Ostrea edulis (European flat oyster): 125667987
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Entry
125667987 CDS
T09123
Name
(RefSeq) PDZ and LIM domain protein 7-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125667987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oed04990
]
125667987
Domain-containing proteins not elsewhere classified [BR:
oed04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125667987
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
DUF7479
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
125667987
NCBI-ProteinID:
XP_048757664
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All DBs
Position
4:37339563..37364967
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AA seq
596 aa
AA seq
DB search
MASVLTLEAKLERVDPTTPWGFRMQGGKEFGIPLTILKVNQGSLAAKCGLQQGDVILKIG
NQETTNQKHKEAQDLIIGSGNKLDLLLQRIREKKSNTNRGAPAPQHSYEKFATPTYNSYP
SPSGAPQPGSQNYNTAAKPFGSPAARPDVDSVTQQTSQISFSPKPAVVPAPPPPPPPSQG
PGFYPAAQKYTESEEKPTSSQLQSRSFKFLQGIMDSGQDPPSALRPSPGQVVRSVSPNTT
QNNFNSKPRQFNTPQGLYSEESTDSSLKLARSGNEEQEEGERNVDGQGKVVYRPSETFKM
VHEQDTPTVAKQEDDYKPTHSRTFKMLQEKLGAGDQPSTPKAPPAPAPSSAPKPGVWTPP
SAPTAKPFTPTVQPPAPAAPGGPKMGPPRNPTGVNAVRVKKGEATIFKSGETAPGISRIP
VCASCNISIRGPFVVAMGKTWCPDHFVCQNPKCGQKLLDIGFVEEGGFLYCEKDYEQYFA
PTCTKCGKPIVGECVNALQKTYHPNCFLCYQCKQPIGGNQFHLEDGNPYCENDWRQMFQT
MCKGCDFPIEPGDHWVEAMGNNFHSECFNCSTCGINLEGQPFYAKGGKPYCKKHTR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttttaactttagaggctaaattagaaagggttgatcccacaacaccatgg
ggatttcgtatgcaaggaggaaaagaattcggcattccgctgacaattctaaaggtaaat
caaggaagtcttgcagccaagtgtggacttcaacaaggggatgttatcctaaaaattggt
aaccaagagaccacaaatcaaaaacacaaagaagcccaggatttgatcattgggtctggc
aacaaattagatcttctgcttcagagaattcgtgaaaaaaagtctaacactaatcgaggt
gcccctgctcctcagcactcctatgagaagtttgctacccctacctacaactcgtacccg
agtccatctggtgctcctcaaccaggctcccagaactacaatacagcagcgaaaccgttt
ggatctcctgcagcccggcctgatgtcgactcagtcacacagcaaactagtcaaatctct
ttctccccgaaaccggcagtggtgccagcaccccctcccccacccccaccctcccagggg
ccaggcttttaccctgctgcacagaagtatactgagagtgaggagaaaccgacatcgtct
cagctccagtcacggtccttcaagtttctgcaaggcatcatggatagtggtcaagatcca
ccctctgccttgcggccctcacctggacaagtggtccgaagcgtctccccaaacaccaca
caaaacaactttaactccaaacctcgtcagttcaataccccacaaggactttattcagag
gaaagtaccgatagttcattgaaacttgcaaggtcaggaaatgaagaacaagaggaggga
gagagaaatgtggatggtcagggaaaagttgtgtatcgtccatcggaaacattcaaaatg
gtgcatgaacaagatactcctactgtagccaagcaggaggatgattataaacccactcat
tccagaacatttaaaatgctccaagagaagttgggagctggggatcagccctcaacaccc
aaggcaccaccagcaccagcgccatcttcagctcccaagccaggagtatggactcctcca
agtgctccaactgccaaacctttcacccctacagtgcagcctccggcccctgctgcccca
ggggggcctaaaatgggacctcctagaaaccccactggagtcaacgctgtgagagtcaag
aaaggtgaagctacaatcttcaagagtggggagactgcccctgggatctccaggatacca
gtgtgtgcttcctgtaacatttctatcagaggcccatttgtggttgctatgggcaagaca
tggtgccctgaccactttgtgtgtcagaaccctaaatgtggacaaaaactgctggacatc
ggttttgtggaggaaggaggcttcttgtactgtgaaaaggattatgagcagtactttgcc
ccgacttgcaccaagtgtggaaaacccattgtgggggaatgtgtaaatgctctgcagaag
acctaccatccaaactgtttcctctgttaccagtgtaaacagccaatcggtggaaaccag
ttccacttggaggatggcaatccatactgtgaaaatgactggaggcagatgttccaaacc
atgtgcaaaggatgtgacttccctattgaacctggggaccactgggtagaggccatgggc
aacaacttccactcagagtgtttcaactgctctacctgtggaatcaacttggaaggtcag
cctttctatgccaagggaggcaaaccatactgcaagaaacacacccgataa
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