Ostrea edulis (European flat oyster): 125668366
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Entry
125668366 CDS
T09123
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oed03009
]
125668366
03036 Chromosome and associated proteins [BR:
oed03036
]
125668366
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125668366
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
Helicases
125668366
Chromosome and associated proteins [BR:
oed03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125668366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
DD_DDX21-DDX50
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125668366
NCBI-ProteinID:
XP_048758389
LinkDB
All DBs
Position
4:88123142..88150407
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AA seq
749 aa
AA seq
DB search
MVKVKIEDTVEEPVPKVKKGKEKISKEKTKKEKKVSKAGDKKKQSEKELSENGHEELATE
KEEKKKSKKDRKSTDRTEESSTKSKDKKKKSKKDEKAAINGHSVNSDVKTEAVDSENDGN
TVNSGTNVTAPDKENVIKSEKTEEEILGDFSNFRISDSTVEKLKKRSINYLFPIQYKTFN
HVYNGEDVIGQARTGTGKTLSFALPLVEVLQKNKTQRIPHCPKVIAMVPTRELAKQVSDV
FESISDRLNVACFYGGTPYEKQMRAIRSGIDVLVGTPGRIKDHIEKGNLDFRGVRHVVLD
EVDRMLDMGFADDVETIISSAYKTENGENPQTLLFSATLPSWVHETARKYMREDNLAKIS
LVNSQENRTSTTVQHLAIRSSFWDRPAVIGDVLQVYSGRNGRAIIFNETKREADDLSCSE
YIKQDAHVLHGDIPQEKRETVLKGFRDGKFNVLLTTDVAARGLDIPEVDLVIQCNPPEDV
DSYIHRAGRTGRAGKNGVCICFYKPEEEMKLGNVEYRAKIKFRRVAGPTKQDIIRASVDD
AVRSIEGVASETLDYFRSSAQELITDRGAEDALAAALALISGSTKITSRSMLSSKEGFTT
FYLRTNNEIQRNNYIYRALERCLPKDLVEKLRWLTLCKDRMGAVFDFPSDCEAQVLDYWT
DGKYDTLCKATELPDLQERERPFSSGSRGGRGRGGGGRGFGGGRGRGGGRGFSDRTFGGS
NRGGFNGRGGFKRFADRSGDFPQNKRIRF
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaagtaaagatagaggacacagtcgaggaaccagttccaaaagttaaaaagggc
aaagaaaaaatttcaaaggagaaaactaagaaagaaaagaaagtgtcaaaggctggagat
aaaaagaaacaatctgaaaaagaattatcagaaaatgggcacgaagagttagccacagag
aaggaagagaaaaagaaatctaaaaaagaccgaaaatcgacagacaggacagaagagagt
tcaaccaaaagcaaagataaaaagaagaaatcgaagaaggatgaaaaagcagccataaat
gggcacagtgtaaattcagatgttaagactgaagcagtggattctgagaatgatggtaac
actgtgaatagtggtactaatgtaacagctccggacaaggagaatgtcatcaaatcggag
aaaacggaggaagagatcctaggggatttctcaaacttcagaatctcagattccacagtg
gaaaagctcaaaaaaagaagtataaattatctgtttcctatacagtacaagacgtttaat
catgtgtacaatggggaggatgtcattggtcaagcccgtactggaacaggaaagacactt
tcctttgcattacctcttgtggaagttttacagaagaacaaaacacagagaatacctcat
tgtccaaaggttattgccatggtaccaaccagagaacttgctaaacaggtgtcagatgtg
tttgagtcaatcagcgaccgactgaacgtggcctgtttctatggtggaactccgtatgag
aagcagatgagagccatcagatcagggattgatgtcctggtggggacacctggccgaatc
aaagaccacatagagaagggcaacctggacttccgtggtgtgcggcatgttgttctggat
gaggtggacagaatgttggacatggggtttgcagatgatgttgagaccattatatcttct
gcttataaaactgagaatggagagaaccctcagactctgttattttcagcaactcttccc
tcctgggttcatgaaacagccagaaagtacatgagagaggacaacctggcgaaaatctct
cttgttaacagccaggaaaatcgaacttccacgacggtgcagcatttggcaattcgcagc
agtttctgggaccgtccagcagtgattggagacgtccttcaagtgtacagtggtaggaat
ggccgtgccattatattcaatgagaccaagagggaggcagacgacctgtcatgcagtgaa
tacatcaaacaggacgcacacgtactgcacggcgacattccacaggagaagagagagacc
gttctgaagggtttccgagacgggaagtttaatgtccttttgaccacagatgtagctgcc
cgaggactggacattcccgaggtggatttggttatccagtgtaatcctccggaagacgtg
gactcctacatccatcgtgccggacgaacgggtcgtgctgggaaaaatggagtctgcatc
tgcttctataaacctgaagaagaaatgaaactggggaatgtggagtacagagctaaaatc
aagttccgacgggttgctggacccacgaagcaggatattattcgggcatccgtagacgat
gcagtgagatctatagaaggggtagcatcagagacactggactattttcgttcatcagcg
caggagttaataacagaccgaggtgcagaggatgctttggctgctgctcttgccttgata
tcgggctcaactaaaattacatcgcgctctatgttgtcatccaaagagggattcacgaca
ttttacctgagaacgaataatgaaattcagcggaacaactacatataccgtgcattagaa
agatgtctgccaaaagacctggtggaaaaacttcgatggctcactttatgcaaagatagg
atgggagccgtgtttgactttccttctgactgtgaagctcaagtcttggattattggaca
gatgggaaatacgacaccttgtgcaaggccactgaactcccagatctgcaagagagagag
agaccgttttcctcggggagtcgtggagggagggggagaggaggaggcggtagaggcttc
ggcgggggtcggggaaggggagggggtagaggattttcagacaggacatttggaggctca
aacaggggagggtttaatgggagagggggatttaaaagatttgccgacaggagtggggac
tttccacaaaacaaaaggattcgattttga
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