Ostrea edulis (European flat oyster): 125668110
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Entry
125668110 CDS
T09123
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oed04040
]
125668110
Ion channels [BR:
oed04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125668110
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
125668110
NCBI-ProteinID:
XP_048757850
LinkDB
All DBs
Position
4:complement(44120002..44149056)
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AA seq
1107 aa
AA seq
DB search
MGSPSKGKLRHVVGASTIYPAYKRGESVTEKALTDKSVWQAVRDGSTKELDWLLTEHPEL
KGERDFHGNTLLLIAAKYNLIQSARVLISHNVNLNEKNRNDGISPLHEASKYNSVDVGHL
LIESGSDVMIRDNQEKTPLHHAARRGRVQMVELLLNDGNSDINATDEDKLTPLHESIIQK
HDDTATLLMKSGADVMKTEINGITPYMFASAVELIDVMNMIWKTVFRQHGGPNSQLMVNQ
KDMWGNTALHMAVDNQCLKSIKEIAKHGGEIDSKNESGHTPLHRAAIFGDLEITDTLLSS
GAAVDTRDNDSFTPLHRACLYNRHEVVSAFMKNGGDINKKTKELMTPLIMACWKGHLETV
EFLLTNGAQIAAVDNLMKNALHWTVENAHLQVLLYLLKKCDSVMLESLDFAEQTITHYAA
KLGNIAILQGLIQHDCKLDVRDRDGRTPIHIAAENDNEAAVEVLYHSSNSELNDGDSDGQ
TPLSLAVREGQYNTVKLLLSLGADITHRDENLCTALAVAAREGHVKIMKILLVHYAEINA
TDKNKNTPLHIASNKGHVDCVQVLLDKKADTMARNSRGQSPLDLAIENRHSDVAVTFMQS
KGWTDIIGSRDANGKIPVDSMIRKCPEAFLIVMEKSMQTQGDIPDSVDFTQKFDFRFIDP
GPEDLMSKNRRYYAYETMVKYNREELLTHPLVQQCLLLKWKTFGRPVYYLNVTLFILYLG
MINIYGIFMPKISTNLLDNVRRCPITLNSTMLQNQTVVDYYVQNGQISNIIIESTGLTVL
TAFLFAVVLMFYIRELISLYTRRWRYFLLPFNYVALTMLVGTSFALSPFNYIPCEHQWRA
AWIATLSAWICLISILRGLDVVGIYFVMLEQVFMSLFKISLVLVVFLIAFSQAFYITMSQ
TAGFQPGEFFPLTVLSMTIGEINFIDNFMSGSNAAFYYDNLILFFLFALIMPISLMNLLI
GVAVGDTEAVKKKAYMTRLSIQIDFLSNTETTFPRSLQKRFYKRSHTVMPNKNMYSKFNR
FYENLFGERRNNQAFISEEKPDYVTENVKKLQEDVRKTKLQLAQATSLQKQSLELLKQMC
EQLHVRYTLDNVSLAESHRTEIHSRIE
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgggttctccgtccaaaggcaaactacgtcacgtggtgggggcgtcaactatttacccc
gcatataaaagaggagagagcgtgacggaaaaggcgctgacggacaaatcagtttggcag
gcggtacgagatggcagtaccaaagaactggattggctattgacagaacacccggaacta
aagggagaaagggatttccatggaaacacactcctccttatagctgccaagtacaacctc
attcagtcagcacgcgtattgatatcacataacgtcaatctcaatgagaaaaatcgaaat
gatggaatctctcctcttcacgaagcttccaagtacaactctgttgatgtcggtcatctg
ctgatagaatcaggaagtgacgtcatgatacgtgacaaccaggaaaagacaccattacat
cacgctgcgagaagaggtcgagttcagatggtggagcttttgttgaatgatgggaactct
gacatcaatgctacagacgaagataaattgacccctcttcacgaatccataatccagaaa
cacgatgacacagctacactgttgatgaagagcggggctgatgtcatgaaaacagagata
aatggaattacaccgtacatgttcgcatctgctgtggaactaatagacgttatgaacatg
atttggaaaacagtgtttagacagcatgggggacccaacagtcagttgatggtcaatcag
aaggacatgtggggaaacacagctctacacatggcggtggacaaccagtgtctgaagtct
attaaagaaattgcaaagcacggcggtgagatcgactcaaaaaatgaatcaggacataca
