Ostrea edulis (European flat oyster): 125668091
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Entry
125668091 CDS
T09123
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04137
Mitophagy - animal
oed04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125668091
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125668091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oed03019
]
125668091
03009 Ribosome biogenesis [BR:
oed03009
]
125668091
04131 Membrane trafficking [BR:
oed04131
]
125668091
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oed04147
]
125668091
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125668091
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125668091
Membrane trafficking [BR:
oed04131
]
SNARE
SNARE associated proteins
Others
125668091
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125668091
Exosome [BR:
oed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125668091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
TIP49
NPHP3_N
AAA_14
RNA_helicase
Vps4_C
AAA_28
Mg_chelatase
Parvo_NS1
nSTAND3
AAA_17
ATPase_2
AAA_18
IstB_IS21
AAA_7
ABC_tran
DUF815
AAA_24
ResIII
TsaE
NB-ARC
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
125668091
NCBI-ProteinID:
XP_048757823
LinkDB
All DBs
Position
4:86365960..86383995
Genome browser
AA seq
800 aa
AA seq
DB search
MAEGTNDDLATAILKKKDRPNRLLVEEAINEDNSVVSLSQGKMDELQLFRGDTVLLKGKR
RKDTVCIVLSDDTVSDDKIRINRCVRNNLRVRLGDIVSIQACPDVKYGKRIHVLPIDDTV
EGLTGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRGVEFKVIETDPNPYCIVAPDTVIH
CEGEPVKREEEEEALNEVGYDDIGGCRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFI
DELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSVDGALRRFGRF
DREVDIGIPDATGRLEILRIHTKNMKLADDVDLEQVAQETHGHVGADLAALCSEAALQQI
REKMDLIDLEDEHIDAEVLDSLAVTMEDFRWALSKSNPSALRETCVEVPSVTWEDIGGLE
NVKKELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK
GPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNAGDGGGAADRVINQ
LLTEMDGMTAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSRISILKANLRK
SPVAKDVDVDYLAKVTHGFSGADLTEICQRACKLAIRQSIEAEIRMERERDRDPNADMEV
EDFDPVPEITRAHFEESMKFARRSVSDNDIRKYEMFAQTLQQSRGFGGNFRFPGQQSGSN
PPNQSQGGGNFDDGDDDLYS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggaacaaatgatgatctggctacagccatcctcaaaaagaaagatcggccc
aacagattattggtggaagaggccattaatgaagataattctgtggtgtctctgtctcag
ggcaaaatggatgagctgcagttatttcgtggagacacagttcttttgaaggggaaaaga
cggaaagacactgtatgtatagtgttatctgatgacacagtcagcgatgacaaaatccga
atcaacaggtgtgtccggaacaacttgagagtacgcttgggggacatagtcagtatccag
gcctgtcccgatgtgaagtatggaaagagaatccatgttctgcctatcgatgatacagtg
gaaggactcacaggaaatttgtttgaagtgtacttgaaaccctacttcctagaggcctac
agaccaatcagaaaaggggacatattcttggtgcggggaggtatgagaggggtagagttc
aaagtcatagagacggacccaaatccttattgtatcgtagcaccagacactgtcattcat
tgtgaaggagaaccagtcaagcgtgaggaagaagaggaagctctgaatgaggttggatat
gatgatattggtggttgtcgtaaacagctggctcaaatcaaagaaatggtggaacttccc
ctcaggcacccacagctcttcaaagccattggagtcaagccaccacgaggtatattgttg
tatggaccgccaggtacaggaaaaactctgattgctcgagctgtagccaatgaaacagga
gcttttttcttcctcataaacggtcctgagattatgagtaagttggctggggaatctgag
agtaatttgaggaaggcctttgaagaagcagagaagaattctcctgctatcatcttcatt
gatgaattggatgccattgcacccaagcgtgaaaagacacatggagaagtggagagaagg
attgtatcacagctgttgacgctgatggacggcctgaaacagagggcacatgtcatcgtc
atggcagccacaaacagacccaacagtgtggacggagctctcaggcgttttggtcgattt
gacagagaagttgacattggaattcctgatgccacaggacgtttggaaattttgagaatt
catacaaagaacatgaagcttgcagatgatgtagatctagaacaggttgcacaggaaacc
catggccatgtaggagctgatttagctgccctgtgctcagaggctgccctgcaacaaatc
cgtgagaagatggacctgattgatcttgaagatgaacacattgatgctgaggttttagac
tctctagctgtcacaatggaggacttcaggtgggccttgagcaagagtaaccccagtgct
ttacgggagacctgtgtggaggtaccatctgtgacctgggaagacatcgggggactggaa
aacgtcaagaaagaactgcaggagctggtccagtacccagtggaacatccagaaaaattt
ctgaagtttgggatgactccctcaaaaggtgtcctgttctatggtcctcctggatgtggt
aaaacactattggctaaagctatagctaacgaatgccaagccaacttcatctcgatcaaa
gggccagagttgctgaccatgtggtttggagagtctgaggccaatgtaagggacatcttt
gacaaggcacggtctgctgctccatgtgtgttgttttttgatgaactggattccatagcc
aaagccagaggtggaaatgccggtgatggaggtggagctgctgacagagtcatcaaccag
ctgctgacagaaatggacggcatgacggccaagaaaaatgtcttcatcataggagcaaca
aacagaccagatatcattgaccctgccatcctgagacctggtcgtctagatcaactgatc
tacattcctctccctgatgataaatccagaatatcaatccttaaagctaatctcagaaag
tcaccagtagccaaggatgtagatgtggattacttggccaaagtgacacatggcttcagt
ggagctgatctcacagaaatttgtcagagagcttgtaagctggccatccgacagtcaata
gaggcggagatcagaatggagcgagagcgagacagagatcctaatgctgacatggaggtg
gaagacttcgacccagttccagaaataaccagggcacattttgaggaatcgatgaagttt
gcccgtcgttctgtcagtgacaatgacatcaggaaatatgaaatgttcgctcaaacacta
cagcagagtcgaggatttggtggaaacttcaggttccctggacaacaaagtggcagtaat
cctccaaaccagagtcagggtggtgggaactttgatgatggcgacgatgatttatacagt
taa
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