Ostrea edulis (European flat oyster): 125668079
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Entry
125668079 CDS
T09123
Name
(RefSeq) retinoblastoma-like protein 1 isoform X2
KO
K04681
retinoblastoma-like protein 1
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125668079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oed03000
]
125668079
Transcription factors [BR:
oed03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
125668079
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
SLH
Motif
Other DBs
NCBI-GeneID:
125668079
NCBI-ProteinID:
XP_048757803
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Position
1:105070074..105120125
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AA seq
1070 aa
AA seq
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MEPTEDTDDAVERKYSELCLDLNMDKRTKEESWESYQKIQTKYTLEGDQMHWLACALYEA
CRRSVTPTVGRGTMEGNGVSLTRLLRSAKFSLIQFFNKMKKWSDMAGLPQEFIDKVNKLE
RNFAVSTVIFKKYEPIFLDLFQHSVDYQQKQNRNKKQRRLPCTSNEVFNFCWTMYVQVKG
HFPAISDDLVNSYHLLLCCLDWFYANALMGGRKDILNPSFEGLPEDFGNKDWKPPNESPC
IIQLLCEKHEGLEIEAKVIKEHWWKPHIKKLFDKKILKGKPETLSAVLEVGNFDANKKSI
SEAYEEYPLNYSSKSMNNEYEAYVLSVGDFDERVFLGSEADEEIGTPTKYREEGTGELAE
RLQVKAHLQQHFDETKTLAPSTPLTGRRYLKEKDPSTTPVSTATQSVNKLQSLLLGRKAL
PSDDLLDIFSEIGSDPKTRIMERVDEMGEVFCSHYVQETEDHAGSQIDFAQKRLQLGECL
YYKMLESVLFNEKKRMDNKEGKSALSTLMEQEIFHRSLFACCLEIVIFSYNSQRSFPWIL
EIFNLSPYHFYKVIEIIIRNEDGLSRDVVKHLNHIEENILESLVWRSESPLWEAIKEGSV
PGCEDVVLPEHDVMKNVKHPAVIRVSESQQPKRDPLMSPPPGVSAADRFSSPSPGSAKRR
LFSVLTQPTETLVPSENTPVESSTSTTSTKTTQIIAFQQAQTNDGRQILIPVHTIIHSGA
KDDKKEPAKMRPKKTGSLALFFRKLYHLASVRLRDLCEQLYLDDIELRKKMWTCFEYVLV
NHVELMMDRHIDQIIMCAIYVMAKVSDHPQSFTDIMRCYRLQPQAESHVYRSVLLSCRTR
RNSGESDSSKNGTSGQSSPVNVENAEKRKTAGVQILYERSEKLPTMRSSSTLPIPHPGSH
PPTPTILIQSASGGEEGEERGDLIMFYNRVFVEKVKKFAQKFSAQKNSKDCPPLSPLPTV
KSQTASPRRVSSKHSIYLSPHKPTLLATPMATGLSYSFQKSPAKDLRAINNMIKMKDFRE
GKKILGKRQLDVTEEDEGPQTKQLCTGFSFLKRLQNVSSERQEAHVLKLD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggagcccacggaagatactgacgatgccgtggaaagaaaatatagtgaactttgtctg
gacttaaatatggataaaagaacaaaggaagaatcatgggaaagctaccagaaaattcag
acaaagtacacactggagggagatcagatgcactggctcgcgtgtgcactgtatgaagcc
tgcagaagaagtgttactcctacagtaggccgaggaacaatggagggaaatggagtgtca
ttgactagacttcttcgttcagctaaattcagccttattcagtttttcaacaaaatgaag
aagtggtctgacatggcaggactacctcaagaatttatagacaaagtaaacaaactagaa
aggaattttgcagtttccacagtaatttttaagaaatatgaaccaatattcttagaccta
tttcaacattctgtggactatcaacaaaagcaaaataggaacaaaaaacagaggagattg
ccctgcacttcaaatgaagtatttaatttctgctggacaatgtatgtacaagtgaaaggt
cactttcctgcaataagtgatgatctggtgaactcctaccacctcctactgtgctgtctg
gactggttctatgctaatgcattaatgggaggtagaaaagacatattaaatccatcattt
gaagggttaccggaggactttggaaacaaggattggaaaccaccaaatgaaagtccctgc
