Ostrea edulis (European flat oyster): 125668200
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Entry
125668200 CDS
T09123
Name
(RefSeq) laminin subunit alpha-2-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04512
ECM-receptor interaction
oed04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125668200
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125668200
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_2
Laminin_G_1
Laminin_N
Laminin_B
Laminin_G_3
Laminin_II
3keto-disac_hyd
F5_F8_type_C
TS_C
FAP206
Motif
Other DBs
NCBI-GeneID:
125668200
NCBI-ProteinID:
XP_048757988
LinkDB
All DBs
Position
4:37544034..37615692
Genome browser
AA seq
3211 aa
AA seq
DB search
MGRFICGILTTKMIIVTCFLFVSWMLILPVIKCQDDVGLFPNILNLATRSTISVNATCGE
EKSEVFCKLVDHVKIFPYRNSHCDICDARSQDERRRHPITNAINGRNSWWQSPTLTNGAL
HNYVTITLDLKQVYQVAYVIVKAANSPRPGNWILERSIDGITYQPWQYFGIRNRDCKKKY
GIKASRRIPTYLRDDEVICTTKYSKIYPLENGEIFISLINGRPGVKKPSPTLLEFTSARY
VRLRLQRIRTLNADLMTFRSTSDLKFIDPFVTRRYFYSIKDISIGGQCICYGHASSCKPR
PNTDRLYCECKHNTCGNNCEKCCEFYYQKPWQPGNNGLKCEKCNCHGHSMECVYNATVDA
MSLSLNSAGEYDGGGVCIDCKDYTAGINCEQCIDGYYRPLGETPYSRFPCRPCRCDVTLG
STGKCVLDDSMMSEGKRPGDCICKETYGGPTCQECAFGYYGYPYCKPCPCNGAGTVNSQQ
CSGNCVCKANVEGFKCDRCKRGFFNLHKNNPVGCMPCFCFGVSSVCQSANLGLIKIPGGV
GDMSDGMSGWSVTSVSINGFTYFIQKNLEGWLVYRAYPANQNSLNPTENVVVYYWQAPLK
YLRNRLTSYGGNLRYTVKYETDRTVPYQRHIYGVDVIIQSGNMTIVNGKSYLRENVQEER
TVTLNETSWFQLVKNDRYETLQPITKKKFMIFLFNIERLLIRATYHSAQNTVYLRDVTMD
AVSALSNSSATLKTVEKCSCPRGYQGLSCEECESGYRRVGNKLYGGMCLPCNCNNHAERC
DINTGKCNNCLHFTTGENCDQCLPGYYGDPRRGTEDDCKPCACPLLETTNQFSPTCQLIP
RVGNYDNYRCDKCAVGYVGDRCERCDTGYYGDPTKVDGMCRPCSCGGNIDTGNPQSCDRV
TGECLRCLNNTEGPNCQRCVEGYYGTAYNGDCKACNCDLNGSVNSSCDQYSGRCICKDRF
YGRRCDQCQPGYGNVEELCVPCDCDPQGSRGSVCESFSGQCFCNVGVTGRRCDKCLPGYY
GFSFRGCEDCRCNDHGTNQTDTCDDVTGVCNCLPNVTGSRCNTCKENFWGLATGNGCSPC
ECDRLGSVYLQCDQRTGQCTCKTGVDGQHCNQCRKGYYGFSISGCKRCQPCDKPGHVCDS
ITGQCVCPPLTTGPLCDKCQPNTWGYDSITGCKPCNCDLRTSESRQCDLITGQCTCKADY
TGNRCEKCLPGFYNHPNCQLCLCSADGTDSSNCDNSTGICQCDNRGQCPCKVNVETRTCT
RCRAGSFSLHKTNPYGCTECFCFERSSRCEQVPYIWKKVTIPDRSVSFDPRVTDKVSLKY
KSYVIIPHNSTWAAIPKFLASKPIYWSLPDSYLGDLTLSYNGKMRLEVQYKSDSGSSARA
DSSPDIVVVGNNFQMTYRTVIPWSLSGERSIVVKFHPTGWKVVGFGDATRSFMMIVLQNV
TDIYIKAAPDDSARFTMLTSVSLDSAQPGNGSTDNPALGVEICQCLEQYSGLSCQDPADG
YYRLRHNLTADLSQPIRVIGHVVPCDCHRHSDICDRETGVCKNCQHNTTGVHCEKCRPGF