cctcttcacagggcggcgatcttcggtgaccttgagataacagacacattgttgtccagt
ggggcagccgttgatacccgggacaatgattcctttactcccttacacagagcatgtcta
tacaaccgccatgaagtagtcagtgcatttatgaagaatggcggagacataaataagaaa
acaaaggaattgatgacacctctgatcatggcctgttggaaaggtcatctagaaacggtg
gaattcctgttgaccaatggtgctcaaatcgcagcagtggacaatctcatgaaaaacgcc
ctccactggacggttgaaaacgctcatttacaggttcttttgtacctcctgaagaaatgc
gacagtgttatgttggagtccttggattttgcggagcagacgatcacgcattatgcagca
aaacttggaaacatagcgattttacaaggcctgatacagcatgactgcaagttggatgtt
cgtgacagggacggaaggactcctattcacatagcagctgaaaacgataacgaggctgca
gtagaggttctgtatcactcgagcaactcggaactgaacgatggcgattcagacggacag
acgccgctatcgctggccgtcagagaagggcaatacaatacggtcaaactgcttttgtca
ctaggggctgacatcacacacagggatgagaacctgtgtacagcattggctgtcgcggcc
agggaaggtcatgtgaagatcatgaaaattcttttagtgcactacgccgagataaacgcc
actgataaaaataagaatacacccttgcatattgcgtccaataaaggtcacgtggattgt
gttcaggtcctattggacaaaaaagctgacacaatggccagaaatagccgtgggcaatct
ccgctggatttagccatagaaaatagacattcagacgttgctgtaacatttatgcaatca
aaaggatggactgatatcattggttctcgagatgctaatggtaaaattcccgtagattct
atgattcgaaagtgtccggaggcatttctgatagttatggaaaaatccatgcagacacag
ggggatattccagacagtgtggacttcacccagaaattcgacttccgttttatcgaccct
ggtccggaagacctcatgtcaaaaaatcgaagatattatgcatatgagaccatggtgaag
tacaaccgggaggagttactcacacatccactcgttcagcaatgcttactgcttaaatgg
aaaacatttggtcgacccgtgtactacctgaacgtcaccctgtttatcctctacctcggg
atgatcaatatttacggcatcttcatgccaaaaatctccacaaatctcctagacaatgtc
cgtcggtgtccaattactctgaactctaccatgctgcaaaatcagacggtggtcgactat
tatgttcagaatggtcaaatttcgaacatcataatagagagtactggtcttacggtcctt
acagctttcttgtttgctgtggtgctcatgttttacatcagagaactcatcagtctttac
acaaggagatggcggtacttcctgttgccttttaactacgttgccttgacgatgctagtt
ggaacctcctttgccttgagcccttttaactacatcccgtgtgagcaccagtggagggct
gcatggatcgctacattatcagcctggatctgtctcatctctattctcaggggactggac
gtggtcggaatatactttgtcatgttggagcaagtgttcatgtctttattcaagatatct
ctggtactggtcgtctttctaatagccttttcccaagcattttatatcaccatgtcacaa
actgcgggatttcagccaggcgagttcttcccgctgactgtgctttctatgacaatcgga
gagataaacttcatagacaactttatgagtggtagcaatgcagcgttctactacgacaat
ctcatcttgttttttctcttcgctctgatcatgccgatttctctcatgaacttactgatt
ggggttgctgttggtgataccgaagctgttaaaaagaaggcctatatgaccagattgtcc
atccagattgacttcttgagcaacacagaaacaaccttccccagatctcttcagaaaaga
ttttataaaagaagccacaccgttatgccaaacaagaacatgtattcaaaatttaatagg
ttctatgaaaatttgtttggtgaacggcgaaacaaccaagcgtttataagcgaggagaag
ccagactacgtaacagaaaacgtaaaaaagttacaggaggatgtgcgcaagaccaaatta
caacttgcacaggcgacatcacttcagaaacagtctctggagttattgaagcagatgtgt
gagcagttacatgtccgttataccctggataatgtctctctggcagagtctcacaggacg
gaaatccacagcaggattgaataa
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