Ostrea edulis (European flat oyster): 125667911
Help
Entry
125667911 CDS
T09123
Name
(RefSeq) E3 ubiquitin-protein ligase Rnf220-like isoform X2
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125667911
Enzymes [BR:
oed01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125667911
Ubiquitin system [BR:
oed04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125667911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_2
PRP21_like_P
zf-RING_UBOX
Lectin_N
Endonuclease_7
zf-Nse
Motif
Other DBs
NCBI-GeneID:
125667911
NCBI-ProteinID:
XP_048757550
LinkDB
All DBs
Position
4:72284057..72318473
Genome browser
AA seq
562 aa
AA seq
DB search
MSGVSDFAMFRFNFWQKPFLSHHAAVLAASQINAMENSTYLPNPLTSPALMVLASTAEGH
EGGRLPAPPHPYPSSADGKEMVSPYGNPPFTMYRPGDPFPPPMYSGVPHFVRPDRNMGIM
PPVATSAFRPVSTDSESSYHSAFGPSAKKPKLEAGLTEEEDREEGSPRSSSSTHIKEERP
NSINSTTNSEGLSDGGEFDRRTPDEGRTLRKLRKKSALDGQTPCCPICGLTLRGGEVDTH
FALEVDRLEKIVRSGRRSRDTTPQCRKTLTSPLAQKQRKDSPSIEAASQSRYDTYMRIKC
NRQSRLSARSRNRKKRPDETICPVCNDRVAGLPEELNAHVEICLKRKTEEDEPVDVEGDE
QCEEYTWAGQTRIRATTLLQGGLGGSGFQTYSSRRHIEEDIDLDVDGDDSKQYGEPQYSE
ADIIPCTSEEPDEDRERAALRGAILGSSSSTVTGNTVSHADSDSPDEFGADHSTMDSDET
FGGSASEVISALKLKIKDQEKTMKKDKSKCLICMEPYANPLTSIQCWHVHCEDCWLKTLG
AKKLCPQCNMITAARDLRRIYL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagtttctgactttgcaatgtttcgattcaatttttggcaaaagccatttctc
tctcaccatgctgctgttcttgcagcatcacaaattaatgctatggagaattcaacatac
ctccctaatccattgacttcacctgctttgatggtactggcttcgactgctgaaggtcac
gaagggggacgccttcctgctcctcctcacccttacccttctagtgctgatggaaaagaa
atggtctcgccctatgggaatcctccctttaccatgtataggccaggggaccctttcccc
cctcctatgtattctggagtgccgcactttgttcgacctgaccggaacatgggaatcatg
ccgccggtggctaccagtgcatttagacctgttagtacagactctgaaagttcctatcac
tcagcatttggaccatcagcgaaaaaacctaaattagaagcagggctgacggaggaagaa
gatagagaggagggtagtcctagatcttccagctctactcacatcaaggaggagcggccc
aatagtatcaattcaactactaattccgagggtctatcggacgggggcgagtttgaccgt
agaacacccgatgagggacggactctcagaaagctgaggaagaaaagtgctttggacggc
cagactccatgttgtccaatctgcggactcactttgaggggtggagaggtggatactcac
tttgctttggaggttgaccgactggagaagattgttaggagtggcagaagatcaagggac
acaactcctcagtgcagaaagacattaacctctcctttggcccagaagcagaggaaggac
tccccctccattgaggcagcctcccagtcccgatatgatacatacatgcgaatcaagtgt
aatcgccagtcaagacttagtgctcggagcaggaaccgcaagaaacgtccggacgagaca
atctgtccagtgtgtaacgacagggtggcggggttgccagaggaactgaatgctcacgtc
gaaatttgtctgaaaagaaaaaccgaggaagatgaaccggtagatgtggaaggagatgag
cagtgtgaggaatacacatgggcaggacaaactcgaataagggccaccactctgttacaa
ggaggcctaggaggttctggtttccagacttacagtagcaggagacacattgaggaggac
attgatttggatgtggatggagacgattctaaacagtacggggaacctcaatacagtgag
gctgacatcattccttgcacctcggaggaacctgatgaggacagagaaagggcagccctt
cgaggagccattctaggctcatcgtcgtctacagtgactggaaataccgtctctcacgca
gactcggacagtccggatgagtttggagcagatcactctacaatggacagtgatgaaacc
tttggtggatctgcatcagaagtcatatcagctttaaagctgaagattaaggaccaggaa
aaaaccatgaagaaggataaatcaaaatgcctcatttgtatggaaccgtacgccaatcca
cttacttccatccaatgctggcatgttcattgtgaagactgttggctgaaaactcttggt
gcaaagaaactgtgtccacagtgcaatatgataactgcagccagagacctacgcagaatt
tacttgtga
DBGET
integrated database retrieval system