YGDATRGSSGDCQPCICPTIENNFSSSCEIRRGQLICTNCTEGYIGIRCESCAEGYYGNP
RQPSGKCQPCKCNPQGSVSTICNARGQCQCLPGITGDKCDGCQPRYAVEDGQCVSCDEGC
TADLMSELDDLRNMTLQVNLTGKLPVPWNELWKIKNETDLLKDELETIRNAELGHLKNQT
RDIEKEAQDLLTRSRRAKLKAGPLEEKAVTLKKNATDLEVDLNNTVKDMKEFVEKLVDIV
QSLFHNKSGINVTDALEKVRAILKDIKDRDFSKNLQRTLDENKLSEKLSETILDMRNTLV
NTSGVMEEIQAIMEKLMDLQKHSNESQSQSDEVLNMINNIVRKQNQTEDLLVDVDLVHDN
TVKILGDGHQFNIESAGELNQAKDNIKDIERKASIFDQILPELRKKVNSRSQITEAEAKV
RAAESHARGLSDYAEKLEREFEKTKADAADPLKAAQVYSNIVKAVNEAEEAAKRAIKAAE
DSIQIAGVKNITDEVSRSLNRSRELLKQASKTLSKVPGLDKHLNTLNEDLLRVEKEQGII
KQGHADIKEALDQLPKDLGDRTVKVSNNVDKTADDLETLEETVGNVDSNIKNDLIPKFNR
IQDVSFDGIFESIENSIDTAAKNVKKIGDIVEGVESAANRSMTAESRLNDKLKMLRDNIK
QARAQAEKVKVSLSASGQCVRSYHSKSVPGVTNKISFSFKTNNTTTDQIILLLQRSPTEF
LALEMINAKIQFSWNVGAGVGSVTSDLPIQNEANFIRTIDKWYHVKADRLGRIGTLLVSK
LSDLNETKKVTGVSPVGRSFLKLDENSELYVSGVPFGINRSKELHLFQRSKELSSSANFS
GCMNEMYIDDKKIGLHNFKTSTEQGCWGCRNVPTATAEQTGTFHFDGFGYSAKPQIRSYR
STEFYIKMEFKTFWRDAILLFTGNNKTGDFLYVGLQDQKVVLQIYTGGRSYLSLSSNFAY
NNNKWHTVVSERQDLTAYLQVDGTDMKYLTAPGSNTGLEMKGRPLYFGGIPESYDLQPFL
KWGNINRTGFLGCLRQVQLQTFAQDLLTGETVGVTNGCPDEGYRTIGFYGNGFAKYTAAS
MLLDTADVSLSFRTTQKDALLLLAYDNDQRNFYSIVLSNGKVEGRFSTNSLPKKITTSKL
FNDGQLHNVAIQKVGNRITVYVDDEEQLEEVTLQRKEVSVDHLYIGGVINLNFPQGQAMA
ANTQGLEGCVSDVIINQKILNLNTPLQFERADIGRCRLPTNGVPVGLEDAQTSKKKTTTT
TTTSTTPTTTKVPTSAATTSIAPNSCAQTPDLQQNIFSLIFGNSEKSHGKIVIDPAEVQE
SFEISFDFRTFYDDGAVFLLTNKNNTKYVAAQIRDGSVSVYWTNNGGKAKKFISSKVVTN
GQWHTAIISKDRRRISLVVDGKLEMDKRKITKKLSVISPLIVGSIMDISISNNDMVKHSL
RGCMKNFKVNAKSIMIADATEVQGVTTCYINMEPGVFMDKNSYGVIASNYAVGREMKIEL
EFRTHKPNGVILSIADNQAVTLELHQGKLKFSVFNVALFTAESKSSESICNDQWHSLEAT
LIGNVVKLVLDGGPPQYGSSQDTARNVTTSSALFVGGVPDYAVKQIASFNQKDGTAEGFE
GCLRNFKIDSTPVDWFSLVEQENVQRTGCPY
NT seq
9636 nt
NT seq
+upstream
nt +downstream
nt
atgggtagattcatatgtggaatattaacgacaaaaatgattatagtcacctgttttctg
tttgtttcttggatgttaattttacctgtgatcaaatgccaagatgatgtaggtttattt
ccaaacatcctgaatttggcaacaaggtccaccatctctgtcaatgctacctgcggagaa
gagaagagtgaggtgttttgtaagcttgtggaccatgtcaagattttcccctaccggaat
tctcactgtgacatctgtgatgctagaagccaagatgaaagacgccgtcacccaatcact
aatgcaatcaatgggcggaactcttggtggcagagtccaaccctgacaaatggagccctg
cataattatgtcaccattacactggatcttaaacaggtttatcaagtagcttatgtaatt
gtgaaagcagccaactcgcctcgaccaggaaactggatcttagagagatcgatagatggt
attacctatcagccatggcagtattttggaatccggaatcgtgactgcaaaaaaaaatat
ggcattaaggccagccgcagaatcccaacctacctccgagatgatgaagtcatctgcaca