attattcaacttttgtgtgaaaagcatgaagggttagaaatcgaagccaaagtcattaaa
gaacattggtggaaaccacatatcaagaaactctttgacaagaagatattaaaaggaaaa
ccagagactttatcagcagttctggaagttggcaactttgatgccaacaaaaaatctata
agcgaagcatatgaagaatatcccttaaattatagcagcaaatcaatgaataatgagtat
gaagcctatgtgttaagtgttggtgattttgatgaaagagtgttcttgggcagtgaagca
gatgaggaaattggaactcccacgaaatatcgggaggagggcacgggtgaattggcagaa
aggttgcaagtgaaagcccatctacaacagcattttgatgagaccaaaacattagcaccc
tcgactccgctgactggccggcggtacctgaaggagaaggaccccagcactacaccagtg
tccactgctacccagagtgttaacaagttacagagcctgctgttgggacgtaaagcccta
cccagtgatgacctgctggatatatttagtgagataggttctgatcctaaaactcgaata
atggagagagttgatgagatgggtgaagttttctgctcccactatgtacaagagactgag
gaccatgcaggttcacaaattgattttgctcagaaacgactacagctgggagagtgtttg
tattacaagatgttggagagtgtactgtttaatgagaagaagcggatggataacaaagaa
ggcaaatcggccctgtcgacgctcatggaacaagaaatattccatagaagcttattcgcc
tgctgtttagaaattgttattttctcttacaactctcaaagatcatttccttggatactg
gaaatcttcaaccttagtccataccatttttacaaagtaatagagataatcatcagaaat
gaagacggtttatctcgagatgttgtcaaacatctcaaccatattgaagaaaatatacta
gagagccttgtttggcgaagcgagtctccattgtgggaggctattaaggagggtagtgtc
ccgggatgtgaggatgttgtgctgcctgaacacgatgtaatgaagaatgtgaaacatcca
gctgttattagagtgtctgaatcacaacaaccaaaaagagatccactaatgtccccacca
ccaggtgtctctgcagctgaccgattcagttcaccgtcaccaggaagtgccaaaagaaga
ctcttcagtgtccttactcagcctacagaaacactagtgccatcagaaaatacaccagta
gagagcagcacatcaactacatctacaaagacgacacagatcatagccttccaacaggct
caaacaaatgatggcagacagattctcattcctgttcatactattatccactccggagct
aaggatgacaagaaagaacctgctaaaatgagacccaagaaaacgggctcattggctctc
ttcttcagaaagctgtatcatcttgcaagtgtgaggttacgagatttatgtgaacaatta
tacctagatgacattgagttacggaagaaaatgtggacttgttttgagtatgttcttgtt
aatcacgtggagttgatgatggacagacacattgaccaaatcatcatgtgtgccatttac
gtcatggccaaggtgtctgaccatccacaatctttcacagacatcatgagatgttacaga
ctacagccacaagcagaaagtcatgtgtataggagtgttttactcagctgtagaacaagg
cgaaattcgggagaaagtgatagcagcaagaacggcactagtgggcagtcatctccagtc
aatgtagagaatgctgagaaacgtaagacagctggtgtccaaattctctatgagaggtca
gaaaaactgcccaccatgcggtcatcaagtactctgcccattcctcacccgggaagtcac
ccccctactccaacaattcttatacagtctgctagtggtggtgaagaaggggaggaaaga
ggggatcttatcatgttttacaacagggtctttgtagaaaaagtgaagaaatttgcacaa
aaattttcagcccagaagaattccaaggattgtcctccactttcaccattacctacggtc
aaaagtcagacggcttctcccagaagagtgtccagcaaacactctatatacttgtcaccg
cataaaccaactctactggcaaccccaatggcaactggattgtcatactctttccaaaag
agtcctgcaaaggatttgagagccattaacaatatgataaaaatgaaagactttagggaa
ggtaaaaaaattctgggtaaacgtcagcttgatgtcacagaggaggacgaaggaccacaa
actaaacagctgtgtacaggcttctccttcttaaagcgcttacagaatgttagcagtgag
agacaggaggcccatgtcctgaagctggattaa
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integrated database retrieval system
