagattcctgaggcagcacagctggcc
ttggagcagatgaacagcgtcatgattggaggaagaaatattaaggttggtcgaccaagc
aatatgccacaagctcagcctatcatagaacagcttgctaccgaggctaaaaaccacaat
aggatctacatagcttccatacatcatgatcttactgagaatgatattcagagtgtgttt
gaagcctttggaaagattgttaattgtaaactggccacagagaccgggaagcctggaaaa
cacaagggttatggatttattgagtttgactcgcaacaagctgctcaggatgctgtaact
tcaatgaacttgtttgatcttggaggccagtacctgagagtgggaaaggccatcacaccc
ccagatgccctacagcccatggcagggcccgggacattgcccacagcagcagctgttgct
gcagcagctgttacagccaaaatcacagcaatggatgctcaagaacagatcaagagtctc
gctccaccaggagttgccaagcctctaagtttgggagacagtccctctctctctagctcc
cctgttgcccctccaggggtagcagccccagtccctgtacccccagtgtcagttgtagtg
ccacagcttggttcggctggtgttgccgctccaaccggtcttggaatggtggtgcctcct
atagtggaagtgcctggaataatccccccagcagttgtggccccaacagttctgggtacc
cctcctgtaccaccatcattaccagcctcaatcccagctatgatccccctacctccacaa
gacaaagaaaaagatttaaagaaagaggaagaagagaaaaagaaaaaggcagaagaagaa
tccacacaaacactggatcaacaggaaaacatgaagatcagtggcacgaacgctcgacat
atggtcatgcagaaactcatgaggaaaacagagtgcaaggtgatggttctaagaaacatg
gttggaccagaggacctggacagcgagctggaaaatgaggtcacagatgaatgtgggaag
tatggaaatgtaaacagagtcatcatttaccaggaaaagcagagtgaggaagaagatgca
gagattatcgtcaaaatatttgtggagtttaatgctcaatcagaggtggaaaaggcttgt
gcagcactcaatggcagatattttgctggaagaatagtcaccgcagaaaaatacgacgag
gacatgtttaacgctaatgatttatctggatga

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