acaaaatactcaaaaatctaccctttagaaaacggagaaattttcatatcacttattaac
ggtagaccaggagtgaaaaaacccagcccaacattacttgagtttacatcagcccgttat
gtcagattgagattacagaggataaggacactcaatgctgaccttatgaccttcaggtca
accagtgacctcaagttcatagatccatttgtcacaaggaggtacttttattctataaaa
gatatttcaattggaggacaatgtatttgttatggtcatgcctcatcttgtaaaccaagg
ccaaacaccgacagactttattgtgaatgtaagcacaacacatgtggcaataactgcgaa
aaatgttgtgaattctactaccaaaaaccatggcaacctggaaacaatggcctaaaatgc
gaaaaatgcaattgccatggacattccatggagtgtgtgtacaatgccactgtagatgcc
atgagtctcagtctgaactcagcgggggaatatgatggaggtggtgtctgtattgactgc
aaggattatactgcaggcataaactgtgagcaatgtatagatggatattaccgcccactt
ggggaaacgccctactcacgctttccttgcagaccttgtcggtgtgatgtcacattaggg
tcaactggaaaatgtgtcctagatgactcaatgatgagtgaagggaagagacctggagac
tgtatatgtaaggaaacctatggtggcccaacctgtcaggagtgtgcctttggttactat
ggttatccctactgtaagccatgtccgtgtaatggtgcaggcacagtcaattcacagcag
tgcagtggcaactgtgtgtgcaaggccaatgttgaagggttcaagtgtgaccggtgtaag
aggggtttcttcaacctccacaagaacaacccagtaggctgtatgccttgcttctgtttt
ggagtgtcatccgtctgccagtcagcaaatctgggcttgatcaagattccaggaggggtg
ggtgatatgtctgatggaatgagcgggtggtcagttacttctgtcagcatcaatggcttt
acgtatttcatacaaaagaatctggagggctggctagtttacagagcttacccagccaac
cagaactcgctgaaccctacggagaatgttgtggtgtactactggcaggcaccactaaaa
tatcttcgcaatcggctgacatcttatggagggaatttgcgatacacagttaagtatgaa
actgatcgcactgtaccgtaccagagacacatatatggtgtagatgtgattatacagagt
ggcaatatgaccattgtgaatgggaagagttacttacgggaaaatgttcaggaggagaga
actgtgactctgaatgagacgagctggttccagttagttaaaaatgaccgttacgagacc
ctgcagccaatcacaaagaagaaatttatgattttcctttttaacatagagaggctcctg
attcgagcaacgtatcattccgcacagaacactgtgtatttacgagatgtgacaatggat
gcagtaagtgccttgtccaacagctcagcgacattgaagactgtggagaaatgttcctgt
cctcgtgggtaccagggcctctcctgtgaagagtgtgagtctgggtaccgcagagtggga
aacaagctttatggaggaatgtgtctaccgtgtaactgtaacaaccacgcagaacgatgt
gacatcaacacaggaaagtgtaacaattgcctacattttacaacgggtgaaaactgtgat
cagtgtctgcctggttactatggagaccctcgtcgaggaacagaggatgactgtaaacca
tgtgcctgcccactgctggaaacaaccaatcagttctctcctacttgtcagctgatccca
agagtgggaaactacgacaactacagatgtgacaaatgtgcagttggctatgttggagac
agatgtgaaagatgtgatactggttactatggcgatccaaccaaagtggatggaatgtgt
cggccctgttcgtgtgggggaaacattgacacgggtaacccccagagctgtgacagagtg
acaggggagtgtctgcgatgtctgaacaacacagagggcccgaactgtcagcggtgtgtg
gagggttactatggaacagcgtataatggcgactgtaaagcatgtaattgtgatctgaat
ggttctgtgaatagctcctgtgaccagtattctgggcggtgcatttgcaaggacaggttt
