Ostrea edulis (European flat oyster): 125668525
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Entry
125668525 CDS
T09123
Name
(RefSeq) uncharacterized protein LOC125668525 isoform X2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125668525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oed03041
]
125668525
03009 Ribosome biogenesis [BR:
oed03009
]
125668525
Enzymes [BR:
oed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125668525
Spliceosome [BR:
oed03041
]
Complex A
U1 snRNP components
U1 related factors
125668525
Complex B
125668525
Ribosome biogenesis [BR:
oed03009
]
Eukaryotic type
Pre-60S particles
Helicases
125668525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Helicase_C_2
P-loop_SecA
NPHP3_N
PRIMA1
Motif
Other DBs
NCBI-GeneID:
125668525
NCBI-ProteinID:
XP_048758723
LinkDB
All DBs
Position
4:8540210..8550610
Genome browser
AA seq
681 aa
AA seq
DB search
MSYRDRMFDSSGRSDRKGFGGSSGLPKAFGSSKFGDRGGPRSGGRGGGGGGRFGMDRGGM
RGGKMGKGHQPGENLRKPRWDMSRLPKFEKNFYMEHPDVSGRTQMDIDQFYNEHKVTVKG
LNIPKPIFTFEEGGFPDYVMGSFRRLEWTRPTSIQTVSWPVAMSGRDVVGIAQTGSGKTA
GFILPSIVHINHQPHLQPHDGPIVLVLVPTRELAQQVQEVANEFGHASRIRNVCVYGGAP
KGPQIRDLERGAEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKVV
EQIRPDRQTLMWSATWPKDVRKLAEDFLKDYIQLNIGALQLSANHNILQIIDVCDESEKE
FKLTKLLEEIMQEKENKTLIFTETKRKADDITRRMRRDGWPMMCIHGDKSQQERDWVLNG
FRSGQTPILIATDVASRGLDVGDIKFVINFDYPSSSEDYVHRIGRTARAGQTGTAYTFFT
PDNTKQANDLISVLQEAKQVVNPKLVSLSQNARFGGGRKSRFDDRRDKFGGRDFGRGGGR
DRGGSGRGGMGSRGGFGGRGGSRGGTGGSRGSSSGFNTRSGGSRFSDRGSSGGGSRGYGG
GSQSQGGGYGGSQNYSQNGTASSGSYGQQNGYGNQQRSSSSSTGNDWSNQMAYMFNSWSG
QQQSSGQPPLPTGNPPPPPPM
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacagagacagaatgtttgattcttctgggcgatcagacagaaaaggatttgga
ggtagtagtggtttgccaaaagcctttggttcatcaaagtttggagatagaggagggcct
agaagtggaggaagaggtggtggaggaggtggaagatttggaatggaccgaggtggaatg
cgtggtggtaaaatgggtaaaggacatcaaccaggagaaaatctacgcaagccaaggtgg
gatatgtcacgactgccaaagttcgagaagaatttctacatggaacatcctgatgtatcc
ggcagaacacagatggatattgatcaattttacaatgaacacaaagtcacagtcaaggga
ttgaatattccgaagccaatctttacatttgaagaaggtggattcccagattatgtgatg
ggctcatttcggcgtttggaatggacaaggccaactagtatccagactgtaagttggcct
gtagctatgtcaggaagagatgtggtggggattgcccagacagggtctgggaagacagcc
gggtttatactgccatcaatagttcacattaatcatcagccacacttgcaacctcatgat
ggaccaattgttcttgtactggttccaacgcgagaacttgcacagcaagtacaggaagtt
gccaatgagtttggtcacgcctccagaattagaaatgtatgtgtttatggtggtgcccct
aaaggaccacagatcagggatttagaaagaggggcagaaatctgcatagccacacctggt
aggcttattgattttttggaggcagggaagacaaatcttagaagatgtacttatctagtg
ctggatgaagctgaccggatgttggacatgggatttgagccccagatcagaaaagttgtg
gaacaaattcgacctgacagacaaaccttgatgtggagtgccacttggcctaaagatgtc
cgaaagttggcagaggatttcctgaaggattacattcaactcaacattggggctcttcaa
cttagtgcaaatcacaatattctgcaaatcattgatgtttgtgatgaaagtgaaaaggaa
ttcaaactgactaaactattagaagaaatcatgcaagagaaagaaaacaagacacttatc
ttcacagaaacgaaaagaaaagcagatgatatcaccagaagaatgagaagagatggatgg
ccaatgatgtgtatacatggagacaaatctcaacaagagagagactgggttttaaatggt
ttccgttcaggacagacaccaattttgatagccactgatgttgcctctagaggattagat
gttggagacatcaaatttgtcataaactttgactacccctcctcatcggaggactatgtc
catcgtattggacgtactgccagagcaggacagacaggaactgcctacacattcttcact
ccagacaataccaaacaagccaatgatctcatctctgttcttcaagaagccaagcaagtg
gtcaatccaaaacttgtgtcactcagccagaatgccagatttgggggaggacgaaaatcc
agatttgacgataggagagacaaatttggtggaagagactttggtcgaggaggtggacgt
gacaggggtggatcagggaggggtgggatgggttctaggggaggctttgggggtcgtggg
ggaagtagagggggtactgggggttcacgtggaagttcatcggggttcaacacaaggtca
ggtggcagtcgattctcggatagaggtagctctggtggtggcagcagagggtatggggga
gggtcccaaagtcagggcggtgggtatggggggagtcagaattactcccaaaatggcaca
gcatcatcaggtagttatggacagcaaaatggatatggaaatcagcagagaagtagcagt
agcagcactggaaatgactggtccaaccaaatggcctacatgtttaatagttggagtggt
caacagcaatcttcaggacagcctccacttcccacaggaaatccacctcccccaccccct
atgtaa
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