tatgggagacgctgtgaccaatgccagcctggctatggtaatgttgaagagttgtgtgta
ccatgtgactgtgacccccagggctcacgggggtcagtctgtgagagctttagtgggcag
tgcttctgtaatgtaggcgttactggtaggaggtgtgacaaatgtctgcctgggtactac
ggattctccttccgagggtgcgaggactgtcgttgtaatgatcacggaacaaatcagacg
gacacctgtgatgatgtcacaggtgtctgtaactgtctgcccaatgtcacaggatctcgc
tgtaatacctgcaaggagaatttctggggcctggctacgggcaatggctgctccccctgt
gaatgtgacagactggggtcagtctatttgcagtgtgaccagagaaccggtcagtgtacc
tgtaaaacaggagtggatggacaacactgcaatcagtgtagaaaaggctactacggattc
tccatcagtggttgtaaacggtgccagccctgtgataagcctggacatgtgtgtgattcc
atcactggccagtgtgtttgtccacccctgacaactggaccactatgcgataaatgtcaa
cccaatacctggggctatgacagtatcacaggatgcaagccttgcaattgtgatcttcgg
acttctgaatccagacagtgtgacctgattactgggcagtgtacctgtaaagctgattac
acaggtaacaggtgtgaaaagtgcctacctggattctacaaccatcctaattgtcagctt
tgtctgtgtagtgctgatggtactgattctagcaactgtgacaactcgacagggatctgt
cagtgtgacaacagggggcagtgtccatgtaaggtgaatgtagaaacacgtacatgtact
cgctgtcgagccggatccttcagtttacataaaaccaatccctatgggtgtacagagtgc
ttctgctttgagcggtccagtaggtgtgagcaggtcccatacatttggaaaaaggtgacg
attcctgacagaagtgtttcgtttgaccctcgtgtcacggacaaggtctccttgaagtac
aagtcctatgttatcatcccccacaattccacttgggcagctatcccaaagttcttagca
agcaaaccaatctactggagcctgccagacagctacctgggtgatctgacattatcctat
aatgggaaaatgaggcttgaagttcagtacaagtcggacagtggatcttcagctcgagca
gacagcagtccagatatcgtggtggttggaaacaacttccagatgacttacaggactgtg
attccatggtcactcagtggggagagatctattgtggtcaagttccacccaacagggtgg
aaagttgttggatttggggatgcaaccagaagtttcatgatgattgtgctacaaaatgtt
acagatatttacataaaggctgctccagatgactcagccagatttaccatgttgacctct
gtatcattggacagtgcccagccggggaatggcagtacagataacccagccctgggggtg
gaaatttgccagtgtctggagcagtactcgggactctcctgtcaggatccagcagatggc
tactacagactgagacacaacctgacagcagatctatctcagccgatccgtgtgatcggg
cacgtagtaccatgtgactgtcacaggcactctgacatctgtgacagggagacaggagtg
tgtaagaattgccagcacaatacgactggagttcactgtgagaaatgccggcctggtttc
tatggagatgcaaccagaggttcctctggcgactgtcaaccctgtatctgtccaactatt
gaaaacaattttagcagctcttgtgaaattcgtcgtggtcagctgatctgtaccaactgt
actgagggatacattgggattcgatgtgaatcgtgtgcagaaggttactatggaaacccg
cgacaacccagtggaaagtgtcagccttgtaagtgtaatccacaaggttctgtgtccact
atttgtaatgctcgcgggcaatgtcagtgtttgcctggaataacaggggataagtgtgat
ggatgtcagcccagatatgctgttgaagacggacaatgtgtctcatgtgatgaaggttgt
actgctgacctgatgagtgaactcgatgacctcagaaatatgacccttcaagtgaacctc
actggtaaacttcctgtcccgtggaatgagctctggaaaatcaaaaatgaaactgactta
ctcaaggatgaattggagaccattaggaatgctgaactgggtcatttgaaaaatcagaca
agggacattgagaaagaggcacaggacttgctcaccagatccaggagagctaaacttaag
gcaggaccattggaggagaaagctgtcacgctgaagaagaatgccacggacttagaagtc
gatctcaacaacacagtcaaagacatgaaagaatttgtggagaagttggtggatatcgtt
cagagtctcttccacaacaaaagtggaataaacgtcacagacgccttggagaaagtcagg
gccattttaaaggacatcaaagacagagatttctccaaaaatctacagagaacactcgat
gagaacaaattatcagaaaagctgtcggaaacaatattggatatgaggaacacactcgta
aatacctctggcgttatggaggaaattcaggccataatggagaaactcatggacctccag
aaacattccaatgaatcccagagtcagtcagatgaagtgttaaacatgatcaataacatt
gtcagaaagcaaaatcaaacggaggacctgttggtggatgtagaccttgtacatgataac
actgtgaagatattaggggatggccaccagttcaacatcgagtcagcaggggaactcaac
caagccaaggacaacatcaaggatatagaaagaaaagcaagcatctttgatcagattttg
ccagaactgagaaaaaaagtaaacagtagaagtcagataacagaagccgaggccaaagtc
cgagctgcagagagtcatgctaggggcctgtcagactatgctgagaagttggaaagagag
ttcgaaaaaaccaaagcagatgctgcggatcccctgaaggcagcccaagtgtacagcaat
attgtgaaggctgtgaatgaggcggaggaggccgccaaacgtgccatcaaggcggcagag
gactccatccaaattgcaggtgtgaagaatattacagatgaagtatctcgctcacttaac
cggagcagggagctgctcaaacaagccagtaaaaccctgagcaaagttccaggtctagac
aagcatttaaacactctgaatgaagatttgcttcgtgtggaaaaagaacaaggcataatc
aagcagggtcatgctgatattaaggaagcactagatcagctgccaaaagatctcggagac
aggactgtgaaggtttccaataacgtagacaagacagctgatgatctagaaaccttggag
gaaaccgttggaaatgtggatagtaacataaagaacgatcttatcccaaaatttaaccga
attcaagatgtcagctttgatggcatatttgaaagcatagaaaattcaatcgacacagca
gcgaagaacgtgaagaagataggtgacattgtggagggggtggagtcagcggcaaacaga
agcatgacagcagagtccagactcaacgacaaactcaagatgctgagggacaacatcaaa
caagctcgtgctcaagctgaaaaggtgaaggtgtctctgtcagccagcggacagtgtgtg
agatcctaccactccaagtctgtccctggggtcaccaacaaaatcagcttttccttcaag
acaaacaacactaccactgaccagatcattctgctgttacagaggtcccctacagaattt
ctagcattggaaatgatcaatgcaaagattcagttttcctggaatgttggagcaggtgtt
ggtagtgtcacaagtgacctccccattcagaatgaggctaacttcatcagaaccattgac
aagtggtaccatgtcaaagctgacagacttggaagaataggaacattattggttagtaaa
ctctcggatctgaatgaaaccaaaaaagtcactggggtgtcccctgttggccgatctttc
ctgaagctggacgagaactctgaactctatgtgtctggtgtaccatttggcataaatagg
tcaaaagaattacatctgtttcagaggtcaaaagaattgagcagctcggcgaacttctct
ggatgtatgaatgaaatgtacattgatgataagaaaattggactacataacttcaagact
tccactgaacaaggctgctggggctgcagaaatgtgccgacagccactgcggagcagacg
ggcacgttccactttgatggttttggttactccgccaaacctcagatcaggtcctacaga
agcacagaattttacatcaagatggagttcaaaactttctggagggatgctatcttactc
ttcactggaaataacaaaactggagattttctatatgttggtttacaagatcagaaagtg
gttctgcagatatatactggtggcagaagttatctttcactttccagcaatttcgcatat
aacaataacaagtggcatactgttgtgtcggagcggcaagatctgactgcttaccttcag
gtggatggtactgatatgaaatatctcactgctcctggcagtaacacagggttagaaatg
aaagggagaccactctattttggaggaattcctgaaagttatgatctgcaaccttttctg
aaatggggaaatataaatagaactggattcctaggctgccttcgacaagtccaacttcag
actttcgctcaggatctgctgaccggagaaactgtaggggtcaccaatggctgtccagat
gagggctacaggacaataggattttatggcaatggatttgccaagtacacggcagctagc
atgctgttagatacggcagatgtttcactgtccttccgaactacacagaaggacgccctc
cttctcttggcctatgataatgatcaaaggaacttctactccatagtgctatctaatggt
aaagttgaaggaagatttagtaccaacagtctccccaaaaagataacaacatccaaatta
tttaatgatggacagttgcacaatgtagccatccagaaagttggaaacaggatcactgtg
tatgttgatgatgaggaacagctggaggaagttactctacagcggaaggaagtcagtgtg
gaccatttgtatataggaggtgttattaacctcaactttccccagggacaagctatggca
gccaacacacaggggctggagggatgtgtcagtgatgtcatcattaatcaaaaaattttg
aacttgaatacccccctccagtttgaaagagcagacataggaaggtgtagattgccaact
aatggtgttccagtcggcttagaagatgcccaaacctcaaagaaaaaaactaccaccacc
accactacatcaaccacaccgacaaccaccaaagtccccacttctgcagccaccacatct
attgcaccaaattcctgtgcacagactccagatttacagcaaaatattttttcactgata
tttgggaattcagaaaaaagtcacgggaaaattgtaattgatcctgcagaggttcaagaa
tcatttgagatctcctttgactttcgtacattttatgacgatggggctgtatttctgctg
accaataagaacaacacaaaatatgtcgcagcccaaataagagacggatctgtttcggtg
tactggacaaataatggtggaaaggcaaaaaagttcatctcctcaaaagttgtaacaaat
ggacagtggcacacagccatcatttctaaagatcgacgtagaatcagccttgtggtggat
gggaagttggaaatggataaacggaagattaccaagaaattatccgtaatatctcctcta
attgttggaagtattatggatatatctattagtaacaatgatatggtaaagcacagtctg
aggggttgtatgaagaactttaaagttaacgccaagagtataatgatagccgatgccaca
gaggtacagggagtcaccacatgctatattaacatggaacctggagtgttcatggataaa
aactcctatggagtcatagccagtaattatgcagtcggtcgagaaatgaagatcgagtta
gaattccgaactcacaaacccaatggtgtaattctgtctatcgcagacaaccaggcagtt
actctagagcttcaccaaggaaagttgaaattctccgtgttcaatgtcgccctattcaca
gcagagtctaaaagctctgagagcatctgtaatgatcagtggcactctttggaagccaca
ctgattgggaatgtggtgaagctggttctagatggtggtccccctcaatatggcagcagc
caggatacagccagaaatgtcaccacctcttctgccctgtttgtgggaggggtaccagac
tatgcagttaagcagattgcctcctttaaccagaaagatggaacagccgagggatttgag
ggctgtttacgcaacttcaagatagactccacccctgtagactggttctcattggtagaa
caggaaaatgttcagcgcactggatgcccttattaa
DBGET
integrated database retrieval system
